RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TNKSO95271 1327 aa12□□□□□ -0.49
SRP54-208ENST00000555557 LAMB1P07942 1786 aa12□□□□□ -0.49
SRP54-208ENST00000555557 KLF18A0A0U1RQI7 1052 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 TSPY3P0CV98 308 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 TSPY8P0CW00 308 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 PDIA3P30101 505 aaKnown RBP11.99□□□□□ -0.49
SRP54-208ENST00000555557 SHMT1P34896 483 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 CCT2P78371 535 aaKnown RBP11.99□□□□□ -0.49
SRP54-208ENST00000555557 CUL4AQ13619 759 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 WTAPQ15007 396 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 SEC23AQ15436 765 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 ANGEL2Q5VTE6 544 aaKnown RBP11.99□□□□□ -0.49
SRP54-208ENST00000555557 FKBP1CQ5VVH2 108 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 NFXL1Q6ZNB6 911 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 IQCA1Q86XH1 822 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 ENAHQ8N8S7 591 aaPredicted RBP11.99□□□□□ -0.49
SRP54-208ENST00000555557 ZSCAN31Q96LW9 406 aaPredicted RBP11.99□□□□□ -0.49
SRP54-208ENST00000555557 ZNF287Q9HBT7 754 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 IL17RBQ9NRM6 502 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 ATRNL1Q5VV63 1379 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 ERICH2A1L162 156 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 GLTPD2A6NH11 291 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 AKR1B1P15121 316 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 RXRAP19793 462 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 SART3Q15020 963 aaKnown RBP11.99□□□□□ -0.49
SRP54-208ENST00000555557 MIGA2Q7L4E1 593 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 FAM83AQ86UY5 434 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 ZNF784Q8NCA9 323 aaPredicted RBP11.99□□□□□ -0.49
SRP54-208ENST00000555557 MYL10Q9BUA6 226 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 EHD4Q9H223 541 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 SH2B1Q9NRF2 756 aaPredicted RBP11.99□□□□□ -0.49
SRP54-208ENST00000555557 PGAP2Q9UHJ9 254 aa11.99□□□□□ -0.49
SRP54-208ENST00000555557 LIFRP42702 1097 aa11.98□□□□□ -0.49
SRP54-208ENST00000555557 EVCP57679 992 aa11.98□□□□□ -0.49
SRP54-208ENST00000555557 SCRN1Q12765 414 aa11.98□□□□□ -0.49
SRP54-208ENST00000555557 SHROOM1Q2M3G4 852 aaPredicted RBP11.98□□□□□ -0.49
SRP54-208ENST00000555557 PRAMEF18Q5VWM3 479 aa11.98□□□□□ -0.49
SRP54-208ENST00000555557 FOXP4Q8IVH2 680 aaPredicted RBP11.98□□□□□ -0.49
SRP54-208ENST00000555557 CCDC144CPQ8IYA2 1237 aa11.98□□□□□ -0.49
SRP54-208ENST00000555557 TRIM34Q9BYJ4 488 aa11.98□□□□□ -0.49
SRP54-208ENST00000555557 DEFB129Q9H1M3 183 aa11.98□□□□□ -0.49
SRP54-208ENST00000555557 NCOA5Q9HCD5 579 aaKnown RBP11.98□□□□□ -0.49
SRP54-208ENST00000555557 ADARB2Q9NS39 739 aaKnown RBP11.98□□□□□ -0.49
SRP54-208ENST00000555557 GGA3Q9NZ52 723 aa11.98□□□□□ -0.49
SRP54-208ENST00000555557 SWAP70Q9UH65 585 aa11.98□□□□□ -0.49
SRP54-208ENST00000555557 CCDC69A6NI79 296 aa11.98□□□□□ -0.49
SRP54-208ENST00000555557 PPFIA3O75145 1194 aa11.98□□□□□ -0.49
SRP54-208ENST00000555557 TNNI2P48788 182 aa11.98□□□□□ -0.49
SRP54-208ENST00000555557 IFIT1BQ5T764 474 aaKnown RBP11.98□□□□□ -0.49
SRP54-208ENST00000555557 ZNF274Q96GC6 653 aaPredicted RBP11.98□□□□□ -0.49
SRP54-208ENST00000555557 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.98□□□□□ -0.49
SRP54-208ENST00000555557 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
SRP54-208ENST00000555557 GOLGA8BA8MQT2 603 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 MPHOSPH10O00566 681 aaKnown RBP11.97□□□□□ -0.49
SRP54-208ENST00000555557 PFKFB2O60825 505 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 TNFAIP1Q13829 316 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 RRP1BQ14684 758 aaKnown RBP11.97□□□□□ -0.49
SRP54-208ENST00000555557 RCSD1Q6JBY9 416 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 APOA5Q6Q788 366 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 DLK2Q6UY11 383 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 SGMS1Q86VZ5 419 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 METTL16Q86W50 562 aaKnown RBP11.97□□□□□ -0.49
SRP54-208ENST00000555557 MICU3Q86XE3 530 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 CLEC10AQ8IUN9 316 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 NEDD1Q8NHV4 660 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 GTF3C6Q969F1 213 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 L3MBTL3Q96JM7 780 aaPredicted RBP11.97□□□□□ -0.49
SRP54-208ENST00000555557 TEPSINQ96N21 525 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 MTA3Q9BTC8 594 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.97□□□□□ -0.49
SRP54-208ENST00000555557 SLC12A7Q9Y666 1083 aa11.97□□□□□ -0.49
SRP54-208ENST00000555557 ZC3H4Q9UPT8 1303 aaKnown RBP11.96□□□□□ -0.49
SRP54-208ENST00000555557 GDF11O95390 407 aa11.96□□□□□ -0.49
SRP54-208ENST00000555557 CERKLQ49MI3 558 aaPredicted RBP11.96□□□□□ -0.49
SRP54-208ENST00000555557 CHMP4CQ96CF2 233 aa11.96□□□□□ -0.49
SRP54-208ENST00000555557 CEP95Q96GE4 821 aa11.96□□□□□ -0.49
SRP54-208ENST00000555557 STX8Q9UNK0 236 aa11.96□□□□□ -0.49
SRP54-208ENST00000555557 POTECB2RU33 542 aa11.96□□□□□ -0.5
SRP54-208ENST00000555557 ZBTB43O43298 467 aa11.96□□□□□ -0.5
SRP54-208ENST00000555557 EPHX2P34913 555 aa11.96□□□□□ -0.5
SRP54-208ENST00000555557 JAG1P78504 1218 aa11.96□□□□□ -0.5
SRP54-208ENST00000555557 NBPF12Q5TAG4 269 aaPredicted RBP11.96□□□□□ -0.5
SRP54-208ENST00000555557 TATDN1Q6P1N9 297 aa11.96□□□□□ -0.5
SRP54-208ENST00000555557 TMTC2Q8N394 836 aa11.96□□□□□ -0.5
SRP54-208ENST00000555557 NUP133Q8WUM0 1156 aa11.96□□□□□ -0.5
SRP54-208ENST00000555557 INTS4Q96HW7 963 aaKnown RBP11.96□□□□□ -0.5
SRP54-208ENST00000555557 TCP11L1Q9NUJ3 509 aa11.96□□□□□ -0.5
SRP54-208ENST00000555557 COL2A1P02458 1487 aaPredicted RBP11.95□□□□□ -0.5
SRP54-208ENST00000555557 SIPA1L1O43166 1804 aa11.95□□□□□ -0.5
SRP54-208ENST00000555557 JAK2O60674 1132 aa11.95□□□□□ -0.5
SRP54-208ENST00000555557 CDC27P30260 824 aa11.95□□□□□ -0.5
SRP54-208ENST00000555557 ADD1P35611 737 aaKnown RBP11.95□□□□□ -0.5
SRP54-208ENST00000555557 METAP2P50579 478 aaKnown RBP eCLIP11.95□□□□□ -0.5
SRP54-208ENST00000555557 DGKHQ86XP1 1220 aa11.95□□□□□ -0.5
SRP54-208ENST00000555557 ZNF654Q8IZM8 581 aa11.95□□□□□ -0.5
SRP54-208ENST00000555557 HERC5Q9UII4 1024 aaKnown RBP11.95□□□□□ -0.5
SRP54-208ENST00000555557 MTMR7Q9Y216 660 aa11.95□□□□□ -0.5
SRP54-208ENST00000555557 CTDNEP1O95476 244 aa11.94□□□□□ -0.5
SRP54-208ENST00000555557 DDIT3P35638 169 aa11.94□□□□□ -0.5
SRP54-208ENST00000555557 EAPPQ56P03 285 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms