RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 ASNSP08243 561 aa18.89■□□□□ 0.61
RAB5C-205ENST00000550013 BACE1P56817 501 aa18.89■□□□□ 0.61
RAB5C-205ENST00000550013 IRX3P78415 501 aaPredicted RBP18.89■□□□□ 0.61
RAB5C-205ENST00000550013 ATP8B2P98198 1209 aa18.89■□□□□ 0.61
RAB5C-205ENST00000550013 ZKSCAN2Q63HK3 967 aa18.89■□□□□ 0.61
RAB5C-205ENST00000550013 METTL16Q86W50 562 aaKnown RBP18.89■□□□□ 0.61
RAB5C-205ENST00000550013 CRACR2BQ8N4Y2 399 aaPredicted RBP18.89■□□□□ 0.61
RAB5C-205ENST00000550013 P2RX7Q99572 595 aaKnown RBP18.89■□□□□ 0.61
RAB5C-205ENST00000550013 PALD1Q9ULE6 856 aa18.89■□□□□ 0.61
RAB5C-205ENST00000550013 MYH1P12882 1939 aa18.89■□□□□ 0.61
RAB5C-205ENST00000550013 CAPN2P17655 700 aa18.88■□□□□ 0.61
RAB5C-205ENST00000550013 DYNLL1P63167 89 aaKnown RBP18.88■□□□□ 0.61
RAB5C-205ENST00000550013 TXNRD2Q9NNW7 524 aa18.88■□□□□ 0.61
RAB5C-205ENST00000550013 TLR7Q9NYK1 1049 aaKnown RBP18.88■□□□□ 0.61
RAB5C-205ENST00000550013 TMOD4Q9NZQ9 345 aa18.88■□□□□ 0.61
RAB5C-205ENST00000550013 DBNLQ9UJU6 430 aaKnown RBP18.88■□□□□ 0.61
RAB5C-205ENST00000550013 HOXA7P31268 230 aaPredicted RBP18.87■□□□□ 0.61
RAB5C-205ENST00000550013 HERVK_113P62684 666 aa18.87■□□□□ 0.61
RAB5C-205ENST00000550013 DDX60LQ5H9U9 1706 aaKnown RBP18.87■□□□□ 0.61
RAB5C-205ENST00000550013 NECAB2Q7Z6G3 386 aa18.87■□□□□ 0.61
RAB5C-205ENST00000550013 FOXP4Q8IVH2 680 aaPredicted RBP18.87■□□□□ 0.61
RAB5C-205ENST00000550013 TRIB2Q92519 343 aa18.87■□□□□ 0.61
RAB5C-205ENST00000550013 TRIM34Q9BYJ4 488 aa18.87■□□□□ 0.61
RAB5C-205ENST00000550013 ZBTB21Q9ULJ3 1066 aa18.87■□□□□ 0.61
RAB5C-205ENST00000550013 RPTORQ8N122 1335 aa18.86■□□□□ 0.61
RAB5C-205ENST00000550013 CYP2B6P20813 491 aa18.86■□□□□ 0.61
RAB5C-205ENST00000550013 ZNF512BQ96KM6 892 aaPredicted RBP18.86■□□□□ 0.61
RAB5C-205ENST00000550013 CCDC8Q9H0W5 538 aaPredicted RBP18.86■□□□□ 0.61
RAB5C-205ENST00000550013 STAP2Q9UGK3 403 aa18.86■□□□□ 0.61
RAB5C-205ENST00000550013 C19orf81C9J6K1 198 aa18.85■□□□□ 0.61
RAB5C-205ENST00000550013 USP17L10C9JJH3 530 aa18.85■□□□□ 0.61
RAB5C-205ENST00000550013 CYP7A1P22680 504 aa18.85■□□□□ 0.61
RAB5C-205ENST00000550013 MNX1P50219 401 aaPredicted RBP18.85■□□□□ 0.61
RAB5C-205ENST00000550013 GPRC5AQ8NFJ5 357 aa18.85■□□□□ 0.61
RAB5C-205ENST00000550013 HMX1Q9NP08 348 aaPredicted RBP18.85■□□□□ 0.61
RAB5C-205ENST00000550013 NOP58Q9Y2X3 529 aaKnown RBP18.85■□□□□ 0.61
RAB5C-205ENST00000550013 LAMA3Q16787 3333 aa18.84■□□□□ 0.61
RAB5C-205ENST00000550013 RLBP1P12271 317 aa18.84■□□□□ 0.61
RAB5C-205ENST00000550013 POTEEQ6S8J3 1075 aa18.84■□□□□ 0.61
RAB5C-205ENST00000550013 C7orf61Q8IZ16 206 aa18.84■□□□□ 0.61
RAB5C-205ENST00000550013 ANKLE1Q8NAG6 615 aa18.84■□□□□ 0.61
RAB5C-205ENST00000550013 MIGA1Q8NAN2 632 aa18.84■□□□□ 0.61
RAB5C-205ENST00000550013 EAF2Q96CJ1 260 aaPredicted RBP18.84■□□□□ 0.61
RAB5C-205ENST00000550013 GINM1Q9NU53 330 aa18.84■□□□□ 0.61
RAB5C-205ENST00000550013 RBPJLQ9UBG7 517 aa18.84■□□□□ 0.61
RAB5C-205ENST00000550013 NDUFB9Q9Y6M9 179 aa18.84■□□□□ 0.61
RAB5C-205ENST00000550013 SOX1O00570 391 aaPredicted RBP18.83■□□□□ 0.6
RAB5C-205ENST00000550013 IDH1O75874 414 aaKnown RBP18.83■□□□□ 0.6
RAB5C-205ENST00000550013 GH2P01242 217 aa18.83■□□□□ 0.6
RAB5C-205ENST00000550013 HLA-DOAP06340 250 aa18.83■□□□□ 0.6
RAB5C-205ENST00000550013 Q3C1V9 767 aa18.83■□□□□ 0.6
RAB5C-205ENST00000550013 MAP3K21Q5TCX8 1036 aa18.83■□□□□ 0.6
RAB5C-205ENST00000550013 ITPRIPQ8IWB1 547 aa18.83■□□□□ 0.6
RAB5C-205ENST00000550013 PAGR1Q9BTK6 254 aa18.83■□□□□ 0.6
RAB5C-205ENST00000550013 EMILIN3Q9NT22 766 aa18.83■□□□□ 0.6
RAB5C-205ENST00000550013 PRKAR2AP13861 404 aaKnown RBP18.82■□□□□ 0.6
RAB5C-205ENST00000550013 ERVK-9P63128 1117 aa18.82■□□□□ 0.6
RAB5C-205ENST00000550013 ERVK-24P63145 666 aa18.82■□□□□ 0.6
RAB5C-205ENST00000550013 FTSJ3Q8IY81 847 aaKnown RBP18.82■□□□□ 0.6
RAB5C-205ENST00000550013 NUDT12Q9BQG2 462 aa18.82■□□□□ 0.6
RAB5C-205ENST00000550013 NBPF3Q9H094 633 aa18.82■□□□□ 0.6
RAB5C-205ENST00000550013 PORCNQ9H237 461 aa18.82■□□□□ 0.6
RAB5C-205ENST00000550013 ZMYND8Q9ULU4 1186 aaPredicted RBP18.82■□□□□ 0.6
RAB5C-205ENST00000550013 A0A1W2PPC1 479 aa18.81■□□□□ 0.6
RAB5C-205ENST00000550013 IGSF3O75054 1194 aa18.81■□□□□ 0.6
RAB5C-205ENST00000550013 USP5P45974 858 aa18.81■□□□□ 0.6
RAB5C-205ENST00000550013 ZYXQ15942 572 aaKnown RBP18.81■□□□□ 0.6
RAB5C-205ENST00000550013 USP17L2Q6R6M4 530 aa18.81■□□□□ 0.6
RAB5C-205ENST00000550013 MAGEB6Q8N7X4 407 aa18.81■□□□□ 0.6
RAB5C-205ENST00000550013 SOCS4Q8WXH5 440 aa18.81■□□□□ 0.6
RAB5C-205ENST00000550013 ANTXR1Q9H6X2 564 aa18.81■□□□□ 0.6
RAB5C-205ENST00000550013 OGDHLQ9ULD0 1010 aa18.81■□□□□ 0.6
RAB5C-205ENST00000550013 XRCC5P13010 732 aaKnown RBP18.8■□□□□ 0.6
RAB5C-205ENST00000550013 MAPK4P31152 587 aa18.8■□□□□ 0.6
RAB5C-205ENST00000550013 PDE3AQ14432 1141 aa18.8■□□□□ 0.6
RAB5C-205ENST00000550013 CCL14Q16627 93 aa18.8■□□□□ 0.6
RAB5C-205ENST00000550013 GPR142Q7Z601 462 aa18.8■□□□□ 0.6
RAB5C-205ENST00000550013 USP6NLQ92738 828 aa18.8■□□□□ 0.6
RAB5C-205ENST00000550013 LRCH3Q96II8 777 aa18.8■□□□□ 0.6
RAB5C-205ENST00000550013 C11orf49Q9H6J7 331 aa18.8■□□□□ 0.6
RAB5C-205ENST00000550013 ZKSCAN1P17029 563 aaPredicted RBP18.79■□□□□ 0.6
RAB5C-205ENST00000550013 CACNB2Q08289 660 aaPredicted RBP18.79■□□□□ 0.6
RAB5C-205ENST00000550013 MORN1Q5T089 497 aa18.79■□□□□ 0.6
RAB5C-205ENST00000550013 TATDN1Q6P1N9 297 aa18.79■□□□□ 0.6
RAB5C-205ENST00000550013 CCAR1Q8IX12 1150 aaKnown RBP18.79■□□□□ 0.6
RAB5C-205ENST00000550013 GDF15Q99988 308 aa18.79■□□□□ 0.6
RAB5C-205ENST00000550013 PFASO15067 1338 aa18.78■□□□□ 0.6
RAB5C-205ENST00000550013 NAV1Q8NEY1 1877 aa18.78■□□□□ 0.6
RAB5C-205ENST00000550013 CNMDO75829 334 aa18.78■□□□□ 0.6
RAB5C-205ENST00000550013 SYN1P17600 705 aa18.78■□□□□ 0.6
RAB5C-205ENST00000550013 CEP85Q6P2H3 762 aa18.78■□□□□ 0.6
RAB5C-205ENST00000550013 PLEKHH3Q7Z736 793 aa18.78■□□□□ 0.6
RAB5C-205ENST00000550013 ACER1Q8TDN7 264 aa18.78■□□□□ 0.6
RAB5C-205ENST00000550013 GTF3C2Q8WUA4 911 aaPredicted RBP18.78■□□□□ 0.6
RAB5C-205ENST00000550013 C12orf42Q96LP6 360 aa18.78■□□□□ 0.6
RAB5C-205ENST00000550013 FEZ1Q99689 392 aa18.78■□□□□ 0.6
RAB5C-205ENST00000550013 SERPINB13Q9UIV8 391 aa18.78■□□□□ 0.6
RAB5C-205ENST00000550013 EXOC6BQ9Y2D4 811 aa18.78■□□□□ 0.6
RAB5C-205ENST00000550013 COL6A3P12111 3177 aa18.78■□□□□ 0.6
RAB5C-205ENST00000550013 FRMPD3Q5JV73 1810 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms