RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 ABCB5Q2M3G0 1257 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 C12orf60Q5U649 245 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 CASC1Q6TDU7 716 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 IFNL1Q8IU54 200 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 PROCA1Q8NCQ7 364 aaPredicted RBP11.97□□□□□ -0.49
PFDN5-213ENST00000550964 ZNF280CQ8ND82 737 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 SDR42E1Q8WUS8 393 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 WDR18Q9BV38 432 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 ZFYVE28Q9HCC9 887 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 PNMA3Q9UL41 463 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 PHIPQ8WWQ0 1821 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 ZMYM6O95789 1325 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 USP17L12C9JPN9 530 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 USP17L21D6R901 530 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 IRF6O14896 467 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 TRPA1O75762 1119 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 ALX1Q15699 326 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 TMEM179Q6ZVK1 233 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 ANKRD23Q86SG2 305 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 IFNL3Q8IZI9 196 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 MKNK2Q9HBH9 465 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 RNF186Q9NXI6 227 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 TMOD4Q9NZQ9 345 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.96□□□□□ -0.49
PFDN5-213ENST00000550964 CTNNA3Q9UI47 895 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 FZD1Q9UP38 647 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 AFG3L2Q9Y4W6 797 aa11.96□□□□□ -0.49
PFDN5-213ENST00000550964 GSG1L2A8MUP6 293 aa11.95□□□□□ -0.5
PFDN5-213ENST00000550964 USP17L10C9JJH3 530 aa11.95□□□□□ -0.5
PFDN5-213ENST00000550964 EIF5BO60841 1220 aaKnown RBP11.95□□□□□ -0.5
PFDN5-213ENST00000550964 GABPAQ06546 454 aa11.95□□□□□ -0.5
PFDN5-213ENST00000550964 MKRN3Q13064 507 aaKnown RBP11.95□□□□□ -0.5
PFDN5-213ENST00000550964 CTR9Q6PD62 1173 aa11.95□□□□□ -0.5
PFDN5-213ENST00000550964 C16orf86Q6ZW13 317 aa11.95□□□□□ -0.5
PFDN5-213ENST00000550964 ZNF444Q8N0Y2 327 aaPredicted RBP11.95□□□□□ -0.5
PFDN5-213ENST00000550964 MS4A4AQ96JQ5 239 aa11.95□□□□□ -0.5
PFDN5-213ENST00000550964 ZBTB21Q9ULJ3 1066 aa11.95□□□□□ -0.5
PFDN5-213ENST00000550964 ROBO3Q96MS0 1386 aa11.94□□□□□ -0.5
PFDN5-213ENST00000550964 CCDC171Q6TFL3 1326 aa11.94□□□□□ -0.5
PFDN5-213ENST00000550964 A0A0G2JLL6 359 aaPredicted RBP11.94□□□□□ -0.5
PFDN5-213ENST00000550964 MINDY4BA8MYZ0 360 aa11.94□□□□□ -0.5
PFDN5-213ENST00000550964 PRKAB2O43741 272 aa11.94□□□□□ -0.5
PFDN5-213ENST00000550964 OSBPP22059 807 aa11.94□□□□□ -0.5
PFDN5-213ENST00000550964 PLCD1P51178 756 aa11.94□□□□□ -0.5
PFDN5-213ENST00000550964 KIF22Q14807 665 aa11.94□□□□□ -0.5
PFDN5-213ENST00000550964 TAF1CQ15572 869 aaPredicted RBP11.94□□□□□ -0.5
PFDN5-213ENST00000550964 PRRT2Q7Z6L0 340 aaPredicted RBP11.94□□□□□ -0.5
PFDN5-213ENST00000550964 GTF3C2Q8WUA4 911 aaPredicted RBP11.94□□□□□ -0.5
PFDN5-213ENST00000550964 PARK7Q99497 189 aaKnown RBP11.94□□□□□ -0.5
PFDN5-213ENST00000550964 RNF41Q9H4P4 317 aaPredicted RBP11.94□□□□□ -0.5
PFDN5-213ENST00000550964 KANSL2Q9H9L4 492 aa11.94□□□□□ -0.5
PFDN5-213ENST00000550964 ARHGEF10LQ9HCE6 1279 aa11.94□□□□□ -0.5
PFDN5-213ENST00000550964 M0R2C6 588 aa11.93□□□□□ -0.5
PFDN5-213ENST00000550964 MPHOSPH10O00566 681 aaKnown RBP11.93□□□□□ -0.5
PFDN5-213ENST00000550964 FOXN1O15353 648 aa11.93□□□□□ -0.5
PFDN5-213ENST00000550964 CDK8P49336 464 aa11.93□□□□□ -0.5
PFDN5-213ENST00000550964 BACE1P56817 501 aa11.93□□□□□ -0.5
PFDN5-213ENST00000550964 SPP2Q13103 211 aa11.93□□□□□ -0.5
PFDN5-213ENST00000550964 BMP2KLQ5H9B9 411 aa11.93□□□□□ -0.5
PFDN5-213ENST00000550964 SH3D19Q5HYK7 790 aa11.93□□□□□ -0.5
PFDN5-213ENST00000550964 USP17L2Q6R6M4 530 aa11.93□□□□□ -0.5
PFDN5-213ENST00000550964 CWC27Q6UX04 472 aaKnown RBP11.93□□□□□ -0.5
PFDN5-213ENST00000550964 FEZ1Q99689 392 aa11.93□□□□□ -0.5
PFDN5-213ENST00000550964 SYNPO2Q9UMS6 1093 aa11.93□□□□□ -0.5
PFDN5-213ENST00000550964 LOC285556D6RIA3 1793 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 CASP8AP2Q9UKL3 1982 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 TRIM75PA6NK02 468 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 GNRH1P01148 92 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 GH2P01242 217 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 HSPA8P11142 646 aaKnown RBP11.92□□□□□ -0.5
PFDN5-213ENST00000550964 PDE4AP27815 886 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 SHMT1P34896 483 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 GJA5P36382 358 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 NMIQ13287 307 aaPredicted RBP11.92□□□□□ -0.5
PFDN5-213ENST00000550964 RAB3GAP1Q15042 981 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 PKN2Q16513 984 aaKnown RBP11.92□□□□□ -0.5
PFDN5-213ENST00000550964 CCDC178Q5BJE1 867 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 GADL1Q6ZQY3 521 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 KIAA1211Q6ZU35 1233 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 BRI3BPQ8WY22 251 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 ERO1AQ96HE7 468 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 DSCC1Q9BVC3 393 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 DNAJC18Q9H819 358 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 ANAPC4Q9UJX5 808 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 AGTPBP1Q9UPW5 1226 aa11.92□□□□□ -0.5
PFDN5-213ENST00000550964 FAM196BA6NMK8 535 aa11.91□□□□□ -0.5
PFDN5-213ENST00000550964 PDHXO00330 501 aa11.91□□□□□ -0.5
PFDN5-213ENST00000550964 ZNF213O14771 459 aa11.91□□□□□ -0.5
PFDN5-213ENST00000550964 TLR2O60603 784 aa11.91□□□□□ -0.5
PFDN5-213ENST00000550964 FKTNO75072 461 aa11.91□□□□□ -0.5
PFDN5-213ENST00000550964 HSPD1P10809 573 aaKnown RBP11.91□□□□□ -0.5
PFDN5-213ENST00000550964 GCLCP48506 637 aaPredicted RBP11.91□□□□□ -0.5
PFDN5-213ENST00000550964 LBX1P52954 281 aa11.91□□□□□ -0.5
PFDN5-213ENST00000550964 PPARAQ07869 468 aa11.91□□□□□ -0.5
PFDN5-213ENST00000550964 IMMTQ16891 758 aaKnown RBP11.91□□□□□ -0.5
PFDN5-213ENST00000550964 LPAR1Q92633 364 aa11.91□□□□□ -0.5
PFDN5-213ENST00000550964 ZIC5Q96T25 663 aa11.91□□□□□ -0.5
PFDN5-213ENST00000550964 SEC62Q99442 399 aaKnown RBP11.91□□□□□ -0.5
PFDN5-213ENST00000550964 KIAA1683Q9H0B3 1180 aa11.91□□□□□ -0.5
PFDN5-213ENST00000550964 MYH4Q9Y623 1939 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms