RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 CTDSPL2Q05D32 466 aa20.77■□□□□ 0.92
PSEN1-212ENST00000555254 PICALMQ13492 652 aa20.77■□□□□ 0.92
PSEN1-212ENST00000555254 CTR9Q6PD62 1173 aa20.77■□□□□ 0.92
PSEN1-212ENST00000555254 SPRYD3Q8NCJ5 442 aa20.77■□□□□ 0.92
PSEN1-212ENST00000555254 STAG1Q8WVM7 1258 aa20.77■□□□□ 0.92
PSEN1-212ENST00000555254 TMX3Q96JJ7 454 aa20.77■□□□□ 0.92
PSEN1-212ENST00000555254 FAM198AQ9UFP1 575 aa20.77■□□□□ 0.92
PSEN1-212ENST00000555254 TRPM7Q96QT4 1865 aa20.77■□□□□ 0.92
PSEN1-212ENST00000555254 TBC1D10CQ8IV04 446 aa20.76■□□□□ 0.91
PSEN1-212ENST00000555254 ZFPM1Q8IX07 1006 aa20.76■□□□□ 0.91
PSEN1-212ENST00000555254 FAM151AQ8WW52 585 aa20.76■□□□□ 0.91
PSEN1-212ENST00000555254 SH2B1Q9NRF2 756 aaPredicted RBP20.76■□□□□ 0.91
PSEN1-212ENST00000555254 USP2O75604 605 aaPredicted RBP20.75■□□□□ 0.91
PSEN1-212ENST00000555254 RHBDL3P58872 404 aa20.75■□□□□ 0.91
PSEN1-212ENST00000555254 EXOSC10Q01780 885 aaKnown RBP20.75■□□□□ 0.91
PSEN1-212ENST00000555254 Q6ZUG5 572 aa20.75■□□□□ 0.91
PSEN1-212ENST00000555254 MAPKAPK5Q8IW41 473 aa20.75■□□□□ 0.91
PSEN1-212ENST00000555254 ZSCAN29Q8IWY8 852 aaPredicted RBP20.75■□□□□ 0.91
PSEN1-212ENST00000555254 CHMP4CQ96CF2 233 aa20.75■□□□□ 0.91
PSEN1-212ENST00000555254 WBP1LQ9NX94 342 aa20.75■□□□□ 0.91
PSEN1-212ENST00000555254 WDR19Q8NEZ3 1342 aa20.75■□□□□ 0.91
PSEN1-212ENST00000555254 PRC1O43663 620 aa20.74■□□□□ 0.91
PSEN1-212ENST00000555254 WDHD1O75717 1129 aaPredicted RBP20.74■□□□□ 0.91
PSEN1-212ENST00000555254 IREB2P48200 963 aaKnown RBP20.74■□□□□ 0.91
PSEN1-212ENST00000555254 PDE4BQ07343 736 aa20.74■□□□□ 0.91
PSEN1-212ENST00000555254 RRP12Q5JTH9 1297 aaKnown RBP20.74■□□□□ 0.91
PSEN1-212ENST00000555254 MIGA2Q7L4E1 593 aa20.74■□□□□ 0.91
PSEN1-212ENST00000555254 CCDC102AQ96A19 550 aa20.74■□□□□ 0.91
PSEN1-212ENST00000555254 TCEANC2Q96MN5 208 aa20.74■□□□□ 0.91
PSEN1-212ENST00000555254 IDI2Q9BXS1 227 aa20.74■□□□□ 0.91
PSEN1-212ENST00000555254 ENTPD3O75355 529 aa20.73■□□□□ 0.91
PSEN1-212ENST00000555254 HSPA8P11142 646 aaKnown RBP20.73■□□□□ 0.91
PSEN1-212ENST00000555254 NT5C2P49902 561 aa20.73■□□□□ 0.91
PSEN1-212ENST00000555254 SART3Q15020 963 aaKnown RBP20.73■□□□□ 0.91
PSEN1-212ENST00000555254 MB21D2Q8IYB1 491 aaPredicted RBP20.73■□□□□ 0.91
PSEN1-212ENST00000555254 ESR2Q92731 530 aa20.73■□□□□ 0.91
PSEN1-212ENST00000555254 SLC10A4Q96EP9 437 aa20.73■□□□□ 0.91
PSEN1-212ENST00000555254 NBPF3Q9H094 633 aa20.73■□□□□ 0.91
PSEN1-212ENST00000555254 ZNF287Q9HBT7 754 aa20.73■□□□□ 0.91
PSEN1-212ENST00000555254 DDX4Q9NQI0 724 aaKnown RBP20.73■□□□□ 0.91
PSEN1-212ENST00000555254 SSC5DA1L4H1 1573 aa20.72■□□□□ 0.91
PSEN1-212ENST00000555254 B4E1Z4 1266 aa20.72■□□□□ 0.91
PSEN1-212ENST00000555254 LDLRAD1Q5T700 205 aa20.72■□□□□ 0.91
PSEN1-212ENST00000555254 C12orf60Q5U649 245 aa20.72■□□□□ 0.91
PSEN1-212ENST00000555254 STK11IPQ8N1F8 1099 aa20.72■□□□□ 0.91
PSEN1-212ENST00000555254 HOOK2Q96ED9 719 aa20.72■□□□□ 0.91
PSEN1-212ENST00000555254 TMEM87BQ96K49 555 aa20.72■□□□□ 0.91
PSEN1-212ENST00000555254 CWC22Q9HCG8 908 aaKnown RBP20.72■□□□□ 0.91
PSEN1-212ENST00000555254 SAP30BPQ9UHR5 308 aaKnown RBP20.72■□□□□ 0.91
PSEN1-212ENST00000555254 MYH2Q9UKX2 1941 aa20.72■□□□□ 0.91
PSEN1-212ENST00000555254 ERICH2A1L162 156 aa20.71■□□□□ 0.91
PSEN1-212ENST00000555254 MKRN3Q13064 507 aaKnown RBP20.71■□□□□ 0.91
PSEN1-212ENST00000555254 TTC6Q86TZ1 520 aa20.71■□□□□ 0.91
PSEN1-212ENST00000555254 CLMNQ96JQ2 1002 aa20.71■□□□□ 0.91
PSEN1-212ENST00000555254 ZIC5Q96T25 663 aa20.71■□□□□ 0.91
PSEN1-212ENST00000555254 SLKQ9H2G2 1235 aaPredicted RBP20.71■□□□□ 0.91
PSEN1-212ENST00000555254 FOXD4L1Q9NU39 408 aa20.71■□□□□ 0.91
PSEN1-212ENST00000555254 PAPPA2Q9BXP8 1791 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 ECM29Q5VYK3 1845 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 CYP2D7A0A087X1C5 515 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 FAM155AB1AL88 458 aaPredicted RBP20.7■□□□□ 0.9
PSEN1-212ENST00000555254 KDM4AO75164 1064 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 CYP2D6P10635 497 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 NOGQ13253 232 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 CUL4AQ13619 759 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 TOB2Q14106 344 aaPredicted RBP20.7■□□□□ 0.9
PSEN1-212ENST00000555254 DCAF15Q66K64 600 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 CHST3Q7LGC8 479 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 RASAL3Q86YV0 1011 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 FBXL16Q8N461 479 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 BRF1Q92994 677 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 INTS4Q96HW7 963 aaKnown RBP20.7■□□□□ 0.9
PSEN1-212ENST00000555254 CSRNP1Q96S65 589 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 LARP6Q9BRS8 491 aaKnown RBP20.7■□□□□ 0.9
PSEN1-212ENST00000555254 MTA3Q9BTC8 594 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 LRRC2Q9BYS8 371 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 NAP1L2Q9ULW6 460 aaPredicted RBP20.7■□□□□ 0.9
PSEN1-212ENST00000555254 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.7■□□□□ 0.9
PSEN1-212ENST00000555254 FLT1P17948 1338 aa20.7■□□□□ 0.9
PSEN1-212ENST00000555254 ORC4O43929 436 aa20.69■□□□□ 0.9
PSEN1-212ENST00000555254 SLC10A3P09131 477 aa20.69■□□□□ 0.9
PSEN1-212ENST00000555254 MAP2K2P36507 400 aa20.69■□□□□ 0.9
PSEN1-212ENST00000555254 MAP3K9P80192 1104 aa20.69■□□□□ 0.9
PSEN1-212ENST00000555254 KIF23Q02241 960 aaPredicted RBP20.69■□□□□ 0.9
PSEN1-212ENST00000555254 MAP3K11Q16584 847 aa20.69■□□□□ 0.9
PSEN1-212ENST00000555254 SH3BP5LQ7L8J4 393 aa20.69■□□□□ 0.9
PSEN1-212ENST00000555254 UBAC1Q9BSL1 405 aa20.69■□□□□ 0.9
PSEN1-212ENST00000555254 MKNK2Q9HBH9 465 aa20.69■□□□□ 0.9
PSEN1-212ENST00000555254 NEDD4P46934 1319 aa20.69■□□□□ 0.9
PSEN1-212ENST00000555254 DDTLA6NHG4 134 aaPredicted RBP20.68■□□□□ 0.9
PSEN1-212ENST00000555254 IFIT3O14879 490 aaKnown RBP20.68■□□□□ 0.9
PSEN1-212ENST00000555254 RANBP6O60518 1105 aaKnown RBP20.68■□□□□ 0.9
PSEN1-212ENST00000555254 HLA-DOAP06340 250 aa20.68■□□□□ 0.9
PSEN1-212ENST00000555254 TMEM67Q5HYA8 995 aa20.68■□□□□ 0.9
PSEN1-212ENST00000555254 ANKRD13AQ8IZ07 590 aa20.68■□□□□ 0.9
PSEN1-212ENST00000555254 TMTC2Q8N394 836 aa20.68■□□□□ 0.9
PSEN1-212ENST00000555254 ZNF341Q9BYN7 854 aa20.68■□□□□ 0.9
PSEN1-212ENST00000555254 ELP3Q9H9T3 547 aa20.68■□□□□ 0.9
PSEN1-212ENST00000555254 INCENPQ9NQS7 918 aa20.68■□□□□ 0.9
PSEN1-212ENST00000555254 ZSWIM5Q9P217 1185 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms