RNA–Protein interactions for RNA: ENST00000554124.2

STRN3-204, Transcript of striatin 3, humanhuman

TSL 4

Gene STRN3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-204ENST00000554124 PTPN11Q06124 597 aaPredicted RBP6.56□□□□□ -1.36
STRN3-204ENST00000554124 SLBPQ14493 270 aaKnown RBP eCLIP6.56□□□□□ -1.36
STRN3-204ENST00000554124 EAPPQ56P03 285 aaPredicted RBP6.56□□□□□ -1.36
STRN3-204ENST00000554124 CDKAL1Q5VV42 579 aa6.56□□□□□ -1.36
STRN3-204ENST00000554124 LETMD1Q6P1Q0 360 aa6.56□□□□□ -1.36
STRN3-204ENST00000554124 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.56□□□□□ -1.36
STRN3-204ENST00000554124 NPAS4Q8IUM7 802 aa6.56□□□□□ -1.36
STRN3-204ENST00000554124 CCDC120Q96HB5 630 aa6.56□□□□□ -1.36
STRN3-204ENST00000554124 FBRSQ9HAH7 460 aa6.56□□□□□ -1.36
STRN3-204ENST00000554124 PODXL2Q9NZ53 605 aa6.56□□□□□ -1.36
STRN3-204ENST00000554124 TACC3Q9Y6A5 838 aa6.56□□□□□ -1.36
STRN3-204ENST00000554124 AK5Q9Y6K8 562 aa6.56□□□□□ -1.36
STRN3-204ENST00000554124 LRRC10BA6NIK2 292 aa6.55□□□□□ -1.36
STRN3-204ENST00000554124 ZNF865P0CJ78 1059 aaPredicted RBP6.55□□□□□ -1.36
STRN3-204ENST00000554124 RLBP1P12271 317 aa6.55□□□□□ -1.36
STRN3-204ENST00000554124 MIR1-1HGQ9H1L0 117 aa6.55□□□□□ -1.36
STRN3-204ENST00000554124 H3BS24 57 aa6.54□□□□□ -1.36
STRN3-204ENST00000554124 CST3P01034 146 aaPredicted RBP6.54□□□□□ -1.36
STRN3-204ENST00000554124 GRK4P32298 578 aa6.54□□□□□ -1.36
STRN3-204ENST00000554124 KIR3DL1P43629 444 aa6.54□□□□□ -1.36
STRN3-204ENST00000554124 PDE4BQ07343 736 aa6.54□□□□□ -1.36
STRN3-204ENST00000554124 SEPT6Q14141 434 aa6.54□□□□□ -1.36
STRN3-204ENST00000554124 NKG7Q16617 165 aa6.54□□□□□ -1.36
STRN3-204ENST00000554124 PRAMEF13Q5VWM6 474 aa6.54□□□□□ -1.36
STRN3-204ENST00000554124 HSPA12BQ96MM6 686 aa6.54□□□□□ -1.36
STRN3-204ENST00000554124 CARS2Q9HA77 564 aaKnown RBP6.54□□□□□ -1.36
STRN3-204ENST00000554124 CTNND2Q9UQB3 1225 aa6.54□□□□□ -1.36
STRN3-204ENST00000554124 LIG3P49916 1009 aa6.53□□□□□ -1.36
STRN3-204ENST00000554124 MAP3K11Q16584 847 aa6.53□□□□□ -1.36
STRN3-204ENST00000554124 AGMOQ6ZNB7 445 aa6.53□□□□□ -1.36
STRN3-204ENST00000554124 THAP5Q7Z6K1 395 aa6.53□□□□□ -1.36
STRN3-204ENST00000554124 XAGE3Q8WTP9 111 aa6.53□□□□□ -1.36
STRN3-204ENST00000554124 FAM84AQ96KN4 292 aa6.53□□□□□ -1.36
STRN3-204ENST00000554124 DUSP9Q99956 384 aaKnown RBP6.53□□□□□ -1.36
STRN3-204ENST00000554124 ATP13A1Q9HD20 1204 aa6.53□□□□□ -1.36
STRN3-204ENST00000554124 CAPN6Q9Y6Q1 641 aa6.53□□□□□ -1.36
STRN3-204ENST00000554124 DBX1A6NMT0 343 aa6.52□□□□□ -1.37
STRN3-204ENST00000554124 PRR33A8MZF0 331 aa6.52□□□□□ -1.37
STRN3-204ENST00000554124 CBX7O95931 251 aa6.52□□□□□ -1.37
STRN3-204ENST00000554124 PGRP06401 933 aa6.52□□□□□ -1.37
STRN3-204ENST00000554124 ETV3P41162 512 aa6.52□□□□□ -1.37
STRN3-204ENST00000554124 AEBP1Q8IUX7 1158 aa6.52□□□□□ -1.37
STRN3-204ENST00000554124 SEMA3GQ9NS98 782 aa6.52□□□□□ -1.37
STRN3-204ENST00000554124 ANKRD33BA6NCL7 494 aa6.51□□□□□ -1.37
STRN3-204ENST00000554124 ZNF124Q15973 351 aa6.51□□□□□ -1.37
STRN3-204ENST00000554124 MLANAQ16655 118 aa6.51□□□□□ -1.37
STRN3-204ENST00000554124 TSNAXIP1Q2TAA8 658 aa6.51□□□□□ -1.37
STRN3-204ENST00000554124 SLC6A19Q695T7 634 aa6.51□□□□□ -1.37
STRN3-204ENST00000554124 MPZL3Q6UWV2 235 aa6.51□□□□□ -1.37
STRN3-204ENST00000554124 MRPL41Q8IXM3 137 aaKnown RBP6.51□□□□□ -1.37
STRN3-204ENST00000554124 BHLHE22Q8NFJ8 381 aaPredicted RBP6.51□□□□□ -1.37
STRN3-204ENST00000554124 KIRREL1Q96J84 757 aa6.51□□□□□ -1.37
STRN3-204ENST00000554124 PCDHB5Q9Y5E4 795 aa6.51□□□□□ -1.37
STRN3-204ENST00000554124 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
STRN3-204ENST00000554124 GFRA2O00451 464 aa6.5□□□□□ -1.37
STRN3-204ENST00000554124 GLI1P08151 1106 aa6.5□□□□□ -1.37
STRN3-204ENST00000554124 GDNFP39905 211 aa6.5□□□□□ -1.37
STRN3-204ENST00000554124 CDK8P49336 464 aa6.5□□□□□ -1.37
STRN3-204ENST00000554124 XPCQ01831 940 aaPredicted RBP6.5□□□□□ -1.37
STRN3-204ENST00000554124 PSMD2Q13200 908 aa6.5□□□□□ -1.37
STRN3-204ENST00000554124 TMEM67Q5HYA8 995 aa6.5□□□□□ -1.37
STRN3-204ENST00000554124 SND1Q7KZF4 910 aaKnown RBP eCLIP6.5□□□□□ -1.37
STRN3-204ENST00000554124 CDH24Q86UP0 819 aa6.5□□□□□ -1.37
STRN3-204ENST00000554124 UBE2FQ969M7 185 aa6.5□□□□□ -1.37
STRN3-204ENST00000554124 TMEM87BQ96K49 555 aa6.5□□□□□ -1.37
STRN3-204ENST00000554124 ALPK1Q96QP1 1244 aa6.5□□□□□ -1.37
STRN3-204ENST00000554124 PPP1R16BQ96T49 567 aa6.5□□□□□ -1.37
STRN3-204ENST00000554124 NOC4LQ9BVI4 516 aaKnown RBP6.5□□□□□ -1.37
STRN3-204ENST00000554124 CCDC9Q9Y3X0 531 aaKnown RBP6.5□□□□□ -1.37
STRN3-204ENST00000554124 ST14Q9Y5Y6 855 aa6.5□□□□□ -1.37
STRN3-204ENST00000554124 BPNT1O95861 308 aa6.49□□□□□ -1.37
STRN3-204ENST00000554124 RAC2P15153 192 aa6.49□□□□□ -1.37
STRN3-204ENST00000554124 ITGAEP38570 1179 aa6.49□□□□□ -1.37
STRN3-204ENST00000554124 RPL6Q02878 288 aaKnown RBP6.49□□□□□ -1.37
STRN3-204ENST00000554124 RIN3Q8TB24 985 aa6.49□□□□□ -1.37
STRN3-204ENST00000554124 PIWIL2Q8TC59 973 aaKnown RBP6.49□□□□□ -1.37
STRN3-204ENST00000554124 ZSWIM5Q9P217 1185 aa6.49□□□□□ -1.37
STRN3-204ENST00000554124 TJP2Q9UDY2 1190 aa6.49□□□□□ -1.37
STRN3-204ENST00000554124 ADAM30Q9UKF2 790 aa6.49□□□□□ -1.37
STRN3-204ENST00000554124 ZNF503-AS2A6NEH8 195 aa6.48□□□□□ -1.37
STRN3-204ENST00000554124 ST13P50502 369 aaKnown RBP6.48□□□□□ -1.37
STRN3-204ENST00000554124 TAF1CQ15572 869 aaPredicted RBP6.48□□□□□ -1.37
STRN3-204ENST00000554124 MEI1Q5TIA1 1274 aa6.48□□□□□ -1.37
STRN3-204ENST00000554124 TMPRSS7Q7RTY8 843 aa6.48□□□□□ -1.37
STRN3-204ENST00000554124 JARID2Q92833 1246 aaPredicted RBP6.48□□□□□ -1.37
STRN3-204ENST00000554124 DPH2Q9BQC3 489 aaPredicted RBP6.48□□□□□ -1.37
STRN3-204ENST00000554124 TRIT1Q9H3H1 467 aaKnown RBP6.48□□□□□ -1.37
STRN3-204ENST00000554124 PARP2Q9UGN5 583 aa6.48□□□□□ -1.37
STRN3-204ENST00000554124 CCDC180Q9P1Z9 1646 aa6.47□□□□□ -1.37
STRN3-204ENST00000554124 TFE3P19532 575 aaPredicted RBP6.47□□□□□ -1.37
STRN3-204ENST00000554124 TNK2Q07912 1038 aa6.47□□□□□ -1.37
STRN3-204ENST00000554124 MCATQ8IVS2 390 aaKnown RBP6.47□□□□□ -1.37
STRN3-204ENST00000554124 LIN37Q96GY3 246 aaPredicted RBP6.47□□□□□ -1.37
STRN3-204ENST00000554124 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.47□□□□□ -1.37
STRN3-204ENST00000554124 SLAMF8Q9P0V8 285 aa6.47□□□□□ -1.37
STRN3-204ENST00000554124 CNTNAP4Q9C0A0 1308 aa6.47□□□□□ -1.37
STRN3-204ENST00000554124 RAP1GAPP47736 663 aa6.46□□□□□ -1.38
STRN3-204ENST00000554124 YARSP54577 528 aaKnown RBP6.46□□□□□ -1.38
STRN3-204ENST00000554124 DAB2P98082 770 aa6.46□□□□□ -1.38
STRN3-204ENST00000554124 MESP2Q0VG99 397 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms