RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 PDRG1Q9NUG6 133 aa16.67■□□□□ 0.26
CACNB3-216ENST00000550391 B4E1Z4 1266 aa16.66■□□□□ 0.26
CACNB3-216ENST00000550391 AOC2O75106 756 aa16.66■□□□□ 0.26
CACNB3-216ENST00000550391 MCM5P33992 734 aa16.66■□□□□ 0.26
CACNB3-216ENST00000550391 TNNI2P48788 182 aa16.66■□□□□ 0.26
CACNB3-216ENST00000550391 NT5C2P49902 561 aa16.66■□□□□ 0.26
CACNB3-216ENST00000550391 EXOSC10Q01780 885 aaKnown RBP16.66■□□□□ 0.26
CACNB3-216ENST00000550391 TNFAIP1Q13829 316 aa16.66■□□□□ 0.26
CACNB3-216ENST00000550391 ZSCAN29Q8IWY8 852 aaPredicted RBP16.66■□□□□ 0.26
CACNB3-216ENST00000550391 ZNF287Q9HBT7 754 aa16.66■□□□□ 0.26
CACNB3-216ENST00000550391 PI4KBQ9UBF8 816 aa16.66■□□□□ 0.26
CACNB3-216ENST00000550391 PGAP2Q9UHJ9 254 aa16.66■□□□□ 0.26
CACNB3-216ENST00000550391 TAOK2Q9UL54 1235 aa16.66■□□□□ 0.26
CACNB3-216ENST00000550391 CDK8P49336 464 aa16.65■□□□□ 0.26
CACNB3-216ENST00000550391 MCM2P49736 904 aa16.65■□□□□ 0.26
CACNB3-216ENST00000550391 BECN1Q14457 450 aa16.65■□□□□ 0.26
CACNB3-216ENST00000550391 RRP12Q5JTH9 1297 aaKnown RBP16.65■□□□□ 0.26
CACNB3-216ENST00000550391 HABP4Q5JVS0 413 aaKnown RBP16.65■□□□□ 0.26
CACNB3-216ENST00000550391 ANGEL2Q5VTE6 544 aaKnown RBP16.65■□□□□ 0.26
CACNB3-216ENST00000550391 USP50Q70EL3 339 aaPredicted RBP16.65■□□□□ 0.26
CACNB3-216ENST00000550391 CYB5R4Q7L1T6 521 aa16.65■□□□□ 0.26
CACNB3-216ENST00000550391 METTL16Q86W50 562 aaKnown RBP16.65■□□□□ 0.26
CACNB3-216ENST00000550391 ESR2Q92731 530 aa16.65■□□□□ 0.26
CACNB3-216ENST00000550391 HHIPL1Q96JK4 782 aa16.65■□□□□ 0.26
CACNB3-216ENST00000550391 ALDH8A1Q9H2A2 487 aaPredicted RBP16.65■□□□□ 0.26
CACNB3-216ENST00000550391 TOMM22Q9NS69 142 aa16.65■□□□□ 0.26
CACNB3-216ENST00000550391 SERPINB13Q9UIV8 391 aa16.65■□□□□ 0.26
CACNB3-216ENST00000550391 WDR19Q8NEZ3 1342 aa16.65■□□□□ 0.26
CACNB3-216ENST00000550391 PITPNM2Q9BZ72 1349 aa16.65■□□□□ 0.26
CACNB3-216ENST00000550391 KDM4AO75164 1064 aa16.64■□□□□ 0.25
CACNB3-216ENST00000550391 PRDM1O75626 825 aa16.64■□□□□ 0.25
CACNB3-216ENST00000550391 CD2BP2O95400 341 aaKnown RBP16.64■□□□□ 0.25
CACNB3-216ENST00000550391 ANTXR2P58335 489 aa16.64■□□□□ 0.25
CACNB3-216ENST00000550391 RASA3Q14644 834 aa16.64■□□□□ 0.25
CACNB3-216ENST00000550391 APOBEC3FQ8IUX4 373 aaKnown RBP16.64■□□□□ 0.25
CACNB3-216ENST00000550391 FOXP4Q8IVH2 680 aaPredicted RBP16.64■□□□□ 0.25
CACNB3-216ENST00000550391 SLC44A5Q8NCS7 719 aa16.64■□□□□ 0.25
CACNB3-216ENST00000550391 TMEM39BQ9GZU3 492 aa16.64■□□□□ 0.25
CACNB3-216ENST00000550391 MKNK2Q9HBH9 465 aa16.64■□□□□ 0.25
CACNB3-216ENST00000550391 GGA3Q9NZ52 723 aa16.64■□□□□ 0.25
CACNB3-216ENST00000550391 ZSWIM5Q9P217 1185 aa16.64■□□□□ 0.25
CACNB3-216ENST00000550391 SWAP70Q9UH65 585 aa16.64■□□□□ 0.25
CACNB3-216ENST00000550391 PRC1O43663 620 aa16.63■□□□□ 0.25
CACNB3-216ENST00000550391 RASA1P20936 1047 aa16.63■□□□□ 0.25
CACNB3-216ENST00000550391 ANKRD1Q15327 319 aa16.63■□□□□ 0.25
CACNB3-216ENST00000550391 CHST3Q7LGC8 479 aa16.63■□□□□ 0.25
CACNB3-216ENST00000550391 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
CACNB3-216ENST00000550391 FBXL16Q8N461 479 aa16.63■□□□□ 0.25
CACNB3-216ENST00000550391 TCEANC2Q96MN5 208 aa16.63■□□□□ 0.25
CACNB3-216ENST00000550391 TEPSINQ96N21 525 aa16.63■□□□□ 0.25
CACNB3-216ENST00000550391 CSRNP1Q96S65 589 aa16.63■□□□□ 0.25
CACNB3-216ENST00000550391 DNAJC18Q9H819 358 aa16.63■□□□□ 0.25
CACNB3-216ENST00000550391 SCAF8Q9UPN6 1271 aaKnown RBP16.63■□□□□ 0.25
CACNB3-216ENST00000550391 MYH8P13535 1937 aa16.62■□□□□ 0.25
CACNB3-216ENST00000550391 RANBP6O60518 1105 aaKnown RBP16.62■□□□□ 0.25
CACNB3-216ENST00000550391 AK2P54819 239 aa16.62■□□□□ 0.25
CACNB3-216ENST00000550391 FGD1P98174 961 aa16.62■□□□□ 0.25
CACNB3-216ENST00000550391 CST9Q5W186 159 aa16.62■□□□□ 0.25
CACNB3-216ENST00000550391 Q6ZUG5 572 aa16.62■□□□□ 0.25
CACNB3-216ENST00000550391 ZNF444Q8N0Y2 327 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-216ENST00000550391 CRACR2BQ8N4Y2 399 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-216ENST00000550391 MTA3Q9BTC8 594 aa16.62■□□□□ 0.25
CACNB3-216ENST00000550391 TRIM34Q9BYJ4 488 aa16.62■□□□□ 0.25
CACNB3-216ENST00000550391 AGXT2Q9BYV1 514 aa16.62■□□□□ 0.25
CACNB3-216ENST00000550391 DEFB129Q9H1M3 183 aa16.62■□□□□ 0.25
CACNB3-216ENST00000550391 TRPM7Q96QT4 1865 aa16.62■□□□□ 0.25
CACNB3-216ENST00000550391 SLURP2P0DP57 97 aa16.61■□□□□ 0.25
CACNB3-216ENST00000550391 SHMT1P34896 483 aa16.61■□□□□ 0.25
CACNB3-216ENST00000550391 TOB2Q14106 344 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-216ENST00000550391 CDAN1Q8IWY9 1227 aa16.61■□□□□ 0.25
CACNB3-216ENST00000550391 ZC3H15Q8WU90 426 aaKnown RBP16.61■□□□□ 0.25
CACNB3-216ENST00000550391 TMEM87BQ96K49 555 aa16.61■□□□□ 0.25
CACNB3-216ENST00000550391 LRRC2Q9BYS8 371 aa16.61■□□□□ 0.25
CACNB3-216ENST00000550391 TBC1D2Q9BYX2 928 aa16.61■□□□□ 0.25
CACNB3-216ENST00000550391 HERC5Q9UII4 1024 aaKnown RBP16.61■□□□□ 0.25
CACNB3-216ENST00000550391 PPP2R3BQ9Y5P8 575 aa16.61■□□□□ 0.25
CACNB3-216ENST00000550391 TSPY2A6NKD2 308 aa16.6■□□□□ 0.25
CACNB3-216ENST00000550391 TBC1D12O60347 775 aa16.6■□□□□ 0.25
CACNB3-216ENST00000550391 MAP3K10Q02779 954 aa16.6■□□□□ 0.25
CACNB3-216ENST00000550391 SART3Q15020 963 aaKnown RBP16.6■□□□□ 0.25
CACNB3-216ENST00000550391 FAM47AQ5JRC9 791 aa16.6■□□□□ 0.25
CACNB3-216ENST00000550391 TATDN1Q6P1N9 297 aa16.6■□□□□ 0.25
CACNB3-216ENST00000550391 SAPCD2Q86UD0 394 aa16.6■□□□□ 0.25
CACNB3-216ENST00000550391 IGDCC4Q8TDY8 1250 aa16.6■□□□□ 0.25
CACNB3-216ENST00000550391 DCPSQ96C86 337 aaKnown RBP16.6■□□□□ 0.25
CACNB3-216ENST00000550391 IPO9Q96P70 1041 aaKnown RBP16.6■□□□□ 0.25
CACNB3-216ENST00000550391 LIMCH1Q9UPQ0 1083 aa16.6■□□□□ 0.25
CACNB3-216ENST00000550391 POLR2AP24928 1970 aaKnown RBP16.6■□□□□ 0.25
CACNB3-216ENST00000550391 FAM196BA6NMK8 535 aa16.59■□□□□ 0.25
CACNB3-216ENST00000550391 K7ELQ4 463 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-216ENST00000550391 SH2B2O14492 632 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-216ENST00000550391 TFAP4Q01664 338 aa16.59■□□□□ 0.25
CACNB3-216ENST00000550391 IQCA1Q86XH1 822 aa16.59■□□□□ 0.25
CACNB3-216ENST00000550391 UBAC1Q9BSL1 405 aa16.59■□□□□ 0.25
CACNB3-216ENST00000550391 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.59■□□□□ 0.25
CACNB3-216ENST00000550391 TCP11L1Q9NUJ3 509 aa16.59■□□□□ 0.25
CACNB3-216ENST00000550391 GREB1LQ9C091 1923 aaPredicted RBP16.58■□□□□ 0.25
CACNB3-216ENST00000550391 ERICH2A1L162 156 aa16.58■□□□□ 0.24
CACNB3-216ENST00000550391 IFIT3O14879 490 aaKnown RBP16.58■□□□□ 0.24
CACNB3-216ENST00000550391 TSPY3P0CV98 308 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms