RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 CCDC171Q6TFL3 1326 aa23.13■■□□□ 1.29
DDX54-207ENST00000550016 TESPA1A2RU30 521 aaPredicted RBP23.13■■□□□ 1.29
DDX54-207ENST00000550016 MINDY4BA8MYZ0 360 aa23.13■■□□□ 1.29
DDX54-207ENST00000550016 ASNSP08243 561 aa23.13■■□□□ 1.29
DDX54-207ENST00000550016 SNAPC2Q13487 334 aa23.13■■□□□ 1.29
DDX54-207ENST00000550016 ZNF589Q86UQ0 364 aaPredicted RBP23.13■■□□□ 1.29
DDX54-207ENST00000550016 DYNLL2Q96FJ2 89 aa23.13■■□□□ 1.29
DDX54-207ENST00000550016 NAPBQ9H115 298 aa23.13■■□□□ 1.29
DDX54-207ENST00000550016 USP17L5A8MUK1 530 aa23.12■■□□□ 1.29
DDX54-207ENST00000550016 SMIM22K7EJ46 135 aa23.12■■□□□ 1.29
DDX54-207ENST00000550016 CXCL11O14625 94 aa23.12■■□□□ 1.29
DDX54-207ENST00000550016 FOXP2O15409 715 aa23.12■■□□□ 1.29
DDX54-207ENST00000550016 CA12O43570 354 aa23.12■■□□□ 1.29
DDX54-207ENST00000550016 GDF11O95390 407 aa23.12■■□□□ 1.29
DDX54-207ENST00000550016 JAG1P78504 1218 aa23.12■■□□□ 1.29
DDX54-207ENST00000550016 ALX1Q15699 326 aa23.12■■□□□ 1.29
DDX54-207ENST00000550016 VPS53Q5VIR6 699 aa23.12■■□□□ 1.29
DDX54-207ENST00000550016 C16orf86Q6ZW13 317 aa23.12■■□□□ 1.29
DDX54-207ENST00000550016 TBC1D2Q9BYX2 928 aa23.12■■□□□ 1.29
DDX54-207ENST00000550016 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.12■■□□□ 1.29
DDX54-207ENST00000550016 KCNH4Q9UQ05 1017 aa23.12■■□□□ 1.29
DDX54-207ENST00000550016 AFG3L2Q9Y4W6 797 aa23.12■■□□□ 1.29
DDX54-207ENST00000550016 CETPP11597 493 aa23.11■■□□□ 1.29
DDX54-207ENST00000550016 CHMLP26374 656 aa23.11■■□□□ 1.29
DDX54-207ENST00000550016 CDK8P49336 464 aa23.11■■□□□ 1.29
DDX54-207ENST00000550016 SLC44A5Q8NCS7 719 aa23.11■■□□□ 1.29
DDX54-207ENST00000550016 ZBTB21Q9ULJ3 1066 aa23.11■■□□□ 1.29
DDX54-207ENST00000550016 CCL15-CCL14A0A0B4J2E2 113 aa23.1■■□□□ 1.29
DDX54-207ENST00000550016 HSPD1P10809 573 aaKnown RBP23.1■■□□□ 1.29
DDX54-207ENST00000550016 CCL15Q16663 113 aa23.1■■□□□ 1.29
DDX54-207ENST00000550016 ABCB5Q2M3G0 1257 aa23.1■■□□□ 1.29
DDX54-207ENST00000550016 BMP2KLQ5H9B9 411 aa23.1■■□□□ 1.29
DDX54-207ENST00000550016 IFNL1Q8IU54 200 aa23.1■■□□□ 1.29
DDX54-207ENST00000550016 RUFY2Q8WXA3 655 aa23.1■■□□□ 1.29
DDX54-207ENST00000550016 CABP5Q9NP86 173 aa23.1■■□□□ 1.29
DDX54-207ENST00000550016 RNF186Q9NXI6 227 aa23.1■■□□□ 1.29
DDX54-207ENST00000550016 FOXN1O15353 648 aa23.09■■□□□ 1.29
DDX54-207ENST00000550016 GH2P01242 217 aa23.09■■□□□ 1.29
DDX54-207ENST00000550016 SHROOM1Q2M3G4 852 aaPredicted RBP23.09■■□□□ 1.29
DDX54-207ENST00000550016 OTUD7BQ6GQQ9 843 aa23.09■■□□□ 1.29
DDX54-207ENST00000550016 CCDC84Q86UT8 332 aaPredicted RBP23.09■■□□□ 1.29
DDX54-207ENST00000550016 BRI3BPQ8WY22 251 aa23.09■■□□□ 1.29
DDX54-207ENST00000550016 PTPN18Q99952 460 aa23.09■■□□□ 1.29
DDX54-207ENST00000550016 AS3MTQ9HBK9 375 aa23.09■■□□□ 1.29
DDX54-207ENST00000550016 SAGE1Q9NXZ1 904 aa23.09■■□□□ 1.29
DDX54-207ENST00000550016 ROBO3Q96MS0 1386 aa23.09■■□□□ 1.29
DDX54-207ENST00000550016 TRPA1O75762 1119 aa23.08■■□□□ 1.29
DDX54-207ENST00000550016 ALDH1A1P00352 501 aa23.08■■□□□ 1.29
DDX54-207ENST00000550016 ZNF280CQ8ND82 737 aa23.08■■□□□ 1.29
DDX54-207ENST00000550016 CCDC17Q96LX7 622 aa23.08■■□□□ 1.29
DDX54-207ENST00000550016 WDR18Q9BV38 432 aa23.08■■□□□ 1.29
DDX54-207ENST00000550016 IGF2BP3O00425 579 aaKnown RBP eCLIP23.07■■□□□ 1.28
DDX54-207ENST00000550016 FGAP02671 866 aa23.07■■□□□ 1.28
DDX54-207ENST00000550016 PPARAQ07869 468 aa23.07■■□□□ 1.28
DDX54-207ENST00000550016 SPP2Q13103 211 aa23.07■■□□□ 1.28
DDX54-207ENST00000550016 ZMYM6O95789 1325 aa23.07■■□□□ 1.28
DDX54-207ENST00000550016 RAD50Q92878 1312 aa23.07■■□□□ 1.28
DDX54-207ENST00000550016 A0A0G2JLL6 359 aaPredicted RBP23.06■■□□□ 1.28
DDX54-207ENST00000550016 TRIM75PA6NK02 468 aa23.06■■□□□ 1.28
DDX54-207ENST00000550016 SLC3A2P08195 630 aaKnown RBP23.06■■□□□ 1.28
DDX54-207ENST00000550016 CTCFP49711 727 aaPredicted RBP23.06■■□□□ 1.28
DDX54-207ENST00000550016 PRRT2Q7Z6L0 340 aaPredicted RBP23.06■■□□□ 1.28
DDX54-207ENST00000550016 STK11IPQ8N1F8 1099 aa23.06■■□□□ 1.28
DDX54-207ENST00000550016 MKNK2Q9HBH9 465 aa23.06■■□□□ 1.28
DDX54-207ENST00000550016 ZNF287Q9HBT7 754 aa23.06■■□□□ 1.28
DDX54-207ENST00000550016 LAMA4Q16363 1823 aa23.05■■□□□ 1.28
DDX54-207ENST00000550016 MPHOSPH10O00566 681 aaKnown RBP23.05■■□□□ 1.28
DDX54-207ENST00000550016 RAB3GAP1Q15042 981 aa23.05■■□□□ 1.28
DDX54-207ENST00000550016 FASTKD5Q7L8L6 764 aaKnown RBP23.05■■□□□ 1.28
DDX54-207ENST00000550016 ANAPC4Q9UJX5 808 aa23.05■■□□□ 1.28
DDX54-207ENST00000550016 LOC285556D6RIA3 1793 aa23.04■■□□□ 1.28
DDX54-207ENST00000550016 AKR1B1P15121 316 aa23.04■■□□□ 1.28
DDX54-207ENST00000550016 GUCY1A2P33402 732 aa23.04■■□□□ 1.28
DDX54-207ENST00000550016 PDE4BQ07343 736 aa23.04■■□□□ 1.28
DDX54-207ENST00000550016 MOGSQ13724 837 aa23.04■■□□□ 1.28
DDX54-207ENST00000550016 TMEM179Q6ZVK1 233 aa23.04■■□□□ 1.28
DDX54-207ENST00000550016 DSCC1Q9BVC3 393 aa23.04■■□□□ 1.28
DDX54-207ENST00000550016 IL25Q9H293 177 aa23.04■■□□□ 1.28
DDX54-207ENST00000550016 ZCCHC17Q9NP64 241 aaKnown RBP23.04■■□□□ 1.28
DDX54-207ENST00000550016 GREB1LQ9C091 1923 aaPredicted RBP23.04■■□□□ 1.28
DDX54-207ENST00000550016 CASP8AP2Q9UKL3 1982 aa23.03■■□□□ 1.28
DDX54-207ENST00000550016 BTBD19C9JJ37 291 aa23.03■■□□□ 1.28
DDX54-207ENST00000550016 HSPA8P11142 646 aaKnown RBP23.03■■□□□ 1.28
DDX54-207ENST00000550016 RASA1P20936 1047 aa23.03■■□□□ 1.28
DDX54-207ENST00000550016 SEPT2Q15019 361 aa23.03■■□□□ 1.28
DDX54-207ENST00000550016 FAM43AQ8N2R8 423 aa23.03■■□□□ 1.28
DDX54-207ENST00000550016 CFHR5Q9BXR6 569 aa23.03■■□□□ 1.28
DDX54-207ENST00000550016 TSKSQ9UJT2 592 aa23.03■■□□□ 1.28
DDX54-207ENST00000550016 C19orf81C9J6K1 198 aa23.02■■□□□ 1.28
DDX54-207ENST00000550016 USP17L10C9JJH3 530 aa23.02■■□□□ 1.28
DDX54-207ENST00000550016 SGSM2O43147 1006 aa23.02■■□□□ 1.28
DDX54-207ENST00000550016 BACE1P56817 501 aa23.02■■□□□ 1.28
DDX54-207ENST00000550016 CTDSPL2Q05D32 466 aa23.02■■□□□ 1.28
DDX54-207ENST00000550016 SH3D19Q5HYK7 790 aa23.02■■□□□ 1.28
DDX54-207ENST00000550016 GADL1Q6ZQY3 521 aa23.02■■□□□ 1.28
DDX54-207ENST00000550016 ANKRD23Q86SG2 305 aa23.02■■□□□ 1.28
DDX54-207ENST00000550016 ZNF444Q8N0Y2 327 aaPredicted RBP23.02■■□□□ 1.28
DDX54-207ENST00000550016 TBC1D8O95759 1140 aa23.01■■□□□ 1.27
DDX54-207ENST00000550016 GPAT2Q6NUI2 795 aa23.01■■□□□ 1.27
DDX54-207ENST00000550016 PROCA1Q8NCQ7 364 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms