RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 MFSD2AQ8NA29 543 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 HEXIM2Q96MH2 286 aaKnown RBP5.13□□□□□ -1.59
SCFD1-213ENST00000554776 LRRC3Q9BY71 257 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 TJP2Q9UDY2 1190 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 CCDC39Q9UFE4 941 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 ADAMTS1Q9UHI8 967 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 PCDHGB7Q9Y5F8 929 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 PRR36Q9H6K5 1346 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 IGF2BP3O00425 579 aaKnown RBP eCLIP5.12□□□□□ -1.59
SCFD1-213ENST00000554776 WNT11O96014 354 aa5.12□□□□□ -1.59
SCFD1-213ENST00000554776 OXCT1P55809 520 aa5.12□□□□□ -1.59
SCFD1-213ENST00000554776 RACK1P63244 317 aaKnown RBP5.12□□□□□ -1.59
SCFD1-213ENST00000554776 PRAMEF13Q5VWM6 474 aa5.12□□□□□ -1.59
SCFD1-213ENST00000554776 SLC6A19Q695T7 634 aa5.12□□□□□ -1.59
SCFD1-213ENST00000554776 NFXL1Q6ZNB6 911 aa5.12□□□□□ -1.59
SCFD1-213ENST00000554776 REC114Q7Z4M0 266 aa5.12□□□□□ -1.59
SCFD1-213ENST00000554776 USP48Q86UV5 1035 aa5.12□□□□□ -1.59
SCFD1-213ENST00000554776 VSIG10LQ86VR7 867 aa5.12□□□□□ -1.59
SCFD1-213ENST00000554776 MCATQ8IVS2 390 aaKnown RBP5.12□□□□□ -1.59
SCFD1-213ENST00000554776 ACSF2Q96CM8 615 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-213ENST00000554776 TMEM87BQ96K49 555 aa5.12□□□□□ -1.59
SCFD1-213ENST00000554776 IGSF5Q9NSI5 407 aa5.12□□□□□ -1.59
SCFD1-213ENST00000554776 GTF2IRD1Q9UHL9 959 aa5.12□□□□□ -1.59
SCFD1-213ENST00000554776 DDX41Q9UJV9 622 aaKnown RBP5.12□□□□□ -1.59
SCFD1-213ENST00000554776 POLR3KQ9Y2Y1 108 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-213ENST00000554776 SUPT16HQ9Y5B9 1047 aaKnown RBP5.12□□□□□ -1.59
SCFD1-213ENST00000554776 CORINQ9Y5Q5 1042 aa5.12□□□□□ -1.59
SCFD1-213ENST00000554776 ROBO2Q9HCK4 1378 aa5.12□□□□□ -1.59
SCFD1-213ENST00000554776 CEACAM5P06731 702 aa5.11□□□□□ -1.59
SCFD1-213ENST00000554776 TCF3P15923 654 aa5.11□□□□□ -1.59
SCFD1-213ENST00000554776 GP2P55259 537 aaKnown RBP5.11□□□□□ -1.59
SCFD1-213ENST00000554776 RAD51AP2Q09MP3 1159 aa5.11□□□□□ -1.59
SCFD1-213ENST00000554776 TMEM201Q5SNT2 666 aa5.11□□□□□ -1.59
SCFD1-213ENST00000554776 NT5DC4Q86YG4 428 aa5.11□□□□□ -1.59
SCFD1-213ENST00000554776 PLD6Q8N2A8 252 aaKnown RBP5.11□□□□□ -1.59
SCFD1-213ENST00000554776 FBXO27Q8NI29 283 aa5.11□□□□□ -1.59
SCFD1-213ENST00000554776 NETO1Q8TDF5 533 aa5.11□□□□□ -1.59
SCFD1-213ENST00000554776 ZNF296Q8WUU4 475 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-213ENST00000554776 MIPEPQ99797 713 aa5.11□□□□□ -1.59
SCFD1-213ENST00000554776 MAPK8IP1Q9UQF2 711 aa5.11□□□□□ -1.59
SCFD1-213ENST00000554776 PLCG1P19174 1290 aa5.1□□□□□ -1.59
SCFD1-213ENST00000554776 CRKP46108 304 aa5.1□□□□□ -1.59
SCFD1-213ENST00000554776 IFI16Q16666 785 aaKnown RBP5.1□□□□□ -1.59
SCFD1-213ENST00000554776 C9orf131Q5VYM1 1079 aa5.1□□□□□ -1.59
SCFD1-213ENST00000554776 LETMD1Q6P1Q0 360 aa5.1□□□□□ -1.59
SCFD1-213ENST00000554776 ARHGAP27Q6ZUM4 889 aa5.1□□□□□ -1.59
SCFD1-213ENST00000554776 C22orf34Q6ZV56 151 aa5.1□□□□□ -1.59
SCFD1-213ENST00000554776 MISP3Q96FF7 219 aa5.1□□□□□ -1.59
SCFD1-213ENST00000554776 DPH2Q9BQC3 489 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-213ENST00000554776 TNKS2Q9H2K2 1166 aa5.1□□□□□ -1.59
SCFD1-213ENST00000554776 PRDM5Q9NQX1 630 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-213ENST00000554776 ANGEL1Q9UNK9 670 aaKnown RBP5.1□□□□□ -1.59
SCFD1-213ENST00000554776 PLAGL2Q9UPG8 496 aa5.1□□□□□ -1.59
SCFD1-213ENST00000554776 CNTNAP4Q9C0A0 1308 aa5.09□□□□□ -1.59
SCFD1-213ENST00000554776 TLR3O15455 904 aaKnown RBP5.09□□□□□ -1.59
SCFD1-213ENST00000554776 GRIN3BO60391 1043 aa5.09□□□□□ -1.59
SCFD1-213ENST00000554776 HTR3BO95264 441 aa5.09□□□□□ -1.59
SCFD1-213ENST00000554776 CWF19L2Q2TBE0 894 aaKnown RBP5.09□□□□□ -1.59
SCFD1-213ENST00000554776 ZNF746Q6NUN9 644 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-213ENST00000554776 WFDC3Q8IUB2 231 aa5.09□□□□□ -1.59
SCFD1-213ENST00000554776 KIAA0825Q8IV33 1275 aa5.09□□□□□ -1.59
SCFD1-213ENST00000554776 STK11IPQ8N1F8 1099 aa5.09□□□□□ -1.59
SCFD1-213ENST00000554776 RIN3Q8TB24 985 aa5.09□□□□□ -1.59
SCFD1-213ENST00000554776 XAGE3Q8WTP9 111 aa5.09□□□□□ -1.59
SCFD1-213ENST00000554776 BCL7CQ8WUZ0 217 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-213ENST00000554776 FBXL18Q96ME1 805 aa5.09□□□□□ -1.59
SCFD1-213ENST00000554776 SPON2Q9BUD6 331 aa5.09□□□□□ -1.59
SCFD1-213ENST00000554776 NT5C1AQ9BXI3 368 aa5.09□□□□□ -1.59
SCFD1-213ENST00000554776 UBP1Q9NZI7 540 aa5.09□□□□□ -1.59
SCFD1-213ENST00000554776 REV1Q9UBZ9 1251 aa5.09□□□□□ -1.59
SCFD1-213ENST00000554776 OAS3Q9Y6K5 1087 aaKnown RBP5.09□□□□□ -1.59
SCFD1-213ENST00000554776 TMEM265A0A087WTH1 108 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 ZNF865P0CJ78 1059 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-213ENST00000554776 ITIH2P19823 946 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 YARSP54577 528 aaKnown RBP5.08□□□□□ -1.6
SCFD1-213ENST00000554776 PRKCQQ04759 706 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 SFRP5Q5T4F7 317 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 SPACA3Q8IXA5 215 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 SLFN12Q8IYM2 578 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 ZNF654Q8IZM8 581 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 FAM13CQ8NE31 585 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 FLCNQ8NFG4 579 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 DNAJB8Q8NHS0 232 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 EAF1Q96JC9 268 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-213ENST00000554776 COX4I2Q96KJ9 171 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 BRMS1Q9HCU9 246 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 PAK6Q9NQU5 681 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-213ENST00000554776 VAV3Q9UKW4 847 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 TPX2Q9ULW0 747 aaKnown RBP5.08□□□□□ -1.6
SCFD1-213ENST00000554776 SLC5A6Q9Y289 635 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 SNX11Q9Y5W9 270 aa5.08□□□□□ -1.6
SCFD1-213ENST00000554776 GNAT3A8MTJ3 354 aa5.07□□□□□ -1.6
SCFD1-213ENST00000554776 UPK3BL1B0FP48 263 aa5.07□□□□□ -1.6
SCFD1-213ENST00000554776 UPK3BL2E5RIL1 263 aa5.07□□□□□ -1.6
SCFD1-213ENST00000554776 DNAJA2O60884 412 aa5.07□□□□□ -1.6
SCFD1-213ENST00000554776 ATE1O95260 518 aa5.07□□□□□ -1.6
SCFD1-213ENST00000554776 NKPD1Q17RQ9 610 aa5.07□□□□□ -1.6
SCFD1-213ENST00000554776 CDH24Q86UP0 819 aa5.07□□□□□ -1.6
SCFD1-213ENST00000554776 SLITRK4Q8IW52 837 aa5.07□□□□□ -1.6
SCFD1-213ENST00000554776 PPP1R13LQ8WUF5 828 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms