RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 PODNQ7Z5L7 613 aa10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 MAPKAPK5Q8IW41 473 aa10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 TEX11Q8IYF3 940 aa10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 TRIM22Q8IYM9 498 aa10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 CERS5Q8N5B7 392 aa10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 ZNF622Q969S3 477 aaKnown RBP eCLIP10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 DYNLL2Q96FJ2 89 aa10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 PDLIM2Q96JY6 352 aa10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 EYA3Q99504 573 aa10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 NUP62CLQ9H1M0 184 aa10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 SPTLC2O15270 562 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 NR1I2O75469 434 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 MMP1P03956 469 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 NOVP48745 357 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 CDK8P49336 464 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 TRIM29Q14134 588 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 STK38Q15208 465 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 PTPAQ15257 358 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 MAP3K11Q16584 847 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 DOK7Q18PE1 504 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 AXDND1Q5T1B0 1012 aaPredicted RBP10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 HHIPL2Q6UWX4 724 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 TMTC3Q6ZXV5 915 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 ZNF444Q8N0Y2 327 aaPredicted RBP10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 CMTR1Q8N1G2 835 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 BICD2Q8TD16 824 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 KCNG4Q8TDN1 519 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 CNKSR1Q969H4 720 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 TMX4Q9H1E5 349 aaPredicted RBP10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 FOXP1Q9H334 677 aaPredicted RBP10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 DAGLAQ9Y4D2 1042 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 V9GY48 417 aaPredicted RBP10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 ROBO3Q96MS0 1386 aa10.87□□□□□ -0.67
MTHFD1-203ENST00000553391 FAM237AA0A1B0GTK4 181 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 TSPY2A6NKD2 308 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 BTBD18B2RXH4 712 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 CTAGE5O15320 804 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 NMT2O60551 498 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 PPP6R2O75170 966 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 RASA1P20936 1047 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 CMA1P23946 247 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 CC2D2BQ6DHV5 1058 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 C16orf86Q6ZW13 317 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 AMOTL1Q8IY63 956 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 CCDC82Q8N4S0 544 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 SRBD1Q8N5C6 995 aaKnown RBP10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 NEDD1Q8NHV4 660 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 SHISA4Q96DD7 197 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 TNMDQ9H2S6 317 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 GOLPH3LQ9H4A5 285 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 MKNK2Q9HBH9 465 aa10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.86□□□□□ -0.67
MTHFD1-203ENST00000553391 WDHD1O75717 1129 aaPredicted RBP10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 PLEKHA8P1O95397 391 aa10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 CCDC192P0DO97 292 aa10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 ME1P48163 572 aa10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 TOB1P50616 345 aaPredicted RBP10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 AKAP17AQ02040 695 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 FAM160A1Q05DH4 1040 aa10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 SAFBQ15424 915 aaKnown RBP eCLIP10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 SF3A1Q15459 793 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 CAMK4Q16566 473 aa10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 DIS3L2Q8IYB7 885 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 FMR1NBQ8N0W7 255 aaPredicted RBP10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 FSIP1Q8NA03 581 aa10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 RNF214Q8ND24 703 aa10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 ANP32BQ92688 251 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 ZNF287Q9HBT7 754 aa10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 SAP30BPQ9UHR5 308 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 KCNJ14Q9UNX9 436 aa10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 MORC2Q9Y6X9 1032 aaPredicted RBP10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 ANKRD31Q8N7Z5 1873 aa10.85□□□□□ -0.67
MTHFD1-203ENST00000553391 MYH13Q9UKX3 1938 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 USP17L3A6NCW0 530 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 USP17L4A6NCW7 530 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 CHRNA5P30532 468 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 HDLBPQ00341 1268 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 GABPAQ06546 454 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 GRM4Q14833 912 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 STRIP1Q5VSL9 837 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 APOBEC3HQ6NTF7 200 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 USP17L1Q7RTZ2 530 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 NOSTRINQ8IVI9 506 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 CTCFLQ8NI51 663 aaPredicted RBP10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 MRPS27Q92552 414 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 PHF20Q9BVI0 1012 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 MXD3Q9BW11 206 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 KCNQ5Q9NR82 932 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 USP40Q9NVE5 1235 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 TTF2Q9UNY4 1162 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 MRVI1Q9Y6F6 885 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 DUOX1Q9NRD9 1551 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 LRRC37AA6NMS7 1700 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 LTBP1Q14766 1721 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 FLT1P17948 1338 aa10.84□□□□□ -0.67
MTHFD1-203ENST00000553391 PALM3A6NDB9 673 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-203ENST00000553391 G3V3G9 751 aa10.83□□□□□ -0.68
MTHFD1-203ENST00000553391 XBP1P17861 261 aa10.83□□□□□ -0.68
MTHFD1-203ENST00000553391 KIF5BP33176 963 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms