RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, human

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-215	ENST00000554567	DNAJC18	Q9H819	358 aa		32.5	■■■□□ 2.79
KTN1-215	ENST00000554567	RANBP2	P49792	3224 aa	Known RBP	32.5	■■■□□ 2.79
KTN1-215	ENST00000554567	NECAB2	Q7Z6G3	386 aa		32.49	■■■□□ 2.79
KTN1-215	ENST00000554567	SSH3	Q8TE77	659 aa		32.49	■■■□□ 2.79
KTN1-215	ENST00000554567	HMX1	Q9NP08	348 aa	Predicted RBP	32.48	■■■□□ 2.79
KTN1-215	ENST00000554567	PIH1D3	Q9NQM4	214 aa	Known RBP	32.48	■■■□□ 2.79
KTN1-215	ENST00000554567	MORF4L1	Q9UBU8	362 aa		32.48	■■■□□ 2.79
KTN1-215	ENST00000554567	SIPA1L1	O43166	1804 aa		32.48	■■■□□ 2.79
KTN1-215	ENST00000554567	CYP2B6	P20813	491 aa		32.47	■■■□□ 2.79
KTN1-215	ENST00000554567	DYNLL1	P63167	89 aa	Known RBP	32.47	■■■□□ 2.79
KTN1-215	ENST00000554567	C19orf81	C9J6K1	198 aa		32.46	■■■□□ 2.79
KTN1-215	ENST00000554567	USP17L10	C9JJH3	530 aa		32.46	■■■□□ 2.79
KTN1-215	ENST00000554567	HOXA7	P31268	230 aa	Predicted RBP	32.46	■■■□□ 2.79
KTN1-215	ENST00000554567	STAP2	Q9UGK3	403 aa		32.46	■■■□□ 2.79
KTN1-215	ENST00000554567	RPTOR	Q8N122	1335 aa		32.46	■■■□□ 2.79
KTN1-215	ENST00000554567	MAST2	Q6P0Q8	1798 aa		32.45	■■■□□ 2.79
KTN1-215	ENST00000554567	CYP7A1	P22680	504 aa		32.45	■■■□□ 2.79
KTN1-215	ENST00000554567	HERVK_113	P62684	666 aa		32.45	■■■□□ 2.79
KTN1-215	ENST00000554567	GPRC5A	Q8NFJ5	357 aa		32.45	■■■□□ 2.79
KTN1-215	ENST00000554567	CCDC8	Q9H0W5	538 aa	Predicted RBP	32.45	■■■□□ 2.79
KTN1-215	ENST00000554567	TXNRD2	Q9NNW7	524 aa		32.45	■■■□□ 2.79
KTN1-215	ENST00000554567	MYO5A	Q9Y4I1	1855 aa	Known RBP	32.45	■■■□□ 2.79
KTN1-215	ENST00000554567	HLA-DOA	P06340	250 aa		32.44	■■■□□ 2.78
KTN1-215	ENST00000554567	METTL16	Q86W50	562 aa	Known RBP	32.44	■■■□□ 2.78
KTN1-215	ENST00000554567	TRIB2	Q92519	343 aa		32.44	■■■□□ 2.78
KTN1-215	ENST00000554567	ZNF512B	Q96KM6	892 aa	Predicted RBP	32.44	■■■□□ 2.78
KTN1-215	ENST00000554567	TLR7	Q9NYK1	1049 aa	Known RBP	32.44	■■■□□ 2.78
KTN1-215	ENST00000554567	DBNL	Q9UJU6	430 aa	Known RBP	32.44	■■■□□ 2.78
KTN1-215	ENST00000554567	ZBTB21	Q9ULJ3	1066 aa		32.44	■■■□□ 2.78
KTN1-215	ENST00000554567	CDK5RAP2	Q96SN8	1893 aa		32.44	■■■□□ 2.78
KTN1-215	ENST00000554567	IDH1	O75874	414 aa	Known RBP	32.42	■■■□□ 2.78
KTN1-215	ENST00000554567	CCAR1	Q8IX12	1150 aa	Known RBP	32.42	■■■□□ 2.78
KTN1-215	ENST00000554567	FTSJ3	Q8IY81	847 aa	Known RBP	32.42	■■■□□ 2.78
KTN1-215	ENST00000554567	ANKLE1	Q8NAG6	615 aa		32.42	■■■□□ 2.78
KTN1-215	ENST00000554567	NUDT12	Q9BQG2	462 aa		32.42	■■■□□ 2.78
KTN1-215	ENST00000554567	ITPRIP	Q8IWB1	547 aa		32.41	■■■□□ 2.78
KTN1-215	ENST00000554567	C7orf61	Q8IZ16	206 aa		32.41	■■■□□ 2.78
KTN1-215	ENST00000554567	MIGA1	Q8NAN2	632 aa		32.41	■■■□□ 2.78
KTN1-215	ENST00000554567	GINM1	Q9NU53	330 aa		32.41	■■■□□ 2.78
KTN1-215	ENST00000554567	RBPJL	Q9UBG7	517 aa		32.41	■■■□□ 2.78
KTN1-215	ENST00000554567		Q3C1V9	767 aa		32.4	■■■□□ 2.78
KTN1-215	ENST00000554567	PAGR1	Q9BTK6	254 aa		32.4	■■■□□ 2.78
KTN1-215	ENST00000554567	NBPF3	Q9H094	633 aa		32.4	■■■□□ 2.78
KTN1-215	ENST00000554567	NOP58	Q9Y2X3	529 aa	Known RBP	32.4	■■■□□ 2.78
KTN1-215	ENST00000554567	PLXNB2	O15031	1838 aa		32.4	■■■□□ 2.78
KTN1-215	ENST00000554567	FOCAD	Q5VW36	1801 aa		32.4	■■■□□ 2.78
KTN1-215	ENST00000554567	GH2	P01242	217 aa		32.39	■■■□□ 2.78
KTN1-215	ENST00000554567	USP5	P45974	858 aa		32.39	■■■□□ 2.78
KTN1-215	ENST00000554567	EAF2	Q96CJ1	260 aa	Predicted RBP	32.39	■■■□□ 2.78
KTN1-215	ENST00000554567	EMILIN3	Q9NT22	766 aa		32.39	■■■□□ 2.78
KTN1-215	ENST00000554567	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	32.39	■■■□□ 2.78
KTN1-215	ENST00000554567	NDUFB9	Q9Y6M9	179 aa		32.39	■■■□□ 2.78
KTN1-215	ENST00000554567	ALPK3	Q96L96	1907 aa		32.38	■■■□□ 2.77
KTN1-215	ENST00000554567	PRKAR2A	P13861	404 aa	Known RBP	32.38	■■■□□ 2.77
KTN1-215	ENST00000554567	MAPK4	P31152	587 aa		32.38	■■■□□ 2.77
KTN1-215	ENST00000554567	PDE3A	Q14432	1141 aa		32.38	■■■□□ 2.77
KTN1-215	ENST00000554567	ZYX	Q15942	572 aa	Known RBP	32.38	■■■□□ 2.77
KTN1-215	ENST00000554567	USP17L2	Q6R6M4	530 aa		32.38	■■■□□ 2.77
KTN1-215	ENST00000554567	MAGEB6	Q8N7X4	407 aa		32.38	■■■□□ 2.77
KTN1-215	ENST00000554567	ERVK-9	P63128	1117 aa		32.37	■■■□□ 2.77
KTN1-215	ENST00000554567	ERVK-24	P63145	666 aa		32.37	■■■□□ 2.77
KTN1-215	ENST00000554567	SOCS4	Q8WXH5	440 aa		32.37	■■■□□ 2.77
KTN1-215	ENST00000554567	PORCN	Q9H237	461 aa		32.37	■■■□□ 2.77
KTN1-215	ENST00000554567	C11orf49	Q9H6J7	331 aa		32.37	■■■□□ 2.77
KTN1-215	ENST00000554567		A0A1W2PPC1	479 aa		32.36	■■■□□ 2.77
KTN1-215	ENST00000554567	IGSF3	O75054	1194 aa		32.36	■■■□□ 2.77
KTN1-215	ENST00000554567	FEZ1	Q99689	392 aa		32.36	■■■□□ 2.77
KTN1-215	ENST00000554567	SOX1	O00570	391 aa	Predicted RBP	32.35	■■■□□ 2.77
KTN1-215	ENST00000554567	RLBP1	P12271	317 aa		32.35	■■■□□ 2.77
KTN1-215	ENST00000554567	XRCC5	P13010	732 aa	Known RBP	32.35	■■■□□ 2.77
KTN1-215	ENST00000554567	MNX1	P50219	401 aa	Predicted RBP	32.35	■■■□□ 2.77
KTN1-215	ENST00000554567	CWC22	Q9HCG8	908 aa	Known RBP	32.35	■■■□□ 2.77
KTN1-215	ENST00000554567	OGDHL	Q9ULD0	1010 aa		32.35	■■■□□ 2.77
KTN1-215	ENST00000554567	ZKSCAN1	P17029	563 aa	Predicted RBP	32.34	■■■□□ 2.77
KTN1-215	ENST00000554567	MAP3K21	Q5TCX8	1036 aa		32.34	■■■□□ 2.77
KTN1-215	ENST00000554567	GPR142	Q7Z601	462 aa		32.34	■■■□□ 2.77
KTN1-215	ENST00000554567	ANTXR1	Q9H6X2	564 aa		32.34	■■■□□ 2.77
KTN1-215	ENST00000554567	SYN1	P17600	705 aa		32.33	■■■□□ 2.77
KTN1-215	ENST00000554567	RAB3GAP1	Q15042	981 aa		32.33	■■■□□ 2.77
KTN1-215	ENST00000554567	POTEE	Q6S8J3	1075 aa		32.33	■■■□□ 2.77
KTN1-215	ENST00000554567	PLEKHH3	Q7Z736	793 aa		32.33	■■■□□ 2.77
KTN1-215	ENST00000554567	GTF3C2	Q8WUA4	911 aa	Predicted RBP	32.33	■■■□□ 2.77
KTN1-215	ENST00000554567	LRCH3	Q96II8	777 aa		32.33	■■■□□ 2.77
KTN1-215	ENST00000554567	MYH1	P12882	1939 aa		32.33	■■■□□ 2.77
KTN1-215	ENST00000554567	RGS2	P41220	211 aa		32.32	■■■□□ 2.76
KTN1-215	ENST00000554567	CACNB2	Q08289	660 aa	Predicted RBP	32.32	■■■□□ 2.76
KTN1-215	ENST00000554567	CCL14	Q16627	93 aa		32.32	■■■□□ 2.76
KTN1-215	ENST00000554567	TRMT44	Q8IYL2	757 aa	Known RBP	32.32	■■■□□ 2.76
KTN1-215	ENST00000554567	SERPINB13	Q9UIV8	391 aa		32.32	■■■□□ 2.76
KTN1-215	ENST00000554567	DDX60L	Q5H9U9	1706 aa	Known RBP	32.31	■■■□□ 2.76
KTN1-215	ENST00000554567	MAP3K12	Q12852	859 aa		32.31	■■■□□ 2.76
KTN1-215	ENST00000554567	TATDN1	Q6P1N9	297 aa		32.31	■■■□□ 2.76
KTN1-215	ENST00000554567	CERS3	Q8IU89	383 aa		32.31	■■■□□ 2.76
KTN1-215	ENST00000554567	GDF15	Q99988	308 aa		32.31	■■■□□ 2.76
KTN1-215	ENST00000554567	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.3	■■■□□ 2.76
KTN1-215	ENST00000554567	CERKL	Q49MI3	558 aa	Predicted RBP	32.3	■■■□□ 2.76
KTN1-215	ENST00000554567	MORN1	Q5T089	497 aa		32.3	■■■□□ 2.76
KTN1-215	ENST00000554567	TTC6	Q86TZ1	520 aa		32.3	■■■□□ 2.76
KTN1-215	ENST00000554567	AACS	Q86V21	672 aa		32.3	■■■□□ 2.76
KTN1-215	ENST00000554567	USP6NL	Q92738	828 aa		32.3	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms