RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SPATA31A3Q5VYP0 1347 aa7.79□□□□□ -1.16
SCAF11-213ENST00000550629 TTC21BQ7Z4L5 1316 aa7.79□□□□□ -1.16
SCAF11-213ENST00000550629 TNS3Q68CZ2 1445 aa7.79□□□□□ -1.16
SCAF11-213ENST00000550629 NSD3Q9BZ95 1437 aa7.79□□□□□ -1.16
SCAF11-213ENST00000550629 FAM177BA6PVY3 158 aa7.79□□□□□ -1.16
SCAF11-213ENST00000550629 ALX3O95076 343 aa7.79□□□□□ -1.16
SCAF11-213ENST00000550629 FSTP19883 344 aa7.79□□□□□ -1.16
SCAF11-213ENST00000550629 CD68P34810 354 aaPredicted RBP7.79□□□□□ -1.16
SCAF11-213ENST00000550629 DDX10Q13206 875 aaKnown RBP7.79□□□□□ -1.16
SCAF11-213ENST00000550629 FAM117BQ6P1L5 589 aa7.79□□□□□ -1.16
SCAF11-213ENST00000550629 TMEM130Q8N3G9 435 aa7.79□□□□□ -1.16
SCAF11-213ENST00000550629 LRRC59Q96AG4 307 aaKnown RBP7.79□□□□□ -1.16
SCAF11-213ENST00000550629 CITED4Q96RK1 184 aa7.79□□□□□ -1.16
SCAF11-213ENST00000550629 USP31Q70CQ4 1352 aa7.79□□□□□ -1.16
SCAF11-213ENST00000550629 COL16A1Q07092 1604 aaPredicted RBP7.78□□□□□ -1.16
SCAF11-213ENST00000550629 F8W735 103 aaPredicted RBP7.78□□□□□ -1.16
SCAF11-213ENST00000550629 H3BRJ5 948 aa7.78□□□□□ -1.16
SCAF11-213ENST00000550629 CABP4P57796 275 aa7.78□□□□□ -1.16
SCAF11-213ENST00000550629 PDE3BQ13370 1112 aa7.78□□□□□ -1.16
SCAF11-213ENST00000550629 USPL1Q5W0Q7 1092 aa7.78□□□□□ -1.16
SCAF11-213ENST00000550629 DZIP1LQ8IYY4 767 aaKnown RBP7.78□□□□□ -1.16
SCAF11-213ENST00000550629 KLHL23Q8NBE8 558 aa7.78□□□□□ -1.16
SCAF11-213ENST00000550629 KLHDC7BQ96G42 594 aa7.78□□□□□ -1.16
SCAF11-213ENST00000550629 SOX13Q9UN79 622 aa7.78□□□□□ -1.16
SCAF11-213ENST00000550629 MED1Q15648 1581 aaPredicted RBP7.78□□□□□ -1.16
SCAF11-213ENST00000550629 USP54Q70EL1 1684 aa7.78□□□□□ -1.16
SCAF11-213ENST00000550629 ALS2Q96Q42 1657 aa7.78□□□□□ -1.16
SCAF11-213ENST00000550629 PHLPP1O60346 1717 aa7.78□□□□□ -1.16
SCAF11-213ENST00000550629 FYB1O15117 783 aa7.77□□□□□ -1.17
SCAF11-213ENST00000550629 DDX3YO15523 660 aaKnown RBP7.77□□□□□ -1.17
SCAF11-213ENST00000550629 WISP1O95388 367 aa7.77□□□□□ -1.17
SCAF11-213ENST00000550629 IGHA2P01877 340 aa7.77□□□□□ -1.17
SCAF11-213ENST00000550629 GLB1P16278 677 aa7.77□□□□□ -1.17
SCAF11-213ENST00000550629 ORC1Q13415 861 aa7.77□□□□□ -1.17
SCAF11-213ENST00000550629 GALNT12Q8IXK2 581 aa7.77□□□□□ -1.17
SCAF11-213ENST00000550629 AGGF1Q8N302 714 aaeCLIP7.77□□□□□ -1.17
SCAF11-213ENST00000550629 BSNDQ8WZ55 320 aa7.77□□□□□ -1.17
SCAF11-213ENST00000550629 SEC31BQ9NQW1 1179 aa7.77□□□□□ -1.17
SCAF11-213ENST00000550629 COL22A1Q8NFW1 1626 aaPredicted RBP7.77□□□□□ -1.17
SCAF11-213ENST00000550629 OVOS2A0A0J9YW53 1432 aa7.77□□□□□ -1.17
SCAF11-213ENST00000550629 OVOS2Q6IE36 1432 aa7.77□□□□□ -1.17
SCAF11-213ENST00000550629 USP19O94966 1318 aa7.77□□□□□ -1.17
SCAF11-213ENST00000550629 PIK3C2AO00443 1686 aa7.76□□□□□ -1.17
SCAF11-213ENST00000550629 GPR182O15218 404 aa7.76□□□□□ -1.17
SCAF11-213ENST00000550629 NEFLP07196 543 aa7.76□□□□□ -1.17
SCAF11-213ENST00000550629 XPCQ01831 940 aaPredicted RBP7.76□□□□□ -1.17
SCAF11-213ENST00000550629 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.76□□□□□ -1.17
SCAF11-213ENST00000550629 SLC51AQ86UW1 340 aa7.76□□□□□ -1.17
SCAF11-213ENST00000550629 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.76□□□□□ -1.17
SCAF11-213ENST00000550629 ASAP3Q8TDY4 903 aa7.76□□□□□ -1.17
SCAF11-213ENST00000550629 DDX17Q92841 729 aaKnown RBP7.76□□□□□ -1.17
SCAF11-213ENST00000550629 BHLHE41Q9C0J9 482 aaPredicted RBP7.76□□□□□ -1.17
SCAF11-213ENST00000550629 PNPLA6Q8IY17 1366 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 JCADQ9P266 1359 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 SLIT3O75094 1523 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 A0A1W2PP55 124 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 ADAM11O75078 769 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 SSTR4P31391 388 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 HGSNATQ68CP4 663 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 MCTP1Q6DN14 999 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 VN1R5Q7Z5H4 357 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 NME9Q86XW9 330 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 KCNH5Q8NCM2 988 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 FOXD4L4Q8WXT5 416 aaPredicted RBP7.75□□□□□ -1.17
SCAF11-213ENST00000550629 SLC7A3Q8WY07 619 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 WNT8BQ93098 351 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 COG3Q96JB2 828 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 NIF3L1Q9GZT8 377 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 OSGEPQ9NPF4 335 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 BIN2Q9UBW5 565 aaPredicted RBP7.75□□□□□ -1.17
SCAF11-213ENST00000550629 SHPRHQ149N8 1683 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 KIF20BQ96Q89 1820 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 SPATA31A6Q5VVP1 1343 aa7.75□□□□□ -1.17
SCAF11-213ENST00000550629 AATKQ6ZMQ8 1374 aa7.74□□□□□ -1.17
SCAF11-213ENST00000550629 PARD3Q8TEW0 1356 aa7.74□□□□□ -1.17
SCAF11-213ENST00000550629 METTL12A8MUP2 240 aa7.74□□□□□ -1.17
SCAF11-213ENST00000550629 CPNE3O75131 537 aaKnown RBP7.74□□□□□ -1.17
SCAF11-213ENST00000550629 HSPA1LP34931 641 aa7.74□□□□□ -1.17
SCAF11-213ENST00000550629 RALBP1Q15311 655 aa7.74□□□□□ -1.17
SCAF11-213ENST00000550629 ACAD11Q709F0 780 aa7.74□□□□□ -1.17
SCAF11-213ENST00000550629 UBASH3BQ8TF42 649 aa7.74□□□□□ -1.17
SCAF11-213ENST00000550629 RBCK1Q9BYM8 510 aa7.74□□□□□ -1.17
SCAF11-213ENST00000550629 ANKRD26Q9UPS8 1709 aa7.74□□□□□ -1.17
SCAF11-213ENST00000550629 CPDO75976 1380 aa7.73□□□□□ -1.17
SCAF11-213ENST00000550629 KIF24Q5T7B8 1368 aa7.73□□□□□ -1.17
SCAF11-213ENST00000550629 SOX1O00570 391 aaPredicted RBP7.73□□□□□ -1.17
SCAF11-213ENST00000550629 GSC2O15499 205 aa7.73□□□□□ -1.17
SCAF11-213ENST00000550629 DUOXA2Q1HG44 320 aa7.73□□□□□ -1.17
SCAF11-213ENST00000550629 Q6ZS46 218 aa7.73□□□□□ -1.17
SCAF11-213ENST00000550629 KIAA1211Q6ZU35 1233 aa7.73□□□□□ -1.17
SCAF11-213ENST00000550629 MORC1Q86VD1 984 aa7.73□□□□□ -1.17
SCAF11-213ENST00000550629 IVNS1ABPQ9Y6Y0 642 aa7.73□□□□□ -1.17
SCAF11-213ENST00000550629 NFAT5O94916 1531 aa7.73□□□□□ -1.17
SCAF11-213ENST00000550629 ABCC6O95255 1503 aa7.73□□□□□ -1.17
SCAF11-213ENST00000550629 MARF1Q9Y4F3 1742 aaKnown RBP7.72□□□□□ -1.17
SCAF11-213ENST00000550629 CRYBG1Q9Y4K1 1723 aa7.72□□□□□ -1.17
SCAF11-213ENST00000550629 GCP02774 474 aa7.72□□□□□ -1.17
SCAF11-213ENST00000550629 ARL4DP49703 201 aa7.72□□□□□ -1.17
SCAF11-213ENST00000550629 NLRP12P59046 1061 aa7.72□□□□□ -1.17
SCAF11-213ENST00000550629 C19orf57Q0VDD7 668 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms