RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 METTL24Q5JXM2 366 aa21.09■□□□□ 0.97
NEK9-204ENST00000554258 IDI2Q9BXS1 227 aa21.09■□□□□ 0.97
NEK9-204ENST00000554258 PORCNQ9H237 461 aa21.09■□□□□ 0.97
NEK9-204ENST00000554258 CXXC1Q9P0U4 656 aaPredicted RBP21.09■□□□□ 0.97
NEK9-204ENST00000554258 CHD7Q9P2D1 2997 aa21.09■□□□□ 0.97
NEK9-204ENST00000554258 UTYO14607 1347 aa21.08■□□□□ 0.97
NEK9-204ENST00000554258 MAP2K5Q13163 448 aa21.08■□□□□ 0.97
NEK9-204ENST00000554258 SNX17Q15036 470 aa21.08■□□□□ 0.97
NEK9-204ENST00000554258 P2RX7Q99572 595 aaKnown RBP21.08■□□□□ 0.97
NEK9-204ENST00000554258 TBC1D2Q9BYX2 928 aa21.08■□□□□ 0.97
NEK9-204ENST00000554258 ITGB8P26012 769 aa21.07■□□□□ 0.96
NEK9-204ENST00000554258 PRDX5P30044 214 aa21.07■□□□□ 0.96
NEK9-204ENST00000554258 HERVK_113P62684 666 aa21.07■□□□□ 0.96
NEK9-204ENST00000554258 ADGRE1Q14246 886 aa21.07■□□□□ 0.96
NEK9-204ENST00000554258 FLRT1Q9NZU1 646 aa21.07■□□□□ 0.96
NEK9-204ENST00000554258 MYCNP04198 464 aaPredicted RBP21.06■□□□□ 0.96
NEK9-204ENST00000554258 MRE11P49959 708 aa21.06■□□□□ 0.96
NEK9-204ENST00000554258 ERVK-9P63128 1117 aa21.06■□□□□ 0.96
NEK9-204ENST00000554258 ERVK-24P63145 666 aa21.06■□□□□ 0.96
NEK9-204ENST00000554258 FPGSQ05932 587 aa21.06■□□□□ 0.96
NEK9-204ENST00000554258 AAK1Q2M2I8 961 aa21.06■□□□□ 0.96
NEK9-204ENST00000554258 SH3D19Q5HYK7 790 aa21.06■□□□□ 0.96
NEK9-204ENST00000554258 CCDC129Q6ZRS4 1044 aa21.06■□□□□ 0.96
NEK9-204ENST00000554258 TRMT2AQ8IZ69 625 aaKnown RBP21.06■□□□□ 0.96
NEK9-204ENST00000554258 EDC3Q96F86 508 aaKnown RBP21.06■□□□□ 0.96
NEK9-204ENST00000554258 TACC3Q9Y6A5 838 aa21.06■□□□□ 0.96
NEK9-204ENST00000554258 GRM8O00222 908 aa21.05■□□□□ 0.96
NEK9-204ENST00000554258 PDE8BO95263 885 aa21.05■□□□□ 0.96
NEK9-204ENST00000554258 LDHBP07195 334 aaKnown RBP21.05■□□□□ 0.96
NEK9-204ENST00000554258 TLE2Q04725 743 aa21.05■□□□□ 0.96
NEK9-204ENST00000554258 PAGR1Q9BTK6 254 aa21.05■□□□□ 0.96
NEK9-204ENST00000554258 OSBPL5Q9H0X9 879 aaPredicted RBP21.05■□□□□ 0.96
NEK9-204ENST00000554258 RBPJLQ9UBG7 517 aa21.05■□□□□ 0.96
NEK9-204ENST00000554258 FAM196BA6NMK8 535 aa21.04■□□□□ 0.96
NEK9-204ENST00000554258 IFIT1P09914 478 aaKnown RBP21.04■□□□□ 0.96
NEK9-204ENST00000554258 RAG1P15918 1043 aa21.04■□□□□ 0.96
NEK9-204ENST00000554258 ATP2B2Q01814 1243 aa21.04■□□□□ 0.96
NEK9-204ENST00000554258 SLFN5Q08AF3 891 aa21.04■□□□□ 0.96
NEK9-204ENST00000554258 PICALMQ13492 652 aa21.04■□□□□ 0.96
NEK9-204ENST00000554258 Q3C1V9 767 aa21.04■□□□□ 0.96
NEK9-204ENST00000554258 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.04■□□□□ 0.96
NEK9-204ENST00000554258 TMOD4Q9NZQ9 345 aa21.04■□□□□ 0.96
NEK9-204ENST00000554258 RFX7Q2KHR2 1363 aa21.04■□□□□ 0.96
NEK9-204ENST00000554258 KIF16BQ96L93 1317 aa21.04■□□□□ 0.96
NEK9-204ENST00000554258 USP17L5A8MUK1 530 aa21.03■□□□□ 0.96
NEK9-204ENST00000554258 GLRX3O76003 335 aaKnown RBP21.03■□□□□ 0.96
NEK9-204ENST00000554258 CLTBP09497 229 aa21.03■□□□□ 0.96
NEK9-204ENST00000554258 HOXA7P31268 230 aaPredicted RBP21.03■□□□□ 0.96
NEK9-204ENST00000554258 ADCYAP1R1P41586 468 aa21.03■□□□□ 0.96
NEK9-204ENST00000554258 KCNQ1P51787 676 aa21.03■□□□□ 0.96
NEK9-204ENST00000554258 TFF2Q03403 129 aa21.03■□□□□ 0.96
NEK9-204ENST00000554258 TWISTNBQ3B726 338 aaPredicted RBP21.03■□□□□ 0.96
NEK9-204ENST00000554258 LRRC24Q50LG9 513 aa21.03■□□□□ 0.96
NEK9-204ENST00000554258 VGLL2Q8N8G2 317 aa21.03■□□□□ 0.96
NEK9-204ENST00000554258 FERMT2Q96AC1 680 aa21.03■□□□□ 0.96
NEK9-204ENST00000554258 PBX4Q9BYU1 374 aa21.03■□□□□ 0.96
NEK9-204ENST00000554258 AS3MTQ9HBK9 375 aa21.03■□□□□ 0.96
NEK9-204ENST00000554258 FAM86C2PA6NEL3 165 aa21.02■□□□□ 0.96
NEK9-204ENST00000554258 E9PSI1 815 aa21.02■□□□□ 0.96
NEK9-204ENST00000554258 TBC1D12O60347 775 aa21.02■□□□□ 0.96
NEK9-204ENST00000554258 GPR37L1O60883 481 aa21.02■□□□□ 0.96
NEK9-204ENST00000554258 CYP2C19P33261 490 aa21.02■□□□□ 0.96
NEK9-204ENST00000554258 PBX2P40425 430 aa21.02■□□□□ 0.96
NEK9-204ENST00000554258 BEND3Q5T5X7 828 aa21.02■□□□□ 0.96
NEK9-204ENST00000554258 C1orf53Q5VUE5 145 aa21.02■□□□□ 0.96
NEK9-204ENST00000554258 TRPV1Q8NER1 839 aa21.02■□□□□ 0.96
NEK9-204ENST00000554258 MTMR2Q13614 643 aa21.01■□□□□ 0.95
NEK9-204ENST00000554258 ANO1Q5XXA6 986 aa21.01■□□□□ 0.95
NEK9-204ENST00000554258 TSR2Q969E8 191 aaKnown RBP21.01■□□□□ 0.95
NEK9-204ENST00000554258 CDCA7LQ96GN5 454 aa21.01■□□□□ 0.95
NEK9-204ENST00000554258 DDX4Q9NQI0 724 aaKnown RBP21.01■□□□□ 0.95
NEK9-204ENST00000554258 C9orf78Q9NZ63 289 aaPredicted RBP21.01■□□□□ 0.95
NEK9-204ENST00000554258 NDUFB9Q9Y6M9 179 aa21.01■□□□□ 0.95
NEK9-204ENST00000554258 F6X3S4 739 aa21■□□□□ 0.95
NEK9-204ENST00000554258 KIAA0355O15063 1070 aa21■□□□□ 0.95
NEK9-204ENST00000554258 PUM3Q15397 648 aaKnown RBP21■□□□□ 0.95
NEK9-204ENST00000554258 WDR78Q5VTH9 848 aa21■□□□□ 0.95
NEK9-204ENST00000554258 MICALL1Q8N3F8 863 aa21■□□□□ 0.95
NEK9-204ENST00000554258 GTF3C2Q8WUA4 911 aaPredicted RBP21■□□□□ 0.95
NEK9-204ENST00000554258 C11orf16Q9NQ32 467 aa21■□□□□ 0.95
NEK9-204ENST00000554258 GRXCR1A8MXD5 290 aa20.99■□□□□ 0.95
NEK9-204ENST00000554258 CAP2P40123 477 aa20.99■□□□□ 0.95
NEK9-204ENST00000554258 TRANK1O15050 2925 aa20.99■□□□□ 0.95
NEK9-204ENST00000554258 FANCIQ9NVI1 1328 aa20.99■□□□□ 0.95
NEK9-204ENST00000554258 SLC15A5A6NIM6 579 aa20.98■□□□□ 0.95
NEK9-204ENST00000554258 CYBAP13498 195 aa20.98■□□□□ 0.95
NEK9-204ENST00000554258 BACE1P56817 501 aa20.98■□□□□ 0.95
NEK9-204ENST00000554258 WDFY4Q6ZS81 3184 aa20.97■□□□□ 0.95
NEK9-204ENST00000554258 GBF1Q92538 1859 aa20.97■□□□□ 0.95
NEK9-204ENST00000554258 FGFR2P21802 821 aa20.97■□□□□ 0.95
NEK9-204ENST00000554258 CCNA1P78396 465 aa20.97■□□□□ 0.95
NEK9-204ENST00000554258 SKIV2LQ15477 1246 aaKnown RBP20.97■□□□□ 0.95
NEK9-204ENST00000554258 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.97■□□□□ 0.95
NEK9-204ENST00000554258 TMEM39AQ9NV64 488 aa20.97■□□□□ 0.95
NEK9-204ENST00000554258 GAKO14976 1311 aa20.97■□□□□ 0.95
NEK9-204ENST00000554258 PRRC2BQ5JSZ5 2229 aaKnown RBP20.96■□□□□ 0.95
NEK9-204ENST00000554258 PQBP1O60828 265 aaKnown RBP20.96■□□□□ 0.95
NEK9-204ENST00000554258 HOXC6P09630 235 aa20.96■□□□□ 0.95
NEK9-204ENST00000554258 SLC5A1P13866 664 aa20.96■□□□□ 0.95
NEK9-204ENST00000554258 PTPREP23469 700 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms