RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 TSG101Q99816 390 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 RHOXF2Q9BQY4 288 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 CARD10Q9BWT7 1032 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 TNKSO95271 1327 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 SYNRGQ9UMZ2 1314 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 USP17L12C9JPN9 530 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 USP17L21D6R901 530 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 VAV2P52735 878 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 CTSWP56202 376 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 PAK1Q13153 545 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 ALX1Q15699 326 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 CYP26C1Q6V0L0 522 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 STAMQ92783 540 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 EXOC1Q9NV70 894 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 MCM9Q9NXL9 1143 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 MAP3K15Q6ZN16 1313 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 EBAG9O00559 213 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 PNMA6AP0CW24 399 aaPredicted RBP4.39□□□□□ -1.71
KTN1-217ENST00000554831 TRAPPC10P48553 1259 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 SLF2Q8IX21 1173 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 MB21D2Q8IYB1 491 aaPredicted RBP4.39□□□□□ -1.71
KTN1-217ENST00000554831 SPAG5Q96R06 1193 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 NUP58Q9BVL2 599 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 GREM2Q9H772 168 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 MMRN2Q9H8L6 949 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 VPS54Q9P1Q0 977 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 MYO1AQ9UBC5 1043 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 DENND2AQ9ULE3 1009 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 MORC2Q9Y6X9 1032 aaPredicted RBP4.39□□□□□ -1.71
KTN1-217ENST00000554831 WDR17Q8IZU2 1322 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 NBPF26B4DH59 902 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 DNM2P50570 870 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 ATP2B2Q01814 1243 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 IKQ13123 557 aaPredicted RBP4.39□□□□□ -1.71
KTN1-217ENST00000554831 PDIA6Q15084 440 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 NBPF14Q5TI25 921 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 E4F1Q66K89 784 aaPredicted RBP4.39□□□□□ -1.71
KTN1-217ENST00000554831 NBPF10Q6P3W6 841 aaKnown RBP4.39□□□□□ -1.71
KTN1-217ENST00000554831 SRGAP1Q7Z6B7 1085 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 NBPF15Q8N660 670 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 CSGALNACT2Q8N6G5 542 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 ARFGAP2Q8N6H7 521 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 RGS22Q8NE09 1264 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 DESI2Q9BSY9 194 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 TUBE1Q9UJT0 475 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 EPN1Q9Y6I3 576 aaPredicted RBP4.39□□□□□ -1.71
KTN1-217ENST00000554831 ABCC12Q96J65 1359 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 A6NNZ2 444 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 SH2B2O14492 632 aaPredicted RBP4.39□□□□□ -1.71
KTN1-217ENST00000554831 PPP1R12BO60237 982 aaPredicted RBP4.39□□□□□ -1.71
KTN1-217ENST00000554831 MCM7P33993 719 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 IL6STP40189 918 aaPredicted RBP4.39□□□□□ -1.71
KTN1-217ENST00000554831 CLCN6P51797 869 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 TUBB8Q3ZCM7 444 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 CCDC40Q4G0X9 1142 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 FRMPD1Q5SYB0 1578 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 NRKQ7Z2Y5 1582 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 ATG9AQ7Z3C6 839 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 NLRP10Q86W26 655 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 ARHGEF28Q8N1W1 1705 aaKnown RBP4.39□□□□□ -1.71
KTN1-217ENST00000554831 ISCA1Q9BUE6 129 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 MAPK8IP1Q9UQF2 711 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 SRPRBQ9Y5M8 271 aaKnown RBP4.39□□□□□ -1.71
KTN1-217ENST00000554831 PALLDQ8WX93 1383 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 ZPR1O75312 459 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 PTGDRQ13258 359 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 NR5A1Q13285 461 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 DDB1Q16531 1140 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 ZSCAN26Q16670 478 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 KMT5BQ4FZB7 885 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 KRT79Q5XKE5 535 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 TPTE2Q6XPS3 522 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 NYAP1Q6ZVC0 841 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 ZNF579Q8NAF0 562 aaKnown RBP4.39□□□□□ -1.71
KTN1-217ENST00000554831 SLF1Q9BQI6 1058 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 L2HGDHQ9H9P8 463 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 C6orf50Q9HD87 102 aa4.39□□□□□ -1.71
KTN1-217ENST00000554831 AP5Z1O43299 807 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 MMP1P03956 469 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 FDPSP14324 419 aaKnown RBP4.38□□□□□ -1.71
KTN1-217ENST00000554831 RCAN1P53805 252 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 CCZ1BP86790 482 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 CCZ1P86791 482 aaPredicted RBP4.38□□□□□ -1.71
KTN1-217ENST00000554831 ST3GAL1Q11201 340 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 HLTFQ14527 1009 aaKnown RBP eCLIP4.38□□□□□ -1.71
KTN1-217ENST00000554831 WHAMMP3Q1A5X7 153 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 CCDC96Q2M329 555 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 CCDC43Q96MW1 224 aaKnown RBP4.38□□□□□ -1.71
KTN1-217ENST00000554831 VPS18Q9P253 973 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 OPA1O60313 960 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 CTDSPL2Q05D32 466 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 LONRF2Q1L5Z9 754 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 CRACR2BQ8N4Y2 399 aaPredicted RBP4.38□□□□□ -1.71
KTN1-217ENST00000554831 CENPHQ9H3R5 247 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 GOLPH3LQ9H4A5 285 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 VAT1LQ9HCJ6 419 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 ASAP1Q9ULH1 1129 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 SAR1BQ9Y6B6 198 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 SHPRHQ149N8 1683 aa4.38□□□□□ -1.71
KTN1-217ENST00000554831 TMEM131LA2VDJ0 1609 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms