RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 HCN4Q9Y3Q4 1203 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 ATP6V1DQ9Y5K8 247 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 NSD2O96028 1365 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 ADGRB1O14514 1584 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 EXOC5O00471 708 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 VAMP4O75379 141 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 SMC2O95347 1197 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 LIG1P18858 919 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 HSPA4P34932 840 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 LMAN1P49257 510 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 AARSP49588 968 aaKnown RBP eCLIP6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 VEGFBP49765 207 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 ICA1Q05084 483 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 ADCY2Q08462 1091 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 SNW1Q13573 536 aaKnown RBP6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 CRYMQ14894 314 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 ZRSR1Q15695 479 aaKnown RBP6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 DBN1Q16643 649 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 ANO6Q4KMQ2 910 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 CCDC30Q5VVM6 783 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 CDC42BPGQ6DT37 1551 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 TLDC1Q6P9B6 456 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 LEKR1Q6ZMV7 388 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 TTC6Q86TZ1 520 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 FCHSD1Q86WN1 690 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 RPAP2Q8IXW5 612 aaPredicted RBP6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 TRIM22Q8IYM9 498 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 C16orf71Q8IYS4 520 aaPredicted RBP6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 MICALL1Q8N3F8 863 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 OTUD6BQ8N6M0 293 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 MSANTD4Q8NCY6 345 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 MAGEC3Q8TD91 643 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 OTUD7AQ8TE49 926 aaPredicted RBP6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 RAPGEF6Q8TEU7 1601 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 FOXD4L4Q8WXT5 416 aaPredicted RBP6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 NANOS1Q8WY41 292 aaKnown RBP6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 TSR2Q969E8 191 aaKnown RBP6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 AIDAQ96BJ3 306 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 ZNF837Q96EG3 531 aaPredicted RBP6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 TUBGCP6Q96RT7 1819 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 TRIM5Q9C035 493 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 SAP130Q9H0E3 1048 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 NUP62CLQ9H1M0 184 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 RUBCNLQ9H714 662 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 CDK12Q9NYV4 1490 aaPredicted RBP6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 SEPT3Q9UH03 358 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 LRFN2Q9ULH4 789 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 L1RE1Q9UN81 338 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 AKAP2Q9Y2D5 859 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 CHMP3Q9Y3E7 222 aa6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 GPC6Q9Y625 555 aaPredicted RBP6.12□□□□□ -1.43
LSM3P2-201ENST00000551246 GLI2P10070 1586 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 ANKRD18BA2A2Z9 1011 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 TERTO14746 1132 aaKnown RBP6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 SRGAP3O43295 1099 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 PRPF6O94906 941 aaKnown RBP6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 VSIG8P0DPA2 414 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 GCFC2P16383 781 aaKnown RBP6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 ELF1P32519 619 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 USP8P40818 1118 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 SETQ01105 290 aaPredicted RBP6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 TBC1D8BQ0IIM8 1120 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 NFX1Q12986 1120 aaKnown RBP6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 SF3B2Q13435 895 aaKnown RBP6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 RTN1Q16799 776 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 LONRF2Q1L5Z9 754 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 PLEKHO1Q53GL0 409 aaPredicted RBP6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 CASC1Q6TDU7 716 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 AMOTL1Q8IY63 956 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 CCDC150Q8NCX0 1101 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 NGLY1Q96IV0 654 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 PAGR1Q9BTK6 254 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 ARFGAP3Q9NP61 516 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 PDRG1Q9NUG6 133 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 STAP2Q9UGK3 403 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 SPHKAPQ2M3C7 1700 aa6.11□□□□□ -1.43
LSM3P2-201ENST00000551246 KIAA0556O60303 1618 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 PLCH2O75038 1416 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 ADCY9O60503 1353 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 KDRP35968 1356 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 PNPLA6Q8IY17 1366 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 A0A1W2PNR3 127 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 TNFRSF10BO14763 440 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 CTAGE5O15320 804 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 CCP110O43303 1012 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 PTCD1O75127 700 aaKnown RBP6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 COQ9O75208 318 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 CLSTN1O94985 981 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 FSBPO95073 299 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 NEFHP12036 1026 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 TATP17735 454 aaPredicted RBP6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 SSR1P43307 286 aaKnown RBP6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 ZNF165P49910 485 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 EVCP57679 992 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 DNM1Q05193 864 aaKnown RBP6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 ST3GAL1Q11201 340 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 LBRQ14739 615 aaKnown RBP6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 PPP2R5AQ15172 486 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 COX20Q5RI15 118 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms