RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 CYP7A1P22680 504 aa11.47□□□□□ -0.57
CHD8-203ENST00000553283 GPRC5AQ8NFJ5 357 aa11.47□□□□□ -0.57
CHD8-203ENST00000553283 EAF2Q96CJ1 260 aaPredicted RBP11.47□□□□□ -0.57
CHD8-203ENST00000553283 PAWRQ96IZ0 340 aaKnown RBP11.47□□□□□ -0.57
CHD8-203ENST00000553283 CCDC8Q9H0W5 538 aaPredicted RBP11.47□□□□□ -0.57
CHD8-203ENST00000553283 C1orf115Q9H7X2 142 aa11.47□□□□□ -0.57
CHD8-203ENST00000553283 DBNLQ9UJU6 430 aaKnown RBP11.47□□□□□ -0.57
CHD8-203ENST00000553283 DOCK3Q8IZD9 2030 aa11.47□□□□□ -0.57
CHD8-203ENST00000553283 RPTORQ8N122 1335 aa11.46□□□□□ -0.57
CHD8-203ENST00000553283 GDF11O95390 407 aa11.46□□□□□ -0.57
CHD8-203ENST00000553283 HLA-DOAP06340 250 aa11.46□□□□□ -0.57
CHD8-203ENST00000553283 HERVK_113P62684 666 aa11.46□□□□□ -0.57
CHD8-203ENST00000553283 DYNLL1P63167 89 aaKnown RBP11.46□□□□□ -0.57
CHD8-203ENST00000553283 SHROOM1Q2M3G4 852 aaPredicted RBP11.46□□□□□ -0.57
CHD8-203ENST00000553283 NECAB2Q7Z6G3 386 aa11.46□□□□□ -0.57
CHD8-203ENST00000553283 FTSJ3Q8IY81 847 aaKnown RBP11.46□□□□□ -0.57
CHD8-203ENST00000553283 ANKLE1Q8NAG6 615 aa11.46□□□□□ -0.57
CHD8-203ENST00000553283 TXNRD2Q9NNW7 524 aa11.46□□□□□ -0.57
CHD8-203ENST00000553283 HMX1Q9NP08 348 aaPredicted RBP11.46□□□□□ -0.57
CHD8-203ENST00000553283 TLR7Q9NYK1 1049 aaKnown RBP11.46□□□□□ -0.57
CHD8-203ENST00000553283 RBPJLQ9UBG7 517 aa11.46□□□□□ -0.57
CHD8-203ENST00000553283 SAP30BPQ9UHR5 308 aaKnown RBP11.46□□□□□ -0.57
CHD8-203ENST00000553283 ZBTB21Q9ULJ3 1066 aa11.46□□□□□ -0.57
CHD8-203ENST00000553283 PEX10O60683 326 aa11.45□□□□□ -0.58
CHD8-203ENST00000553283 IDH1O75874 414 aaKnown RBP11.45□□□□□ -0.58
CHD8-203ENST00000553283 RLBP1P12271 317 aa11.45□□□□□ -0.58
CHD8-203ENST00000553283 XRCC5P13010 732 aaKnown RBP11.45□□□□□ -0.58
CHD8-203ENST00000553283 CYP2B6P20813 491 aa11.45□□□□□ -0.58
CHD8-203ENST00000553283 TRIM32Q13049 653 aa11.45□□□□□ -0.58
CHD8-203ENST00000553283 Q3C1V9 767 aa11.45□□□□□ -0.58
CHD8-203ENST00000553283 TATDN1Q6P1N9 297 aa11.45□□□□□ -0.58
CHD8-203ENST00000553283 TMED8Q6PL24 325 aaPredicted RBP11.45□□□□□ -0.58
CHD8-203ENST00000553283 USP17L2Q6R6M4 530 aa11.45□□□□□ -0.58
CHD8-203ENST00000553283 CERS3Q8IU89 383 aa11.45□□□□□ -0.58
CHD8-203ENST00000553283 ITPRIPQ8IWB1 547 aa11.45□□□□□ -0.58
CHD8-203ENST00000553283 DIS3LQ8TF46 1054 aaKnown RBP11.45□□□□□ -0.58
CHD8-203ENST00000553283 TRIB2Q92519 343 aa11.45□□□□□ -0.58
CHD8-203ENST00000553283 NUDT12Q9BQG2 462 aa11.45□□□□□ -0.58
CHD8-203ENST00000553283 EMILIN3Q9NT22 766 aa11.45□□□□□ -0.58
CHD8-203ENST00000553283 RANBP2P49792 3224 aaKnown RBP11.45□□□□□ -0.58
CHD8-203ENST00000553283 A0A1W2PPC1 479 aa11.44□□□□□ -0.58
CHD8-203ENST00000553283 MAPK4P31152 587 aa11.44□□□□□ -0.58
CHD8-203ENST00000553283 MAP3K21Q5TCX8 1036 aa11.44□□□□□ -0.58
CHD8-203ENST00000553283 MAGEB6Q8N7X4 407 aa11.44□□□□□ -0.58
CHD8-203ENST00000553283 MIGA1Q8NAN2 632 aa11.44□□□□□ -0.58
CHD8-203ENST00000553283 GTF3C2Q8WUA4 911 aaPredicted RBP11.44□□□□□ -0.58
CHD8-203ENST00000553283 SOCS4Q8WXH5 440 aa11.44□□□□□ -0.58
CHD8-203ENST00000553283 NBPF3Q9H094 633 aa11.44□□□□□ -0.58
CHD8-203ENST00000553283 LOC285556D6RIA3 1793 aa11.44□□□□□ -0.58
CHD8-203ENST00000553283 GH2P01242 217 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 USP5P45974 858 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 MNX1P50219 401 aaPredicted RBP11.43□□□□□ -0.58
CHD8-203ENST00000553283 ERVK-9P63128 1117 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 ERVK-24P63145 666 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 HNRNPUQ00839 825 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHD8-203ENST00000553283 MAP3K12Q12852 859 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 PDE3AQ14432 1141 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 CEP85Q6P2H3 762 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 POTEEQ6S8J3 1075 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 TTC6Q86TZ1 520 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 ERC1Q8IUD2 1116 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 CCAR1Q8IX12 1150 aaKnown RBP11.43□□□□□ -0.58
CHD8-203ENST00000553283 TRMT44Q8IYL2 757 aaKnown RBP11.43□□□□□ -0.58
CHD8-203ENST00000553283 USP6NLQ92738 828 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 C12orf42Q96LP6 360 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 EHD4Q9H223 541 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 ANTXR1Q9H6X2 564 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 STAP2Q9UGK3 403 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 SERPINB13Q9UIV8 391 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 OGDHLQ9ULD0 1010 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 NDUFB9Q9Y6M9 179 aa11.43□□□□□ -0.58
CHD8-203ENST00000553283 USP17L15C9J2P7 530 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 USP17L13C9JLJ4 530 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 USP17L11C9JVI0 530 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 USP17L18D6R9N7 530 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 USP17L22D6RA61 530 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 USP17L17D6RBQ6 530 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 USP17L19D6RCP7 530 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 USP17L20D6RJB6 530 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 PRKAR2AP13861 404 aaKnown RBP11.42□□□□□ -0.58
CHD8-203ENST00000553283 USP17L24Q0WX57 530 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 CERKLQ49MI3 558 aaPredicted RBP11.42□□□□□ -0.58
CHD8-203ENST00000553283 MORN1Q5T089 497 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 GPR142Q7Z601 462 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 PLEKHH3Q7Z736 793 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 AACSQ86V21 672 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 PAGR1Q9BTK6 254 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 PORCNQ9H237 461 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 EXOC6BQ9Y2D4 811 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 RABGAP1Q9Y3P9 1069 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 SIPA1L1O43166 1804 aa11.42□□□□□ -0.58
CHD8-203ENST00000553283 ZKSCAN1P17029 563 aaPredicted RBP11.41□□□□□ -0.58
CHD8-203ENST00000553283 RGS2P41220 211 aa11.41□□□□□ -0.58
CHD8-203ENST00000553283 USP14P54578 494 aa11.41□□□□□ -0.58
CHD8-203ENST00000553283 CACNB2Q08289 660 aaPredicted RBP11.41□□□□□ -0.58
CHD8-203ENST00000553283 ABCB5Q2M3G0 1257 aa11.41□□□□□ -0.58
CHD8-203ENST00000553283 CATSPERGQ6ZRH7 1159 aa11.41□□□□□ -0.58
CHD8-203ENST00000553283 FEZ1Q99689 392 aa11.41□□□□□ -0.58
CHD8-203ENST00000553283 RIOK1Q9BRS2 568 aaKnown RBP11.41□□□□□ -0.58
CHD8-203ENST00000553283 KIAA1683Q9H0B3 1180 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms