RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 HERVK_113P62684 666 aa17.5■□□□□ 0.39
NEDD1-205ENST00000553609 LRIT3Q3SXY7 679 aa17.5■□□□□ 0.39
NEDD1-205ENST00000553609 ARHGAP45Q92619 1136 aa17.5■□□□□ 0.39
NEDD1-205ENST00000553609 AS3MTQ9HBK9 375 aa17.5■□□□□ 0.39
NEDD1-205ENST00000553609 PI4KBQ9UBF8 816 aa17.5■□□□□ 0.39
NEDD1-205ENST00000553609 DNAH12Q6ZR08 3092 aa17.49■□□□□ 0.39
NEDD1-205ENST00000553609 PNMA6EA0A0J9YXQ4 647 aa17.49■□□□□ 0.39
NEDD1-205ENST00000553609 ASNSP08243 561 aa17.49■□□□□ 0.39
NEDD1-205ENST00000553609 CYP2B6P20813 491 aa17.49■□□□□ 0.39
NEDD1-205ENST00000553609 IRX3P78415 501 aaPredicted RBP17.49■□□□□ 0.39
NEDD1-205ENST00000553609 Q7L0L9 218 aa17.49■□□□□ 0.39
NEDD1-205ENST00000553609 ADGRA1Q86SQ6 560 aa17.49■□□□□ 0.39
NEDD1-205ENST00000553609 DHX36Q9H2U1 1008 aaKnown RBP17.49■□□□□ 0.39
NEDD1-205ENST00000553609 RBPJLQ9UBG7 517 aa17.49■□□□□ 0.39
NEDD1-205ENST00000553609 FLT1P17948 1338 aa17.48■□□□□ 0.39
NEDD1-205ENST00000553609 PPP4CP60510 307 aa17.48■□□□□ 0.39
NEDD1-205ENST00000553609 LHX8Q68G74 356 aa17.48■□□□□ 0.39
NEDD1-205ENST00000553609 SOCS4Q8WXH5 440 aa17.48■□□□□ 0.39
NEDD1-205ENST00000553609 PORCNQ9H237 461 aa17.48■□□□□ 0.39
NEDD1-205ENST00000553609 AATFQ9NY61 560 aaKnown RBP eCLIP17.48■□□□□ 0.39
NEDD1-205ENST00000553609 LRP2BPQ9P2M1 347 aa17.48■□□□□ 0.39
NEDD1-205ENST00000553609 CDK5RAP2Q96SN8 1893 aa17.48■□□□□ 0.39
NEDD1-205ENST00000553609 FOCADQ5VW36 1801 aa17.47■□□□□ 0.39
NEDD1-205ENST00000553609 UQCRFS1P1P0C7P4 283 aa17.47■□□□□ 0.39
NEDD1-205ENST00000553609 CACNB2Q08289 660 aaPredicted RBP17.47■□□□□ 0.39
NEDD1-205ENST00000553609 Q3C1V9 767 aa17.47■□□□□ 0.39
NEDD1-205ENST00000553609 MORN1Q5T089 497 aa17.47■□□□□ 0.39
NEDD1-205ENST00000553609 GORABQ5T7V8 394 aa17.47■□□□□ 0.39
NEDD1-205ENST00000553609 TDHQ8IZJ6 230 aa17.47■□□□□ 0.39
NEDD1-205ENST00000553609 DEFB123Q8N688 67 aa17.47■□□□□ 0.39
NEDD1-205ENST00000553609 GPRC5AQ8NFJ5 357 aa17.47■□□□□ 0.39
NEDD1-205ENST00000553609 NUDT12Q9BQG2 462 aa17.47■□□□□ 0.39
NEDD1-205ENST00000553609 ZBTB21Q9ULJ3 1066 aa17.47■□□□□ 0.39
NEDD1-205ENST00000553609 TNNQ9UQP3 1299 aa17.47■□□□□ 0.39
NEDD1-205ENST00000553609 C19orf81C9J6K1 198 aa17.46■□□□□ 0.39
NEDD1-205ENST00000553609 GDF11O95390 407 aa17.46■□□□□ 0.39
NEDD1-205ENST00000553609 ERVK-9P63128 1117 aa17.46■□□□□ 0.39
NEDD1-205ENST00000553609 ERVK-24P63145 666 aa17.46■□□□□ 0.39
NEDD1-205ENST00000553609 CCL14Q16627 93 aa17.46■□□□□ 0.39
NEDD1-205ENST00000553609 NAA16Q6N069 864 aaPredicted RBP17.46■□□□□ 0.39
NEDD1-205ENST00000553609 MAPKAPK5Q8IW41 473 aa17.46■□□□□ 0.39
NEDD1-205ENST00000553609 TGFBRAP1Q8WUH2 860 aa17.46■□□□□ 0.39
NEDD1-205ENST00000553609 SNRKQ9NRH2 765 aa17.46■□□□□ 0.39
NEDD1-205ENST00000553609 MTMR10Q9NXD2 777 aa17.46■□□□□ 0.39
NEDD1-205ENST00000553609 TMOD4Q9NZQ9 345 aa17.46■□□□□ 0.39
NEDD1-205ENST00000553609 USP17L10C9JJH3 530 aa17.45■□□□□ 0.38
NEDD1-205ENST00000553609 CYP2E1P05181 493 aaPredicted RBP17.45■□□□□ 0.38
NEDD1-205ENST00000553609 TRIM27P14373 513 aa17.45■□□□□ 0.38
NEDD1-205ENST00000553609 ZKSCAN1P17029 563 aaPredicted RBP17.45■□□□□ 0.38
NEDD1-205ENST00000553609 CCND3P30281 292 aaPredicted RBP17.45■□□□□ 0.38
NEDD1-205ENST00000553609 MAPK4P31152 587 aa17.45■□□□□ 0.38
NEDD1-205ENST00000553609 GPR142Q7Z601 462 aa17.45■□□□□ 0.38
NEDD1-205ENST00000553609 FOXP4Q8IVH2 680 aaPredicted RBP17.45■□□□□ 0.38
NEDD1-205ENST00000553609 EMILIN3Q9NT22 766 aa17.45■□□□□ 0.38
NEDD1-205ENST00000553609 GINM1Q9NU53 330 aa17.45■□□□□ 0.38
NEDD1-205ENST00000553609 PALD1Q9ULE6 856 aa17.45■□□□□ 0.38
NEDD1-205ENST00000553609 STXBP5LQ9Y2K9 1186 aa17.45■□□□□ 0.38
NEDD1-205ENST00000553609 CNMDO75829 334 aa17.44■□□□□ 0.38
NEDD1-205ENST00000553609 BAG3O95817 575 aa17.44■□□□□ 0.38
NEDD1-205ENST00000553609 GNAI2P04899 355 aa17.44■□□□□ 0.38
NEDD1-205ENST00000553609 LRRC26Q2I0M4 334 aa17.44■□□□□ 0.38
NEDD1-205ENST00000553609 TRMT44Q8IYL2 757 aaKnown RBP17.44■□□□□ 0.38
NEDD1-205ENST00000553609 DBNDD2Q9BQY9 259 aa17.44■□□□□ 0.38
NEDD1-205ENST00000553609 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
NEDD1-205ENST00000553609 PLCG2P16885 1265 aa17.43■□□□□ 0.38
NEDD1-205ENST00000553609 G3BP1Q13283 466 aaKnown RBP eCLIP17.43■□□□□ 0.38
NEDD1-205ENST00000553609 PDE3AQ14432 1141 aa17.43■□□□□ 0.38
NEDD1-205ENST00000553609 PLEKHH3Q7Z736 793 aa17.43■□□□□ 0.38
NEDD1-205ENST00000553609 APBA2Q99767 749 aa17.43■□□□□ 0.38
NEDD1-205ENST00000553609 NOL10Q9BSC4 688 aaKnown RBP17.43■□□□□ 0.38
NEDD1-205ENST00000553609 UBE2OQ9C0C9 1292 aaKnown RBP17.43■□□□□ 0.38
NEDD1-205ENST00000553609 GPR108Q9NPR9 543 aa17.43■□□□□ 0.38
NEDD1-205ENST00000553609 VCANP13611 3396 aa17.43■□□□□ 0.38
NEDD1-205ENST00000553609 MYO5AQ9Y4I1 1855 aaKnown RBP17.42■□□□□ 0.38
NEDD1-205ENST00000553609 RGS2P41220 211 aa17.42■□□□□ 0.38
NEDD1-205ENST00000553609 POLA2Q14181 598 aa17.42■□□□□ 0.38
NEDD1-205ENST00000553609 TNNI3KQ59H18 835 aa17.42■□□□□ 0.38
NEDD1-205ENST00000553609 CRACR2BQ8N4Y2 399 aaPredicted RBP17.42■□□□□ 0.38
NEDD1-205ENST00000553609 GTF3C2Q8WUA4 911 aaPredicted RBP17.42■□□□□ 0.38
NEDD1-205ENST00000553609 ZNF512BQ96KM6 892 aaPredicted RBP17.42■□□□□ 0.38
NEDD1-205ENST00000553609 C12orf42Q96LP6 360 aa17.42■□□□□ 0.38
NEDD1-205ENST00000553609 PAGR1Q9BTK6 254 aa17.42■□□□□ 0.38
NEDD1-205ENST00000553609 PIH1D3Q9NQM4 214 aaKnown RBP17.42■□□□□ 0.38
NEDD1-205ENST00000553609 FPGT-TNNI3KV9GXZ4 949 aa17.42■□□□□ 0.38
NEDD1-205ENST00000553609 FRMPD3Q5JV73 1810 aa17.42■□□□□ 0.38
NEDD1-205ENST00000553609 DYNLL1P63167 89 aaKnown RBP17.41■□□□□ 0.38
NEDD1-205ENST00000553609 USP17L2Q6R6M4 530 aa17.41■□□□□ 0.38
NEDD1-205ENST00000553609 ATF7IPQ6VMQ6 1270 aa17.41■□□□□ 0.38
NEDD1-205ENST00000553609 FLRT1Q9NZU1 646 aa17.41■□□□□ 0.38
NEDD1-205ENST00000553609 SAP30BPQ9UHR5 308 aaKnown RBP17.41■□□□□ 0.38
NEDD1-205ENST00000553609 EYSQ5T1H1 3165 aa17.4■□□□□ 0.38
NEDD1-205ENST00000553609 IGSF3O75054 1194 aa17.4■□□□□ 0.38
NEDD1-205ENST00000553609 GH2P01242 217 aa17.4■□□□□ 0.38
NEDD1-205ENST00000553609 IGHA2P01877 340 aa17.4■□□□□ 0.38
NEDD1-205ENST00000553609 ZAP70P43403 619 aa17.4■□□□□ 0.38
NEDD1-205ENST00000553609 TTC39AQ5SRH9 613 aa17.4■□□□□ 0.38
NEDD1-205ENST00000553609 TATDN1Q6P1N9 297 aa17.4■□□□□ 0.38
NEDD1-205ENST00000553609 RABGAP1Q9Y3P9 1069 aa17.4■□□□□ 0.38
NEDD1-205ENST00000553609 SPTBN5Q9NRC6 3674 aaKnown RBP17.39■□□□□ 0.37
NEDD1-205ENST00000553609 MAP2K5Q13163 448 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms