RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 SLC6A19Q695T7 634 aa8.12□□□□□ -1.11
ATXN3-217ENST00000553287 MCATQ8IVS2 390 aaKnown RBP8.12□□□□□ -1.11
ATXN3-217ENST00000553287 BACH2Q9BYV9 841 aa8.12□□□□□ -1.11
ATXN3-217ENST00000553287 PRDM5Q9NQX1 630 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-217ENST00000553287 VAV3Q9UKW4 847 aa8.12□□□□□ -1.11
ATXN3-217ENST00000553287 TPX2Q9ULW0 747 aaKnown RBP8.12□□□□□ -1.11
ATXN3-217ENST00000553287 CNTNAP4Q9C0A0 1308 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 TMEM265A0A087WTH1 108 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 CEACAM5P06731 702 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 PLCG1P19174 1290 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 IRAK1P51617 712 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 LDLRAD1Q5T700 205 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 LETMD1Q6P1Q0 360 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 FBXL19Q6PCT2 694 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 HS2ST1Q7LGA3 356 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 SPRED2Q7Z698 418 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 MRPL41Q8IXM3 137 aaKnown RBP8.11□□□□□ -1.11
ATXN3-217ENST00000553287 ABI1Q8IZP0 508 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 STK11IPQ8N1F8 1099 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 MISP3Q96FF7 219 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 TMEM87BQ96K49 555 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 PAK6Q9NQU5 681 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-217ENST00000553287 ADAM30Q9UKF2 790 aa8.11□□□□□ -1.11
ATXN3-217ENST00000553287 GNAT3A8MTJ3 354 aa8.1□□□□□ -1.11
ATXN3-217ENST00000553287 GARTP22102 1010 aa8.1□□□□□ -1.11
ATXN3-217ENST00000553287 EIF4A3P38919 411 aaKnown RBP8.1□□□□□ -1.11
ATXN3-217ENST00000553287 PRKCQQ04759 706 aa8.1□□□□□ -1.11
ATXN3-217ENST00000553287 AOC3Q16853 763 aa8.1□□□□□ -1.11
ATXN3-217ENST00000553287 FBXO27Q8NI29 283 aa8.1□□□□□ -1.11
ATXN3-217ENST00000553287 ACSF2Q96CM8 615 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-217ENST00000553287 DPH2Q9BQC3 489 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-217ENST00000553287 SNX11Q9Y5W9 270 aa8.1□□□□□ -1.11
ATXN3-217ENST00000553287 UPK3BL1B0FP48 263 aa8.09□□□□□ -1.11
ATXN3-217ENST00000553287 UPK3BL2E5RIL1 263 aa8.09□□□□□ -1.11
ATXN3-217ENST00000553287 TLR3O15455 904 aaKnown RBP8.09□□□□□ -1.11
ATXN3-217ENST00000553287 SFRP5Q5T4F7 317 aa8.09□□□□□ -1.11
ATXN3-217ENST00000553287 ZNF574Q6ZN55 896 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-217ENST00000553287 FAM196AQ6ZSG2 479 aa8.09□□□□□ -1.11
ATXN3-217ENST00000553287 CDH24Q86UP0 819 aa8.09□□□□□ -1.11
ATXN3-217ENST00000553287 ZNF296Q8WUU4 475 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-217ENST00000553287 HRASLS5Q96KN8 279 aa8.09□□□□□ -1.11
ATXN3-217ENST00000553287 MAPK8IP1Q9UQF2 711 aa8.09□□□□□ -1.11
ATXN3-217ENST00000553287 GREM1O60565 184 aa8.08□□□□□ -1.12
ATXN3-217ENST00000553287 MPP2Q14168 576 aa8.08□□□□□ -1.12
ATXN3-217ENST00000553287 NKPD1Q17RQ9 610 aa8.08□□□□□ -1.12
ATXN3-217ENST00000553287 AGBL5Q8NDL9 886 aa8.08□□□□□ -1.12
ATXN3-217ENST00000553287 TNKS2Q9H2K2 1166 aa8.08□□□□□ -1.12
ATXN3-217ENST00000553287 ADGRE2Q9UHX3 823 aa8.08□□□□□ -1.12
ATXN3-217ENST00000553287 POLR3KQ9Y2Y1 108 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-217ENST00000553287 SUPT16HQ9Y5B9 1047 aaKnown RBP8.08□□□□□ -1.12
ATXN3-217ENST00000553287 PRR33A8MZF0 331 aa8.07□□□□□ -1.12
ATXN3-217ENST00000553287 GRIN3BO60391 1043 aa8.07□□□□□ -1.12
ATXN3-217ENST00000553287 CBX7O95931 251 aa8.07□□□□□ -1.12
ATXN3-217ENST00000553287 CD8BP10966 210 aa8.07□□□□□ -1.12
ATXN3-217ENST00000553287 CD96P40200 585 aa8.07□□□□□ -1.12
ATXN3-217ENST00000553287 TMEM201Q5SNT2 666 aa8.07□□□□□ -1.12
ATXN3-217ENST00000553287 SPACA3Q8IXA5 215 aa8.07□□□□□ -1.12
ATXN3-217ENST00000553287 KCNQ5Q9NR82 932 aa8.07□□□□□ -1.12
ATXN3-217ENST00000553287 ROBO2Q9HCK4 1378 aa8.07□□□□□ -1.12
ATXN3-217ENST00000553287 PRR36Q9H6K5 1346 aa8.06□□□□□ -1.12
ATXN3-217ENST00000553287 FAM155AB1AL88 458 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-217ENST00000553287 CYP7A1P22680 504 aa8.06□□□□□ -1.12
ATXN3-217ENST00000553287 CWF19L2Q2TBE0 894 aaKnown RBP8.06□□□□□ -1.12
ATXN3-217ENST00000553287 ZNF746Q6NUN9 644 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-217ENST00000553287 REC114Q7Z4M0 266 aa8.06□□□□□ -1.12
ATXN3-217ENST00000553287 FAM13CQ8NE31 585 aa8.06□□□□□ -1.12
ATXN3-217ENST00000553287 REV1Q9UBZ9 1251 aa8.06□□□□□ -1.12
ATXN3-217ENST00000553287 ADAMTS1Q9UHI8 967 aa8.06□□□□□ -1.12
ATXN3-217ENST00000553287 CEP131Q9UPN4 1083 aa8.06□□□□□ -1.12
ATXN3-217ENST00000553287 COL17A1Q9UMD9 1497 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-217ENST00000553287 RBAK-RBAKDNI3L0D1 243 aa8.05□□□□□ -1.12
ATXN3-217ENST00000553287 HTR3BO95264 441 aa8.05□□□□□ -1.12
ATXN3-217ENST00000553287 TAL1P17542 331 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-217ENST00000553287 ZNF76P36508 570 aa8.05□□□□□ -1.12
ATXN3-217ENST00000553287 YARSP54577 528 aaKnown RBP8.05□□□□□ -1.12
ATXN3-217ENST00000553287 PLCL1Q15111 1095 aa8.05□□□□□ -1.12
ATXN3-217ENST00000553287 WFDC3Q8IUB2 231 aa8.05□□□□□ -1.12
ATXN3-217ENST00000553287 ASB11Q8WXH4 323 aa8.05□□□□□ -1.12
ATXN3-217ENST00000553287 BRMS1Q9HCU9 246 aa8.05□□□□□ -1.12
ATXN3-217ENST00000553287 CHURC1-FNTBB4DL54 471 aa8.04□□□□□ -1.12
ATXN3-217ENST00000553287 CDKAL1Q5VV42 579 aa8.04□□□□□ -1.12
ATXN3-217ENST00000553287 MCTP1Q6DN14 999 aa8.04□□□□□ -1.12
ATXN3-217ENST00000553287 HSPA12BQ96MM6 686 aa8.04□□□□□ -1.12
ATXN3-217ENST00000553287 RB1CC1Q8TDY2 1594 aa8.03□□□□□ -1.12
ATXN3-217ENST00000553287 ZNF865P0CJ78 1059 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-217ENST00000553287 ETV3P41162 512 aa8.03□□□□□ -1.12
ATXN3-217ENST00000553287 CLCN7P51798 805 aa8.03□□□□□ -1.12
ATXN3-217ENST00000553287 C22orf34Q6ZV56 151 aa8.03□□□□□ -1.12
ATXN3-217ENST00000553287 MFSD4AQ8N468 514 aa8.03□□□□□ -1.12
ATXN3-217ENST00000553287 DNAJB8Q8NHS0 232 aa8.03□□□□□ -1.12
ATXN3-217ENST00000553287 UBP1Q9NZI7 540 aa8.03□□□□□ -1.12
ATXN3-217ENST00000553287 KLHL3Q9UH77 587 aa8.03□□□□□ -1.12
ATXN3-217ENST00000553287 FUT4P22083 530 aa8.02□□□□□ -1.13
ATXN3-217ENST00000553287 CRKP46108 304 aa8.02□□□□□ -1.13
ATXN3-217ENST00000553287 FANCCQ00597 558 aa8.02□□□□□ -1.13
ATXN3-217ENST00000553287 SEZ6Q53EL9 994 aa8.02□□□□□ -1.13
ATXN3-217ENST00000553287 SLFN12Q8IYM2 578 aa8.02□□□□□ -1.13
ATXN3-217ENST00000553287 PI4K2BQ8TCG2 481 aa8.02□□□□□ -1.13
ATXN3-217ENST00000553287 PPP1R13LQ8WUF5 828 aa8.02□□□□□ -1.13
ATXN3-217ENST00000553287 CYB5D2Q8WUJ1 264 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms