RNA–Protein interactions for RNA: ENST00000551310.1

ATP2B1-209, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-209ENST00000551310 MORF4L1Q9UBU8 362 aa19.6■□□□□ 0.73
ATP2B1-209ENST00000551310 GJD2Q9UKL4 321 aa19.6■□□□□ 0.73
ATP2B1-209ENST00000551310 USP17L10C9JJH3 530 aa19.59■□□□□ 0.73
ATP2B1-209ENST00000551310 FARP2O94887 1054 aaPredicted RBP19.59■□□□□ 0.73
ATP2B1-209ENST00000551310 HLA-DOAP06340 250 aa19.59■□□□□ 0.73
ATP2B1-209ENST00000551310 DYNLL1P63167 89 aaKnown RBP19.59■□□□□ 0.73
ATP2B1-209ENST00000551310 DEFB118Q96PH6 123 aa19.59■□□□□ 0.73
ATP2B1-209ENST00000551310 LOC285556D6RIA3 1793 aa19.58■□□□□ 0.73
ATP2B1-209ENST00000551310 IDH1O75874 414 aaKnown RBP19.58■□□□□ 0.72
ATP2B1-209ENST00000551310 TFRCP02786 760 aaKnown RBP19.58■□□□□ 0.72
ATP2B1-209ENST00000551310 IRX3P78415 501 aaPredicted RBP19.58■□□□□ 0.72
ATP2B1-209ENST00000551310 ERC1Q8IUD2 1116 aa19.58■□□□□ 0.72
ATP2B1-209ENST00000551310 P2RX7Q99572 595 aaKnown RBP19.58■□□□□ 0.72
ATP2B1-209ENST00000551310 CRISPLD2Q9H0B8 497 aa19.58■□□□□ 0.72
ATP2B1-209ENST00000551310 SAP30BPQ9UHR5 308 aaKnown RBP19.58■□□□□ 0.72
ATP2B1-209ENST00000551310 TAOK2Q9UL54 1235 aa19.58■□□□□ 0.72
ATP2B1-209ENST00000551310 ZBTB21Q9ULJ3 1066 aa19.58■□□□□ 0.72
ATP2B1-209ENST00000551310 SZT2Q5T011 3432 aa19.57■□□□□ 0.72
ATP2B1-209ENST00000551310 NR2E3Q9Y5X4 410 aa19.57■□□□□ 0.72
ATP2B1-209ENST00000551310 SIPA1L1O43166 1804 aa19.57■□□□□ 0.72
ATP2B1-209ENST00000551310 ATAD5Q96QE3 1844 aa19.57■□□□□ 0.72
ATP2B1-209ENST00000551310 MAST2Q6P0Q8 1798 aa19.57■□□□□ 0.72
ATP2B1-209ENST00000551310 GDF11O95390 407 aa19.56■□□□□ 0.72
ATP2B1-209ENST00000551310 HMGCRP04035 888 aa19.56■□□□□ 0.72
ATP2B1-209ENST00000551310 MAP3K12Q12852 859 aa19.56■□□□□ 0.72
ATP2B1-209ENST00000551310 SHROOM1Q2M3G4 852 aaPredicted RBP19.56■□□□□ 0.72
ATP2B1-209ENST00000551310 HSP90AB4PQ58FF6 505 aa19.56■□□□□ 0.72
ATP2B1-209ENST00000551310 MAGEB6Q8N7X4 407 aa19.56■□□□□ 0.72
ATP2B1-209ENST00000551310 MIGA1Q8NAN2 632 aa19.56■□□□□ 0.72
ATP2B1-209ENST00000551310 HERVK_113P62684 666 aa19.55■□□□□ 0.72
ATP2B1-209ENST00000551310 TATDN1Q6P1N9 297 aa19.55■□□□□ 0.72
ATP2B1-209ENST00000551310 AACSQ86V21 672 aa19.55■□□□□ 0.72
ATP2B1-209ENST00000551310 GPRC5AQ8NFJ5 357 aa19.55■□□□□ 0.72
ATP2B1-209ENST00000551310 PANK1Q8TE04 598 aa19.55■□□□□ 0.72
ATP2B1-209ENST00000551310 EHD4Q9H223 541 aa19.55■□□□□ 0.72
ATP2B1-209ENST00000551310 ANTXR1Q9H6X2 564 aa19.55■□□□□ 0.72
ATP2B1-209ENST00000551310 EXOC6BQ9Y2D4 811 aa19.55■□□□□ 0.72
ATP2B1-209ENST00000551310 ZBED9Q6R2W3 1325 aa19.54■□□□□ 0.72
ATP2B1-209ENST00000551310 MYO5AQ9Y4I1 1855 aaKnown RBP19.54■□□□□ 0.72
ATP2B1-209ENST00000551310 USP5P45974 858 aa19.54■□□□□ 0.72
ATP2B1-209ENST00000551310 CHRDL2Q6WN34 429 aa19.54■□□□□ 0.72
ATP2B1-209ENST00000551310 GTF3C2Q8WUA4 911 aaPredicted RBP19.54■□□□□ 0.72
ATP2B1-209ENST00000551310 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.54■□□□□ 0.725e-6■■■■■ 39.7
ATP2B1-209ENST00000551310 EMILIN3Q9NT22 766 aa19.54■□□□□ 0.72
ATP2B1-209ENST00000551310 RBPJLQ9UBG7 517 aa19.54■□□□□ 0.72
ATP2B1-209ENST00000551310 SERPINB13Q9UIV8 391 aa19.54■□□□□ 0.72
ATP2B1-209ENST00000551310 NDUFB9Q9Y6M9 179 aa19.54■□□□□ 0.72
ATP2B1-209ENST00000551310 RPTORQ8N122 1335 aa19.53■□□□□ 0.72
ATP2B1-209ENST00000551310 GH2P01242 217 aa19.53■□□□□ 0.72
ATP2B1-209ENST00000551310 MS4A1P11836 297 aa19.53■□□□□ 0.72
ATP2B1-209ENST00000551310 XRCC5P13010 732 aaKnown RBP19.53■□□□□ 0.72
ATP2B1-209ENST00000551310 USP17L2Q6R6M4 530 aa19.53■□□□□ 0.72
ATP2B1-209ENST00000551310 TTC6Q86TZ1 520 aa19.53■□□□□ 0.72
ATP2B1-209ENST00000551310 TXNRD2Q9NNW7 524 aa19.53■□□□□ 0.72
ATP2B1-209ENST00000551310 CDK5RAP2Q96SN8 1893 aa19.53■□□□□ 0.72
ATP2B1-209ENST00000551310 FOCADQ5VW36 1801 aa19.53■□□□□ 0.72
ATP2B1-209ENST00000551310 MAPK4P31152 587 aa19.52■□□□□ 0.72
ATP2B1-209ENST00000551310 TTF1Q15361 905 aaPredicted RBP19.52■□□□□ 0.72
ATP2B1-209ENST00000551310 DIEXFQ68CQ4 756 aaKnown RBP19.52■□□□□ 0.72
ATP2B1-209ENST00000551310 ANKLE1Q8NAG6 615 aa19.52■□□□□ 0.72
ATP2B1-209ENST00000551310 RHPN1Q8TCX5 695 aa19.52■□□□□ 0.72
ATP2B1-209ENST00000551310 C12orf42Q96LP6 360 aa19.52■□□□□ 0.72
ATP2B1-209ENST00000551310 NUDT12Q9BQG2 462 aa19.52■□□□□ 0.72
ATP2B1-209ENST00000551310 RIOK1Q9BRS2 568 aaKnown RBP19.52■□□□□ 0.72
ATP2B1-209ENST00000551310 PRO3102Q9H379 93 aa19.52■□□□□ 0.72
ATP2B1-209ENST00000551310 HMX1Q9NP08 348 aaPredicted RBP19.52■□□□□ 0.72
ATP2B1-209ENST00000551310 RBM27Q9P2N5 1060 aaKnown RBP19.52■□□□□ 0.72
ATP2B1-209ENST00000551310 Q3C1V9 767 aa19.51■□□□□ 0.71
ATP2B1-209ENST00000551310 NECAB2Q7Z6G3 386 aa19.51■□□□□ 0.71
ATP2B1-209ENST00000551310 SOCS4Q8WXH5 440 aa19.51■□□□□ 0.71
ATP2B1-209ENST00000551310 PAWRQ96IZ0 340 aaKnown RBP19.51■□□□□ 0.71
ATP2B1-209ENST00000551310 IL1RAPL2Q9NP60 686 aa19.51■□□□□ 0.71
ATP2B1-209ENST00000551310 EVI5O60447 810 aa19.5■□□□□ 0.71
ATP2B1-209ENST00000551310 PEX10O60683 326 aa19.5■□□□□ 0.71
ATP2B1-209ENST00000551310 CYP2B6P20813 491 aa19.5■□□□□ 0.71
ATP2B1-209ENST00000551310 ERVK-9P63128 1117 aa19.5■□□□□ 0.71
ATP2B1-209ENST00000551310 ERVK-24P63145 666 aa19.5■□□□□ 0.71
ATP2B1-209ENST00000551310 CERKLQ49MI3 558 aaPredicted RBP19.5■□□□□ 0.71
ATP2B1-209ENST00000551310 MAP3K21Q5TCX8 1036 aa19.5■□□□□ 0.71
ATP2B1-209ENST00000551310 POTEEQ6S8J3 1075 aa19.5■□□□□ 0.71
ATP2B1-209ENST00000551310 RPAP2Q8IXW5 612 aaPredicted RBP19.5■□□□□ 0.71
ATP2B1-209ENST00000551310 TRIB2Q92519 343 aa19.5■□□□□ 0.71
ATP2B1-209ENST00000551310 USP6NLQ92738 828 aa19.5■□□□□ 0.71
ATP2B1-209ENST00000551310 LAMA3Q16787 3333 aa19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 USP17L15C9J2P7 530 aa19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 USP17L13C9JLJ4 530 aa19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 USP17L11C9JVI0 530 aa19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 USP17L18D6R9N7 530 aa19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 USP17L22D6RA61 530 aa19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 USP17L17D6RBQ6 530 aa19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 USP17L19D6RCP7 530 aa19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 USP17L20D6RJB6 530 aa19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 PLCD1P51178 756 aa19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 USP14P54578 494 aa19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 USP17L24Q0WX57 530 aa19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 TRIM32Q13049 653 aa19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 TRMT44Q8IYL2 757 aaKnown RBP19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 CLASRPQ8N2M8 674 aaKnown RBP19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 PIAS4Q8N2W9 510 aaPredicted RBP19.49■□□□□ 0.71
ATP2B1-209ENST00000551310 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms