RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 DDAH1O94760 285 aa16.2■□□□□ 0.18
RAB3IP-216ENST00000552199 USP17L8P0C7I0 530 aa16.2■□□□□ 0.18
RAB3IP-216ENST00000552199 MARCKSP29966 332 aaPredicted RBP16.2■□□□□ 0.18
RAB3IP-216ENST00000552199 USP5P45974 858 aa16.2■□□□□ 0.18
RAB3IP-216ENST00000552199 ZNF165P49910 485 aa16.2■□□□□ 0.18
RAB3IP-216ENST00000552199 PLCB2Q00722 1185 aa16.2■□□□□ 0.18
RAB3IP-216ENST00000552199 DIXDC1Q155Q3 683 aa16.2■□□□□ 0.18
RAB3IP-216ENST00000552199 C12orf60Q5U649 245 aa16.2■□□□□ 0.18
RAB3IP-216ENST00000552199 DIS3L2Q8IYB7 885 aaKnown RBP16.2■□□□□ 0.18
RAB3IP-216ENST00000552199 FOXP1Q9H334 677 aaPredicted RBP16.2■□□□□ 0.18
RAB3IP-216ENST00000552199 PRPF3O43395 683 aaKnown RBP16.19■□□□□ 0.18
RAB3IP-216ENST00000552199 AKAP17AQ02040 695 aaKnown RBP16.19■□□□□ 0.18
RAB3IP-216ENST00000552199 STX1AQ16623 288 aa16.19■□□□□ 0.18
RAB3IP-216ENST00000552199 FAM47AQ5JRC9 791 aa16.19■□□□□ 0.18
RAB3IP-216ENST00000552199 TMC4Q7Z404 712 aa16.19■□□□□ 0.18
RAB3IP-216ENST00000552199 TBC1D16Q8TBP0 767 aa16.19■□□□□ 0.18
RAB3IP-216ENST00000552199 SDF4Q9BRK5 362 aa16.19■□□□□ 0.18
RAB3IP-216ENST00000552199 NOL10Q9BSC4 688 aaKnown RBP16.19■□□□□ 0.18
RAB3IP-216ENST00000552199 POLLQ9UGP5 575 aa16.19■□□□□ 0.18
RAB3IP-216ENST00000552199 MROH7-TTC4A0A0A0MT08 1334 aa16.19■□□□□ 0.18
RAB3IP-216ENST00000552199 NT5C2P49902 561 aa16.19■□□□□ 0.18
RAB3IP-216ENST00000552199 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.19■□□□□ 0.18
RAB3IP-216ENST00000552199 LRRC37AA6NMS7 1700 aa16.18■□□□□ 0.18
RAB3IP-216ENST00000552199 PLSCR1O15162 318 aa16.18■□□□□ 0.18
RAB3IP-216ENST00000552199 ZNF500O60304 480 aaPredicted RBP16.18■□□□□ 0.18
RAB3IP-216ENST00000552199 NMT2O60551 498 aa16.18■□□□□ 0.18
RAB3IP-216ENST00000552199 ZNF202O95125 648 aa16.18■□□□□ 0.18
RAB3IP-216ENST00000552199 PFKFB1P16118 471 aa16.18■□□□□ 0.18
RAB3IP-216ENST00000552199 PKN1Q16512 942 aa16.18■□□□□ 0.18
RAB3IP-216ENST00000552199 CERS3Q8IU89 383 aa16.18■□□□□ 0.18
RAB3IP-216ENST00000552199 SP8Q8IXZ3 490 aa16.18■□□□□ 0.18
RAB3IP-216ENST00000552199 ANKRD31Q8N7Z5 1873 aa16.18■□□□□ 0.18
RAB3IP-216ENST00000552199 EP400Q96L91 3159 aa16.18■□□□□ 0.18
RAB3IP-216ENST00000552199 LTBP1Q14766 1721 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 TSPY2A6NKD2 308 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 PLEKHA8P1O95397 391 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 RBM6P78332 1123 aaKnown RBP16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 ZNF827Q17R98 1081 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 TMTC3Q6ZXV5 915 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 AKT1S1Q96B36 256 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 RTFDC1Q9BY42 306 aaPredicted RBP16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 ANO10Q9NW15 660 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 ROBO3Q96MS0 1386 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 NAV1Q8NEY1 1877 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 FAM237AA0A1B0GTK4 181 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 CUTAO60888 179 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 XBP1P17861 261 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 TOB1P50616 345 aaPredicted RBP16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 IQCB1Q15051 598 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 RILPL1Q5EBL4 403 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 C11orf57Q6ZUT1 292 aaPredicted RBP16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 NLGN1Q8N2Q7 840 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 TGFBRAP1Q8WUH2 860 aa16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 V9GY48 417 aaPredicted RBP16.17■□□□□ 0.18
RAB3IP-216ENST00000552199 GPR75-ASB3A0A0A6YYF3 556 aa16.16■□□□□ 0.18
RAB3IP-216ENST00000552199 C6orf229H3BNL8 230 aa16.16■□□□□ 0.18
RAB3IP-216ENST00000552199 PPEF1O14829 653 aaPredicted RBP16.16■□□□□ 0.18
RAB3IP-216ENST00000552199 SHC4Q6S5L8 630 aa16.16■□□□□ 0.18
RAB3IP-216ENST00000552199 COL23A1Q86Y22 540 aaPredicted RBP16.16■□□□□ 0.18
RAB3IP-216ENST00000552199 AMOTL1Q8IY63 956 aa16.16■□□□□ 0.18
RAB3IP-216ENST00000552199 CTCFLQ8NI51 663 aaPredicted RBP16.16■□□□□ 0.18
RAB3IP-216ENST00000552199 SHISA4Q96DD7 197 aa16.16■□□□□ 0.18
RAB3IP-216ENST00000552199 TIGD1Q96MW7 591 aa16.16■□□□□ 0.18
RAB3IP-216ENST00000552199 KIAA1468Q9P260 1216 aa16.16■□□□□ 0.18
RAB3IP-216ENST00000552199 HPSEQ9Y251 543 aa16.16■□□□□ 0.18
RAB3IP-216ENST00000552199 NRXN2Q9P2S2 1712 aa16.16■□□□□ 0.18
RAB3IP-216ENST00000552199 CDK5RAP2Q96SN8 1893 aa16.16■□□□□ 0.18
RAB3IP-216ENST00000552199 TFAP4Q01664 338 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 NR5A1Q13285 461 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 SLC4A8Q2Y0W8 1093 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 RESP18Q5W5W9 173 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 RCSD1Q6JBY9 416 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 OXER1Q8TDS5 423 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 TBC1D22AQ8WUA7 517 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 DYNLL2Q96FJ2 89 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 PHF20Q9BVI0 1012 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 FAM205AQ6ZU69 1335 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 BTDP43251 543 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 SYKP43405 635 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 SRBD1Q8N5C6 995 aaKnown RBP16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 ANKS1AQ92625 1134 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 ERCC4Q92889 916 aaPredicted RBP16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 FAM163AQ96GL9 167 aaPredicted RBP16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 VPS54Q9P1Q0 977 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 ATP6V0A2Q9Y487 856 aa16.15■□□□□ 0.18
RAB3IP-216ENST00000552199 CNTNAP5Q8WYK1 1306 aa16.14■□□□□ 0.17
RAB3IP-216ENST00000552199 APBA3O96018 575 aa16.14■□□□□ 0.17
RAB3IP-216ENST00000552199 CCDC178Q5BJE1 867 aa16.14■□□□□ 0.17
RAB3IP-216ENST00000552199 MFSD14BQ5SR56 506 aa16.14■□□□□ 0.17
RAB3IP-216ENST00000552199 ZNF772Q68DY9 489 aaPredicted RBP16.14■□□□□ 0.17
RAB3IP-216ENST00000552199 DGKHQ86XP1 1220 aa16.14■□□□□ 0.17
RAB3IP-216ENST00000552199 MAPKAPK5Q8IW41 473 aa16.14■□□□□ 0.17
RAB3IP-216ENST00000552199 SLF2Q8IX21 1173 aa16.14■□□□□ 0.17
RAB3IP-216ENST00000552199 MPNDQ8N594 471 aa16.14■□□□□ 0.17
RAB3IP-216ENST00000552199 KRI1Q8N9T8 703 aaKnown RBP16.14■□□□□ 0.17
RAB3IP-216ENST00000552199 CLIC6Q96NY7 704 aa16.14■□□□□ 0.17
RAB3IP-216ENST00000552199 MKNK2Q9HBH9 465 aa16.14■□□□□ 0.17
RAB3IP-216ENST00000552199 IL17RBQ9NRM6 502 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms