RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 MAST2Q6P0Q8 1798 aa18.94■□□□□ 0.62
NEDD1-207ENST00000555114 SURF6O75683 361 aaKnown RBP18.94■□□□□ 0.62
NEDD1-207ENST00000555114 POLA2Q14181 598 aa18.94■□□□□ 0.62
NEDD1-207ENST00000555114 TMEM57Q8N5G2 664 aa18.94■□□□□ 0.62
NEDD1-207ENST00000555114 NBPF3Q9H094 633 aa18.94■□□□□ 0.62
NEDD1-207ENST00000555114 GJD2Q9UKL4 321 aa18.94■□□□□ 0.62
NEDD1-207ENST00000555114 CYP2E1P05181 493 aaPredicted RBP18.93■□□□□ 0.62
NEDD1-207ENST00000555114 MAPK4P31152 587 aa18.93■□□□□ 0.62
NEDD1-207ENST00000555114 HERVK_113P62684 666 aa18.93■□□□□ 0.62
NEDD1-207ENST00000555114 METTL16Q86W50 562 aaKnown RBP18.93■□□□□ 0.62
NEDD1-207ENST00000555114 FTSJ3Q8IY81 847 aaKnown RBP18.93■□□□□ 0.62
NEDD1-207ENST00000555114 SSH3Q8TE77 659 aa18.93■□□□□ 0.62
NEDD1-207ENST00000555114 ZBTB21Q9ULJ3 1066 aa18.93■□□□□ 0.62
NEDD1-207ENST00000555114 DOCK3Q8IZD9 2030 aa18.92■□□□□ 0.62
NEDD1-207ENST00000555114 GDF11O95390 407 aa18.92■□□□□ 0.62
NEDD1-207ENST00000555114 CYP2B6P20813 491 aa18.92■□□□□ 0.62
NEDD1-207ENST00000555114 ATP8B2P98198 1209 aa18.92■□□□□ 0.62
NEDD1-207ENST00000555114 DIS3LQ8TF46 1054 aaKnown RBP18.92■□□□□ 0.62
NEDD1-207ENST00000555114 P2RX7Q99572 595 aaKnown RBP18.92■□□□□ 0.62
NEDD1-207ENST00000555114 CWC22Q9HCG8 908 aaKnown RBP18.92■□□□□ 0.62
NEDD1-207ENST00000555114 PALD1Q9ULE6 856 aa18.92■□□□□ 0.62
NEDD1-207ENST00000555114 TNNQ9UQP3 1299 aa18.92■□□□□ 0.62
NEDD1-207ENST00000555114 XRCC5P13010 732 aaKnown RBP18.91■□□□□ 0.62
NEDD1-207ENST00000555114 ZAP70P43403 619 aa18.91■□□□□ 0.62
NEDD1-207ENST00000555114 USP17L2Q6R6M4 530 aa18.91■□□□□ 0.62
NEDD1-207ENST00000555114 C7orf61Q8IZ16 206 aa18.91■□□□□ 0.62
NEDD1-207ENST00000555114 TRIB2Q92519 343 aa18.91■□□□□ 0.62
NEDD1-207ENST00000555114 C11orf49Q9H6J7 331 aa18.91■□□□□ 0.62
NEDD1-207ENST00000555114 DNAJC18Q9H819 358 aa18.91■□□□□ 0.62
NEDD1-207ENST00000555114 STAP2Q9UGK3 403 aa18.91■□□□□ 0.62
NEDD1-207ENST00000555114 PRKAR2AP13861 404 aaKnown RBP18.9■□□□□ 0.62
NEDD1-207ENST00000555114 ZKSCAN1P17029 563 aaPredicted RBP18.9■□□□□ 0.62
NEDD1-207ENST00000555114 CYP7A1P22680 504 aa18.9■□□□□ 0.62
NEDD1-207ENST00000555114 USP5P45974 858 aa18.9■□□□□ 0.62
NEDD1-207ENST00000555114 TMED8Q6PL24 325 aaPredicted RBP18.9■□□□□ 0.62
NEDD1-207ENST00000555114 ADGRA1Q86SQ6 560 aa18.9■□□□□ 0.62
NEDD1-207ENST00000555114 SAP30BPQ9UHR5 308 aaKnown RBP18.9■□□□□ 0.62
NEDD1-207ENST00000555114 IDH1O75874 414 aaKnown RBP18.89■□□□□ 0.61
NEDD1-207ENST00000555114 RGS2P41220 211 aa18.89■□□□□ 0.61
NEDD1-207ENST00000555114 ERVK-9P63128 1117 aa18.89■□□□□ 0.61
NEDD1-207ENST00000555114 ERVK-24P63145 666 aa18.89■□□□□ 0.61
NEDD1-207ENST00000555114 TRIM32Q13049 653 aa18.89■□□□□ 0.61
NEDD1-207ENST00000555114 FEZ1Q99689 392 aa18.89■□□□□ 0.61
NEDD1-207ENST00000555114 PAGR1Q9BTK6 254 aa18.89■□□□□ 0.61
NEDD1-207ENST00000555114 PIH1D3Q9NQM4 214 aaKnown RBP18.89■□□□□ 0.61
NEDD1-207ENST00000555114 OGDHLQ9ULD0 1010 aa18.89■□□□□ 0.61
NEDD1-207ENST00000555114 GLRX3O76003 335 aaKnown RBP18.88■□□□□ 0.61
NEDD1-207ENST00000555114 BMP8BP34820 402 aa18.88■□□□□ 0.61
NEDD1-207ENST00000555114 USP14P54578 494 aa18.88■□□□□ 0.61
NEDD1-207ENST00000555114 CCNA1P78396 465 aa18.88■□□□□ 0.61
NEDD1-207ENST00000555114 MAP3K21Q5TCX8 1036 aa18.88■□□□□ 0.61
NEDD1-207ENST00000555114 ITPRIPQ8IWB1 547 aa18.88■□□□□ 0.61
NEDD1-207ENST00000555114 TXNRD2Q9NNW7 524 aa18.88■□□□□ 0.61
NEDD1-207ENST00000555114 DBNLQ9UJU6 430 aaKnown RBP18.88■□□□□ 0.61
NEDD1-207ENST00000555114 NOP58Q9Y2X3 529 aaKnown RBP18.88■□□□□ 0.61
NEDD1-207ENST00000555114 SIPA1L1O43166 1804 aa18.87■□□□□ 0.61
NEDD1-207ENST00000555114 GH2P01242 217 aa18.87■□□□□ 0.61
NEDD1-207ENST00000555114 DYNLL1P63167 89 aaKnown RBP18.87■□□□□ 0.61
NEDD1-207ENST00000555114 JAG1P78504 1218 aa18.87■□□□□ 0.61
NEDD1-207ENST00000555114 MAP3K12Q12852 859 aa18.87■□□□□ 0.61
NEDD1-207ENST00000555114 GPR142Q7Z601 462 aa18.87■□□□□ 0.61
NEDD1-207ENST00000555114 PLEKHH3Q7Z736 793 aa18.87■□□□□ 0.61
NEDD1-207ENST00000555114 TTC6Q86TZ1 520 aa18.87■□□□□ 0.61
NEDD1-207ENST00000555114 C1orf115Q9H7X2 142 aa18.87■□□□□ 0.61
NEDD1-207ENST00000555114 RBPJLQ9UBG7 517 aa18.87■□□□□ 0.61
NEDD1-207ENST00000555114 SERPINB13Q9UIV8 391 aa18.87■□□□□ 0.61
NEDD1-207ENST00000555114 FOCADQ5VW36 1801 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 USP17L15C9J2P7 530 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 USP17L13C9JLJ4 530 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 USP17L11C9JVI0 530 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 USP17L18D6R9N7 530 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 USP17L22D6RA61 530 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 USP17L17D6RBQ6 530 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 USP17L19D6RCP7 530 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 USP17L20D6RJB6 530 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 USP17L24Q0WX57 530 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 ERC1Q8IUD2 1116 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 MAGEB6Q8N7X4 407 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 MIGA1Q8NAN2 632 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 C12orf42Q96LP6 360 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 APBA2Q99767 749 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 GDF15Q99988 308 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 CCDC8Q9H0W5 538 aaPredicted RBP18.86■□□□□ 0.61
NEDD1-207ENST00000555114 EHD4Q9H223 541 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 CABP5Q9NP86 173 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 EMILIN3Q9NT22 766 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 ZMYND8Q9ULU4 1186 aaPredicted RBP18.86■□□□□ 0.61
NEDD1-207ENST00000555114 RABGAP1Q9Y3P9 1069 aa18.86■□□□□ 0.61
NEDD1-207ENST00000555114 RAB3GAP1Q15042 981 aa18.85■□□□□ 0.61
NEDD1-207ENST00000555114 TATDN1Q6P1N9 297 aa18.85■□□□□ 0.61
NEDD1-207ENST00000555114 CACNB2Q08289 660 aaPredicted RBP18.84■□□□□ 0.61
NEDD1-207ENST00000555114 ZYXQ15942 572 aaKnown RBP18.84■□□□□ 0.61
NEDD1-207ENST00000555114 ABCB5Q2M3G0 1257 aa18.84■□□□□ 0.61
NEDD1-207ENST00000555114 SHROOM1Q2M3G4 852 aaPredicted RBP18.84■□□□□ 0.61
NEDD1-207ENST00000555114 Q3C1V9 767 aa18.84■□□□□ 0.61
NEDD1-207ENST00000555114 CERKLQ49MI3 558 aaPredicted RBP18.84■□□□□ 0.61
NEDD1-207ENST00000555114 MORN1Q5T089 497 aa18.84■□□□□ 0.61
NEDD1-207ENST00000555114 EAF2Q96CJ1 260 aaPredicted RBP18.84■□□□□ 0.61
NEDD1-207ENST00000555114 PORCNQ9H237 461 aa18.84■□□□□ 0.61
NEDD1-207ENST00000555114 TLR7Q9NYK1 1049 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms