RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 DSCC1Q9BVC3 393 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 ZNF341Q9BYN7 854 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 ZNF408Q9H9D4 720 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 MCM9Q9NXL9 1143 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.2□□□□□ -0.94
NPAS3-213ENST00000552874 PI4KBQ9UBF8 816 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 HERC5Q9UII4 1024 aaKnown RBP9.2□□□□□ -0.94
NPAS3-213ENST00000552874 ANAPC4Q9UJX5 808 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 TAOK2Q9UL54 1235 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 TAF6LQ9Y6J9 622 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 LCTP09848 1927 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 UBE2Q2LH0YL09 131 aa9.19□□□□□ -0.94
NPAS3-213ENST00000552874 FGAP02671 866 aa9.19□□□□□ -0.94
NPAS3-213ENST00000552874 FGRP09769 529 aa9.19□□□□□ -0.94
NPAS3-213ENST00000552874 GUCY1A2P33402 732 aa9.19□□□□□ -0.94
NPAS3-213ENST00000552874 HUNKP57058 714 aa9.19□□□□□ -0.94
NPAS3-213ENST00000552874 DCAF15Q66K64 600 aa9.19□□□□□ -0.94
NPAS3-213ENST00000552874 DYNLL2Q96FJ2 89 aa9.19□□□□□ -0.94
NPAS3-213ENST00000552874 WRNIP1Q96S55 665 aa9.19□□□□□ -0.94
NPAS3-213ENST00000552874 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.19□□□□□ -0.94
NPAS3-213ENST00000552874 SERPINB13Q9UIV8 391 aa9.19□□□□□ -0.94
NPAS3-213ENST00000552874 ANGEL1Q9UNK9 670 aaKnown RBP9.19□□□□□ -0.94
NPAS3-213ENST00000552874 SPDYE5A6NIY4 337 aa9.18□□□□□ -0.94
NPAS3-213ENST00000552874 RASA1P20936 1047 aa9.18□□□□□ -0.94
NPAS3-213ENST00000552874 NF2P35240 595 aa9.18□□□□□ -0.94
NPAS3-213ENST00000552874 PPARAQ07869 468 aa9.18□□□□□ -0.94
NPAS3-213ENST00000552874 MOGSQ13724 837 aa9.18□□□□□ -0.94
NPAS3-213ENST00000552874 PRKG1Q13976 671 aa9.18□□□□□ -0.94
NPAS3-213ENST00000552874 COL9A3Q14050 684 aaPredicted RBP9.18□□□□□ -0.94
NPAS3-213ENST00000552874 ARMC9Q7Z3E5 817 aa9.18□□□□□ -0.94
NPAS3-213ENST00000552874 SCYL3Q8IZE3 742 aa9.18□□□□□ -0.94
NPAS3-213ENST00000552874 ZKSCAN4Q969J2 545 aaPredicted RBP9.18□□□□□ -0.94
NPAS3-213ENST00000552874 HOOK2Q96ED9 719 aa9.18□□□□□ -0.94
NPAS3-213ENST00000552874 WNK4Q96J92 1243 aa9.18□□□□□ -0.94
NPAS3-213ENST00000552874 ZIC5Q96T25 663 aa9.18□□□□□ -0.94
NPAS3-213ENST00000552874 ZBTB21Q9ULJ3 1066 aa9.18□□□□□ -0.94
NPAS3-213ENST00000552874 BAZ2BQ9UIF8 2168 aaKnown RBP9.17□□□□□ -0.94
NPAS3-213ENST00000552874 CASP8AP2Q9UKL3 1982 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 NEDD4P46934 1319 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 IGKV6D-41A0A0C4DH26 115 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 PPP1R12BO60237 982 aaPredicted RBP9.17□□□□□ -0.94
NPAS3-213ENST00000552874 HLA-DOAP06340 250 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 CAP2P40123 477 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 IREB2P48200 963 aaKnown RBP9.17□□□□□ -0.94
NPAS3-213ENST00000552874 TDO2P48775 406 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 CDK8P49336 464 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 MAP3K9P80192 1104 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 C8orf34Q49A92 452 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 CYP4F22Q6NT55 531 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 RGMBQ6NW40 437 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 STOX1Q6ZVD7 989 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 TTC6Q86TZ1 520 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 FOXP4Q8IVH2 680 aaPredicted RBP9.17□□□□□ -0.94
NPAS3-213ENST00000552874 ZSCAN29Q8IWY8 852 aaPredicted RBP9.17□□□□□ -0.94
NPAS3-213ENST00000552874 ANKRD13AQ8IZ07 590 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 C2orf69Q8N8R5 385 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 MAP4K1Q92918 833 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 NAPBQ9H115 298 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.17□□□□□ -0.94
NPAS3-213ENST00000552874 SWAP70Q9UH65 585 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 KCNH4Q9UQ05 1017 aa9.17□□□□□ -0.94
NPAS3-213ENST00000552874 ZNFX1Q9P2E3 1918 aaKnown RBP9.17□□□□□ -0.94
NPAS3-213ENST00000552874 ORC4O43929 436 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 CTNND1O60716 968 aaKnown RBP9.16□□□□□ -0.94
NPAS3-213ENST00000552874 GDF11O95390 407 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 CYP21A2P08686 494 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 AKR1B1P15121 316 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 PTPRAP18433 802 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 NOVP48745 357 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 VEGFBP49765 207 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 MFAP1P55081 439 aaKnown RBP9.16□□□□□ -0.94
NPAS3-213ENST00000552874 CTDSPL2Q05D32 466 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 PPIL2Q13356 520 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 SPRYD7Q5W111 196 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 CCDC84Q86UT8 332 aaPredicted RBP9.16□□□□□ -0.94
NPAS3-213ENST00000552874 CLEC10AQ8IUN9 316 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 SIAH1Q8IUQ4 282 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 STAG1Q8WVM7 1258 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 RUFY2Q8WXA3 655 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 KCNB2Q92953 911 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 MS4A4AQ96JQ5 239 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 CAPNS2Q96L46 248 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 TSPYL2Q9H2G4 693 aaPredicted RBP9.16□□□□□ -0.94
NPAS3-213ENST00000552874 ELP3Q9H9T3 547 aa9.16□□□□□ -0.94
NPAS3-213ENST00000552874 ABT1Q9ULW3 272 aaKnown RBP9.16□□□□□ -0.94
NPAS3-213ENST00000552874 PLXNA1Q9UIW2 1896 aa9.15□□□□□ -0.94
NPAS3-213ENST00000552874 ZNF236Q9UL36 1845 aa9.15□□□□□ -0.94
NPAS3-213ENST00000552874 TESPA1A2RU30 521 aaPredicted RBP9.15□□□□□ -0.94
NPAS3-213ENST00000552874 POLR3DP05423 398 aaPredicted RBP9.15□□□□□ -0.94
NPAS3-213ENST00000552874 ZBTB48P10074 688 aaPredicted RBP9.15□□□□□ -0.94
NPAS3-213ENST00000552874 HAND2P61296 217 aa9.15□□□□□ -0.94
NPAS3-213ENST00000552874 NECTIN1Q15223 517 aa9.15□□□□□ -0.94
NPAS3-213ENST00000552874 JMYQ8N9B5 988 aa9.15□□□□□ -0.94
NPAS3-213ENST00000552874 OPTNQ96CV9 577 aa9.15□□□□□ -0.94
NPAS3-213ENST00000552874 NACAP1Q9BZK3 213 aa9.15□□□□□ -0.94
NPAS3-213ENST00000552874 INCENPQ9NQS7 918 aa9.15□□□□□ -0.94
NPAS3-213ENST00000552874 GINM1Q9NU53 330 aa9.15□□□□□ -0.94
NPAS3-213ENST00000552874 AFG3L2Q9Y4W6 797 aa9.15□□□□□ -0.94
NPAS3-213ENST00000552874 RBM8AQ9Y5S9 174 aaKnown RBP9.15□□□□□ -0.94
NPAS3-213ENST00000552874 LRRC37A2A6NM11 1700 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms