RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 GINM1Q9NU53 330 aa19.17■□□□□ 0.66
ARHGEF40-205ENST00000555052 MORF4L1Q9UBU8 362 aa19.17■□□□□ 0.66
ARHGEF40-205ENST00000555052 MYH1P12882 1939 aa19.16■□□□□ 0.66
ARHGEF40-205ENST00000555052 FARP2O94887 1054 aaPredicted RBP19.16■□□□□ 0.66
ARHGEF40-205ENST00000555052 CYP7A1P22680 504 aa19.16■□□□□ 0.66
ARHGEF40-205ENST00000555052 HOXA7P31268 230 aaPredicted RBP19.16■□□□□ 0.66
ARHGEF40-205ENST00000555052 SAP30BPQ9UHR5 308 aaKnown RBP19.16■□□□□ 0.66
ARHGEF40-205ENST00000555052 ZBTB21Q9ULJ3 1066 aa19.16■□□□□ 0.66
ARHGEF40-205ENST00000555052 ZBED9Q6R2W3 1325 aa19.16■□□□□ 0.66
ARHGEF40-205ENST00000555052 PLXNB2O15031 1838 aa19.16■□□□□ 0.66
ARHGEF40-205ENST00000555052 LAMA2P24043 3122 aaKnown RBP19.15■□□□□ 0.66
ARHGEF40-205ENST00000555052 IDH1O75874 414 aaKnown RBP19.15■□□□□ 0.66
ARHGEF40-205ENST00000555052 GDF11O95390 407 aa19.15■□□□□ 0.66
ARHGEF40-205ENST00000555052 CRACR2BQ8N4Y2 399 aaPredicted RBP19.15■□□□□ 0.66
ARHGEF40-205ENST00000555052 GJD2Q9UKL4 321 aa19.15■□□□□ 0.66
ARHGEF40-205ENST00000555052 NDUFB9Q9Y6M9 179 aa19.15■□□□□ 0.66
ARHGEF40-205ENST00000555052 HLA-DOAP06340 250 aa19.14■□□□□ 0.65
ARHGEF40-205ENST00000555052 CAPN2P17655 700 aa19.14■□□□□ 0.65
ARHGEF40-205ENST00000555052 TMED8Q6PL24 325 aaPredicted RBP19.14■□□□□ 0.65
ARHGEF40-205ENST00000555052 CERS3Q8IU89 383 aa19.14■□□□□ 0.65
ARHGEF40-205ENST00000555052 MIGA1Q8NAN2 632 aa19.14■□□□□ 0.65
ARHGEF40-205ENST00000555052 PANK1Q8TE04 598 aa19.14■□□□□ 0.65
ARHGEF40-205ENST00000555052 DPF3Q92784 378 aa19.14■□□□□ 0.65
ARHGEF40-205ENST00000555052 DEFB118Q96PH6 123 aa19.14■□□□□ 0.65
ARHGEF40-205ENST00000555052 HTATIP2Q9BUP3 242 aa19.14■□□□□ 0.65
ARHGEF40-205ENST00000555052 CRISPLD2Q9H0B8 497 aa19.14■□□□□ 0.65
ARHGEF40-205ENST00000555052 ANTXR1Q9H6X2 564 aa19.14■□□□□ 0.65
ARHGEF40-205ENST00000555052 TMOD4Q9NZQ9 345 aa19.14■□□□□ 0.65
ARHGEF40-205ENST00000555052 EXOC6BQ9Y2D4 811 aa19.14■□□□□ 0.65
ARHGEF40-205ENST00000555052 C19orf81C9J6K1 198 aa19.13■□□□□ 0.65
ARHGEF40-205ENST00000555052 USP17L10C9JJH3 530 aa19.13■□□□□ 0.65
ARHGEF40-205ENST00000555052 IRX3P78415 501 aaPredicted RBP19.13■□□□□ 0.65
ARHGEF40-205ENST00000555052 ERC1Q8IUD2 1116 aa19.13■□□□□ 0.65
ARHGEF40-205ENST00000555052 MAGEB6Q8N7X4 407 aa19.13■□□□□ 0.65
ARHGEF40-205ENST00000555052 P2RX7Q99572 595 aaKnown RBP19.13■□□□□ 0.65
ARHGEF40-205ENST00000555052 TRIM34Q9BYJ4 488 aa19.13■□□□□ 0.65
ARHGEF40-205ENST00000555052 TAOK2Q9UL54 1235 aa19.13■□□□□ 0.65
ARHGEF40-205ENST00000555052 DDX60LQ5H9U9 1706 aaKnown RBP19.13■□□□□ 0.65
ARHGEF40-205ENST00000555052 HMGCRP04035 888 aa19.12■□□□□ 0.65
ARHGEF40-205ENST00000555052 HERVK_113P62684 666 aa19.12■□□□□ 0.65
ARHGEF40-205ENST00000555052 TATDN1Q6P1N9 297 aa19.12■□□□□ 0.65
ARHGEF40-205ENST00000555052 CHRDL2Q6WN34 429 aa19.12■□□□□ 0.65
ARHGEF40-205ENST00000555052 AACSQ86V21 672 aa19.12■□□□□ 0.65
ARHGEF40-205ENST00000555052 EHD4Q9H223 541 aa19.12■□□□□ 0.65
ARHGEF40-205ENST00000555052 TXNRD2Q9NNW7 524 aa19.12■□□□□ 0.65
ARHGEF40-205ENST00000555052 COL6A3P12111 3177 aa19.12■□□□□ 0.65
ARHGEF40-205ENST00000555052 PEX10O60683 326 aa19.11■□□□□ 0.65
ARHGEF40-205ENST00000555052 MAP3K12Q12852 859 aa19.11■□□□□ 0.65
ARHGEF40-205ENST00000555052 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.11■□□□□ 0.65
ARHGEF40-205ENST00000555052 PRO3102Q9H379 93 aa19.11■□□□□ 0.65
ARHGEF40-205ENST00000555052 EMILIN3Q9NT22 766 aa19.11■□□□□ 0.65
ARHGEF40-205ENST00000555052 ALPK3Q96L96 1907 aa19.1■□□□□ 0.65
ARHGEF40-205ENST00000555052 GH2P01242 217 aa19.1■□□□□ 0.65
ARHGEF40-205ENST00000555052 TFRCP02786 760 aaKnown RBP19.1■□□□□ 0.65
ARHGEF40-205ENST00000555052 POTEEQ6S8J3 1075 aa19.1■□□□□ 0.65
ARHGEF40-205ENST00000555052 RIOK1Q9BRS2 568 aaKnown RBP19.1■□□□□ 0.65
ARHGEF40-205ENST00000555052 SERPINB13Q9UIV8 391 aa19.1■□□□□ 0.65
ARHGEF40-205ENST00000555052 USP5P45974 858 aa19.09■□□□□ 0.65
ARHGEF40-205ENST00000555052 TRIM32Q13049 653 aa19.09■□□□□ 0.65
ARHGEF40-205ENST00000555052 HSP90AB4PQ58FF6 505 aa19.09■□□□□ 0.65
ARHGEF40-205ENST00000555052 DIEXFQ68CQ4 756 aaKnown RBP19.09■□□□□ 0.65
ARHGEF40-205ENST00000555052 USP17L2Q6R6M4 530 aa19.09■□□□□ 0.65
ARHGEF40-205ENST00000555052 GPRC5AQ8NFJ5 357 aa19.09■□□□□ 0.65
ARHGEF40-205ENST00000555052 RHPN1Q8TCX5 695 aa19.09■□□□□ 0.65
ARHGEF40-205ENST00000555052 C12orf42Q96LP6 360 aa19.09■□□□□ 0.65
ARHGEF40-205ENST00000555052 IL1RAPL2Q9NP60 686 aa19.09■□□□□ 0.65
ARHGEF40-205ENST00000555052 RBM27Q9P2N5 1060 aaKnown RBP19.09■□□□□ 0.65
ARHGEF40-205ENST00000555052 RBPJLQ9UBG7 517 aa19.09■□□□□ 0.65
ARHGEF40-205ENST00000555052 NR2E3Q9Y5X4 410 aa19.09■□□□□ 0.65
ARHGEF40-205ENST00000555052 GTF3C2Q8WUA4 911 aaPredicted RBP19.08■□□□□ 0.64
ARHGEF40-205ENST00000555052 TRIB2Q92519 343 aa19.08■□□□□ 0.64
ARHGEF40-205ENST00000555052 NAV1Q8NEY1 1877 aa19.07■□□□□ 0.64
ARHGEF40-205ENST00000555052 RPTORQ8N122 1335 aa19.07■□□□□ 0.64
ARHGEF40-205ENST00000555052 ERVK-9P63128 1117 aa19.07■□□□□ 0.64
ARHGEF40-205ENST00000555052 ERVK-24P63145 666 aa19.07■□□□□ 0.64
ARHGEF40-205ENST00000555052 MAP3K21Q5TCX8 1036 aa19.07■□□□□ 0.64
ARHGEF40-205ENST00000555052 DIS3LQ8TF46 1054 aaKnown RBP19.07■□□□□ 0.64
ARHGEF40-205ENST00000555052 SOCS4Q8WXH5 440 aa19.07■□□□□ 0.64
ARHGEF40-205ENST00000555052 USP6NLQ92738 828 aa19.07■□□□□ 0.64
ARHGEF40-205ENST00000555052 PAWRQ96IZ0 340 aaKnown RBP19.07■□□□□ 0.64
ARHGEF40-205ENST00000555052 XRCC5P13010 732 aaKnown RBP19.06■□□□□ 0.64
ARHGEF40-205ENST00000555052 PDE6AP16499 860 aa19.06■□□□□ 0.64
ARHGEF40-205ENST00000555052 MAPK4P31152 587 aa19.06■□□□□ 0.64
ARHGEF40-205ENST00000555052 SHMT1P34896 483 aa19.06■□□□□ 0.64
ARHGEF40-205ENST00000555052 Q3C1V9 767 aa19.06■□□□□ 0.64
ARHGEF40-205ENST00000555052 TTC6Q86TZ1 520 aa19.06■□□□□ 0.64
ARHGEF40-205ENST00000555052 SIRT2Q8IXJ6 389 aa19.06■□□□□ 0.64
ARHGEF40-205ENST00000555052 ANKLE1Q8NAG6 615 aa19.06■□□□□ 0.64
ARHGEF40-205ENST00000555052 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.06■□□□□ 0.64
ARHGEF40-205ENST00000555052 PORCNQ9H237 461 aa19.06■□□□□ 0.64
ARHGEF40-205ENST00000555052 HMX1Q9NP08 348 aaPredicted RBP19.06■□□□□ 0.64
ARHGEF40-205ENST00000555052 CUL9Q8IWT3 2517 aa19.05■□□□□ 0.64
ARHGEF40-205ENST00000555052 MS4A1P11836 297 aa19.05■□□□□ 0.64
ARHGEF40-205ENST00000555052 CYP2B6P20813 491 aa19.05■□□□□ 0.64
ARHGEF40-205ENST00000555052 MNX1P50219 401 aaPredicted RBP19.05■□□□□ 0.64
ARHGEF40-205ENST00000555052 PLCD1P51178 756 aa19.05■□□□□ 0.64
ARHGEF40-205ENST00000555052 GABPAQ06546 454 aa19.05■□□□□ 0.64
ARHGEF40-205ENST00000555052 TTF1Q15361 905 aaPredicted RBP19.05■□□□□ 0.64
ARHGEF40-205ENST00000555052 CERKLQ49MI3 558 aaPredicted RBP19.05■□□□□ 0.64
ARHGEF40-205ENST00000555052 ACER1Q8TDN7 264 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms