RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 CYP7A1P22680 504 aa25.24■■□□□ 1.63
CACNB3-218ENST00000550771 IRX3P78415 501 aaPredicted RBP25.24■■□□□ 1.63
CACNB3-218ENST00000550771 JAG1P78504 1218 aa25.24■■□□□ 1.63
CACNB3-218ENST00000550771 CHRDL2Q6WN34 429 aa25.24■■□□□ 1.63
CACNB3-218ENST00000550771 CCDC8Q9H0W5 538 aaPredicted RBP25.24■■□□□ 1.63
CACNB3-218ENST00000550771 TLR7Q9NYK1 1049 aaKnown RBP25.24■■□□□ 1.63
CACNB3-218ENST00000550771 SIPA1L1O43166 1804 aa25.23■■□□□ 1.63
CACNB3-218ENST00000550771 USP17L10C9JJH3 530 aa25.23■■□□□ 1.63
CACNB3-218ENST00000550771 TMED8Q6PL24 325 aaPredicted RBP25.23■■□□□ 1.63
CACNB3-218ENST00000550771 ZBTB21Q9ULJ3 1066 aa25.23■■□□□ 1.63
CACNB3-218ENST00000550771 CEP290O15078 2479 aa25.22■■□□□ 1.63
CACNB3-218ENST00000550771 IDH1O75874 414 aaKnown RBP25.22■■□□□ 1.63
CACNB3-218ENST00000550771 HMGCRP04035 888 aa25.22■■□□□ 1.63
CACNB3-218ENST00000550771 DYNLL1P63167 89 aaKnown RBP25.22■■□□□ 1.63
CACNB3-218ENST00000550771 CEP85Q6P2H3 762 aa25.22■■□□□ 1.63
CACNB3-218ENST00000550771 DOCK3Q8IZD9 2030 aa25.22■■□□□ 1.63
CACNB3-218ENST00000550771 P2RX7Q99572 595 aaKnown RBP25.21■■□□□ 1.63
CACNB3-218ENST00000550771 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.21■■□□□ 1.63
CACNB3-218ENST00000550771 SAP30BPQ9UHR5 308 aaKnown RBP25.21■■□□□ 1.63
CACNB3-218ENST00000550771 GDF11O95390 407 aa25.2■■□□□ 1.62
CACNB3-218ENST00000550771 HERVK_113P62684 666 aa25.2■■□□□ 1.62
CACNB3-218ENST00000550771 ERC1Q8IUD2 1116 aa25.2■■□□□ 1.62
CACNB3-218ENST00000550771 RBM27Q9P2N5 1060 aaKnown RBP25.2■■□□□ 1.62
CACNB3-218ENST00000550771 SHROOM1Q2M3G4 852 aaPredicted RBP25.19■■□□□ 1.62
CACNB3-218ENST00000550771 MAGEB6Q8N7X4 407 aa25.19■■□□□ 1.62
CACNB3-218ENST00000550771 MIGA1Q8NAN2 632 aa25.19■■□□□ 1.62
CACNB3-218ENST00000550771 GPRC5AQ8NFJ5 357 aa25.19■■□□□ 1.62
CACNB3-218ENST00000550771 GTF3C2Q8WUA4 911 aaPredicted RBP25.19■■□□□ 1.62
CACNB3-218ENST00000550771 PRO3102Q9H379 93 aa25.19■■□□□ 1.62
CACNB3-218ENST00000550771 FOCADQ5VW36 1801 aa25.19■■□□□ 1.62
CACNB3-218ENST00000550771 RPTORQ8N122 1335 aa25.18■■□□□ 1.62
CACNB3-218ENST00000550771 MAP3K12Q12852 859 aa25.18■■□□□ 1.62
CACNB3-218ENST00000550771 ANKLE1Q8NAG6 615 aa25.18■■□□□ 1.62
CACNB3-218ENST00000550771 EHD4Q9H223 541 aa25.18■■□□□ 1.62
CACNB3-218ENST00000550771 TXNRD2Q9NNW7 524 aa25.18■■□□□ 1.62
CACNB3-218ENST00000550771 TRIOBPQ9H2D6 2365 aa25.17■■□□□ 1.62
CACNB3-218ENST00000550771 EVI5O60447 810 aa25.17■■□□□ 1.62
CACNB3-218ENST00000550771 USP5P45974 858 aa25.17■■□□□ 1.62
CACNB3-218ENST00000550771 TATDN1Q6P1N9 297 aa25.17■■□□□ 1.62
CACNB3-218ENST00000550771 USP17L2Q6R6M4 530 aa25.17■■□□□ 1.62
CACNB3-218ENST00000550771 SOCS4Q8WXH5 440 aa25.17■■□□□ 1.62
CACNB3-218ENST00000550771 HMX1Q9NP08 348 aaPredicted RBP25.17■■□□□ 1.62
CACNB3-218ENST00000550771 EMILIN3Q9NT22 766 aa25.17■■□□□ 1.62
CACNB3-218ENST00000550771 CDK5RAP2Q96SN8 1893 aa25.17■■□□□ 1.62
CACNB3-218ENST00000550771 GH2P01242 217 aa25.16■■□□□ 1.62
CACNB3-218ENST00000550771 XRCC5P13010 732 aaKnown RBP25.16■■□□□ 1.62
CACNB3-218ENST00000550771 NECAB2Q7Z6G3 386 aa25.16■■□□□ 1.62
CACNB3-218ENST00000550771 AACSQ86V21 672 aa25.16■■□□□ 1.62
CACNB3-218ENST00000550771 PAWRQ96IZ0 340 aaKnown RBP25.16■■□□□ 1.62
CACNB3-218ENST00000550771 NUDT12Q9BQG2 462 aa25.16■■□□□ 1.62
CACNB3-218ENST00000550771 ANTXR1Q9H6X2 564 aa25.16■■□□□ 1.62
CACNB3-218ENST00000550771 RBPJLQ9UBG7 517 aa25.16■■□□□ 1.62
CACNB3-218ENST00000550771 SERPINB13Q9UIV8 391 aa25.16■■□□□ 1.62
CACNB3-218ENST00000550771 EXOC6BQ9Y2D4 811 aa25.16■■□□□ 1.62
CACNB3-218ENST00000550771 MAPK4P31152 587 aa25.15■■□□□ 1.62
CACNB3-218ENST00000550771 HSP90AB4PQ58FF6 505 aa25.15■■□□□ 1.62
CACNB3-218ENST00000550771 TTC6Q86TZ1 520 aa25.15■■□□□ 1.62
CACNB3-218ENST00000550771 TRIB2Q92519 343 aa25.15■■□□□ 1.62
CACNB3-218ENST00000550771 C12orf42Q96LP6 360 aa25.15■■□□□ 1.62
CACNB3-218ENST00000550771 NDUFB9Q9Y6M9 179 aa25.15■■□□□ 1.62
CACNB3-218ENST00000550771 MYO5AQ9Y4I1 1855 aaKnown RBP25.15■■□□□ 1.62
CACNB3-218ENST00000550771 CYP2B6P20813 491 aa25.14■■□□□ 1.62
CACNB3-218ENST00000550771 ERVK-9P63128 1117 aa25.14■■□□□ 1.62
CACNB3-218ENST00000550771 ERVK-24P63145 666 aa25.14■■□□□ 1.62
CACNB3-218ENST00000550771 TRIM32Q13049 653 aa25.14■■□□□ 1.62
CACNB3-218ENST00000550771 MAP3K21Q5TCX8 1036 aa25.14■■□□□ 1.62
CACNB3-218ENST00000550771 MIER1Q8N108 512 aa25.14■■□□□ 1.62
CACNB3-218ENST00000550771 TRMT44Q8IYL2 757 aaKnown RBP25.13■■□□□ 1.61
CACNB3-218ENST00000550771 PANK1Q8TE04 598 aa25.13■■□□□ 1.61
CACNB3-218ENST00000550771 ZBED9Q6R2W3 1325 aa25.12■■□□□ 1.61
CACNB3-218ENST00000550771 PEX10O60683 326 aa25.12■■□□□ 1.61
CACNB3-218ENST00000550771 PDE3AQ14432 1141 aa25.12■■□□□ 1.61
CACNB3-218ENST00000550771 TTF1Q15361 905 aaPredicted RBP25.12■■□□□ 1.61
CACNB3-218ENST00000550771 Q3C1V9 767 aa25.12■■□□□ 1.61
CACNB3-218ENST00000550771 DIS3LQ8TF46 1054 aaKnown RBP25.12■■□□□ 1.61
CACNB3-218ENST00000550771 RIOK1Q9BRS2 568 aaKnown RBP25.12■■□□□ 1.61
CACNB3-218ENST00000550771 A0A1W2PPC1 479 aa25.11■■□□□ 1.61
CACNB3-218ENST00000550771 USP14P54578 494 aa25.11■■□□□ 1.61
CACNB3-218ENST00000550771 CERKLQ49MI3 558 aaPredicted RBP25.11■■□□□ 1.61
CACNB3-218ENST00000550771 CCAR1Q8IX12 1150 aaKnown RBP25.11■■□□□ 1.61
CACNB3-218ENST00000550771 RHPN1Q8TCX5 695 aa25.11■■□□□ 1.61
CACNB3-218ENST00000550771 USP6NLQ92738 828 aa25.11■■□□□ 1.61
CACNB3-218ENST00000550771 FEZ1Q99689 392 aa25.11■■□□□ 1.61
CACNB3-218ENST00000550771 USP17L15C9J2P7 530 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 USP17L13C9JLJ4 530 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 USP17L11C9JVI0 530 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 USP17L18D6R9N7 530 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 USP17L22D6RA61 530 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 USP17L17D6RBQ6 530 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 USP17L19D6RCP7 530 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 USP17L20D6RJB6 530 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 MS4A1P11836 297 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 USP17L24Q0WX57 530 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 ABCB5Q2M3G0 1257 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 POTEEQ6S8J3 1075 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 GPR142Q7Z601 462 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 PAGR1Q9BTK6 254 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 NBPF3Q9H094 633 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 KIAA1683Q9H0B3 1180 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 PORCNQ9H237 461 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms