RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 BACH2Q9BYV9 841 aa6.71□□□□□ -1.34
SNRPF-202ENST00000549580 NIF3L1Q9GZT8 377 aa6.71□□□□□ -1.34
SNRPF-202ENST00000549580 EPB41L4BQ9H329 900 aa6.71□□□□□ -1.34
SNRPF-202ENST00000549580 CARS2Q9HA77 564 aaKnown RBP6.71□□□□□ -1.34
SNRPF-202ENST00000549580 KRT82Q9NSB4 513 aa6.71□□□□□ -1.34
SNRPF-202ENST00000549580 IGF2BP3O00425 579 aaKnown RBP eCLIP6.7□□□□□ -1.34
SNRPF-202ENST00000549580 CPNE3O75131 537 aaKnown RBP6.7□□□□□ -1.34
SNRPF-202ENST00000549580 DAB2P98082 770 aa6.7□□□□□ -1.34
SNRPF-202ENST00000549580 GRM2Q14416 872 aa6.7□□□□□ -1.34
SNRPF-202ENST00000549580 RPS26P11Q5JNZ5 115 aaPredicted RBP6.7□□□□□ -1.34
SNRPF-202ENST00000549580 PPM1JQ5JR12 505 aa6.7□□□□□ -1.34
SNRPF-202ENST00000549580 PRPF40BQ6NWY9 871 aaKnown RBP6.7□□□□□ -1.34
SNRPF-202ENST00000549580 TMC4Q7Z404 712 aa6.7□□□□□ -1.34
SNRPF-202ENST00000549580 RNF214Q8ND24 703 aa6.7□□□□□ -1.34
SNRPF-202ENST00000549580 CCDC74AQ96AQ1 378 aa6.7□□□□□ -1.34
SNRPF-202ENST00000549580 DUSP9Q99956 384 aaKnown RBP6.7□□□□□ -1.34
SNRPF-202ENST00000549580 DCP1AQ9NPI6 582 aaPredicted RBP6.7□□□□□ -1.34
SNRPF-202ENST00000549580 PRDM10Q9NQV6 1147 aa6.7□□□□□ -1.34
SNRPF-202ENST00000549580 PARP2Q9UGN5 583 aa6.7□□□□□ -1.34
SNRPF-202ENST00000549580 GPN3Q9UHW5 284 aaPredicted RBP6.7□□□□□ -1.34
SNRPF-202ENST00000549580 WWC3Q9ULE0 1092 aa6.7□□□□□ -1.34
SNRPF-202ENST00000549580 SYN1P17600 705 aa6.69□□□□□ -1.34
SNRPF-202ENST00000549580 NFKB2Q00653 900 aa6.69□□□□□ -1.34
SNRPF-202ENST00000549580 TSNAXIP1Q2TAA8 658 aa6.69□□□□□ -1.34
SNRPF-202ENST00000549580 MAP1SQ66K74 1059 aaPredicted RBP6.69□□□□□ -1.34
SNRPF-202ENST00000549580 EPS8L3Q8TE67 593 aaKnown RBP6.69□□□□□ -1.34
SNRPF-202ENST00000549580 C8orf37Q96NL8 207 aa6.69□□□□□ -1.34
SNRPF-202ENST00000549580 ATP13A1Q9HD20 1204 aa6.69□□□□□ -1.34
SNRPF-202ENST00000549580 GTF2IRD1Q9UHL9 959 aa6.69□□□□□ -1.34
SNRPF-202ENST00000549580 CNTNAP4Q9C0A0 1308 aa6.69□□□□□ -1.34
SNRPF-202ENST00000549580 EOMESO95936 686 aa6.68□□□□□ -1.34
SNRPF-202ENST00000549580 NTF4P34130 210 aa6.68□□□□□ -1.34
SNRPF-202ENST00000549580 CLCN7P51798 805 aa6.68□□□□□ -1.34
SNRPF-202ENST00000549580 ATP2B2Q01814 1243 aa6.68□□□□□ -1.34
SNRPF-202ENST00000549580 XPCQ01831 940 aaPredicted RBP6.68□□□□□ -1.34
SNRPF-202ENST00000549580 ALG1LQ6GMV1 187 aa6.68□□□□□ -1.34
SNRPF-202ENST00000549580 GPBAR1Q8TDU6 330 aa6.68□□□□□ -1.34
SNRPF-202ENST00000549580 KCNC2Q96PR1 638 aa6.68□□□□□ -1.34
SNRPF-202ENST00000549580 SETDB2Q96T68 719 aa6.68□□□□□ -1.34
SNRPF-202ENST00000549580 IRF2BPLQ9H1B7 796 aa6.68□□□□□ -1.34
SNRPF-202ENST00000549580 RNF19AQ9NV58 838 aa6.68□□□□□ -1.34
SNRPF-202ENST00000549580 PNMA6FA0A0J9YX94 578 aa6.67□□□□□ -1.34
SNRPF-202ENST00000549580 LOC105371045A0A1W2PR82 267 aa6.67□□□□□ -1.34
SNRPF-202ENST00000549580 PRR33A8MZF0 331 aa6.67□□□□□ -1.34
SNRPF-202ENST00000549580 EIF1AYO14602 144 aaKnown RBP6.67□□□□□ -1.34
SNRPF-202ENST00000549580 SCAMP3O14828 347 aaKnown RBP6.67□□□□□ -1.34
SNRPF-202ENST00000549580 SRFP11831 508 aa6.67□□□□□ -1.34
SNRPF-202ENST00000549580 ITGAEP38570 1179 aa6.67□□□□□ -1.34
SNRPF-202ENST00000549580 FCGRTP55899 365 aa6.67□□□□□ -1.34
SNRPF-202ENST00000549580 ERVK-24P63145 666 aa6.67□□□□□ -1.34
SNRPF-202ENST00000549580 SULF2Q8IWU5 870 aa6.67□□□□□ -1.34
SNRPF-202ENST00000549580 FBF1Q8TES7 1133 aa6.67□□□□□ -1.34
SNRPF-202ENST00000549580 HSPA12BQ96MM6 686 aa6.67□□□□□ -1.34
SNRPF-202ENST00000549580 ZCCHC4Q9H5U6 513 aa6.67□□□□□ -1.34
SNRPF-202ENST00000549580 DCDC2CA8MYV0 355 aa6.66□□□□□ -1.34
SNRPF-202ENST00000549580 HDLBPQ00341 1268 aaKnown RBP6.66□□□□□ -1.34
SNRPF-202ENST00000549580 PSMD2Q13200 908 aa6.66□□□□□ -1.34
SNRPF-202ENST00000549580 PI16Q6UXB8 463 aa6.66□□□□□ -1.34
SNRPF-202ENST00000549580 DTHD1Q6ZMT9 781 aa6.66□□□□□ -1.34
SNRPF-202ENST00000549580 FAM161BQ96MY7 647 aa6.66□□□□□ -1.34
SNRPF-202ENST00000549580 DNAJC25Q9H1X3 360 aa6.66□□□□□ -1.34
SNRPF-202ENST00000549580 SEMA3GQ9NS98 782 aa6.66□□□□□ -1.34
SNRPF-202ENST00000549580 TMEM39AQ9NV64 488 aa6.66□□□□□ -1.34
SNRPF-202ENST00000549580 GNAT3A8MTJ3 354 aa6.65□□□□□ -1.34
SNRPF-202ENST00000549580 SORBS3O60504 671 aa6.65□□□□□ -1.34
SNRPF-202ENST00000549580 NEFLP07196 543 aa6.65□□□□□ -1.34
SNRPF-202ENST00000549580 BMP7P18075 431 aa6.65□□□□□ -1.34
SNRPF-202ENST00000549580 GNA15P30679 374 aa6.65□□□□□ -1.34
SNRPF-202ENST00000549580 NFIXQ14938 502 aa6.65□□□□□ -1.34
SNRPF-202ENST00000549580 CDKAL1Q5VV42 579 aa6.65□□□□□ -1.34
SNRPF-202ENST00000549580 C12orf40Q86WS4 652 aa6.65□□□□□ -1.34
SNRPF-202ENST00000549580 GRIN3AQ8TCU5 1115 aa6.65□□□□□ -1.34
SNRPF-202ENST00000549580 FRMD6Q96NE9 622 aa6.65□□□□□ -1.34
SNRPF-202ENST00000549580 SLC26A8Q96RN1 970 aa6.65□□□□□ -1.34
SNRPF-202ENST00000549580 MRS2Q9HD23 443 aa6.65□□□□□ -1.34
SNRPF-202ENST00000549580 RTEL1Q9NZ71 1219 aa6.65□□□□□ -1.34
SNRPF-202ENST00000549580 ARNTP27540 789 aa6.64□□□□□ -1.35
SNRPF-202ENST00000549580 ZC3H6P61129 1189 aaKnown RBP6.64□□□□□ -1.35
SNRPF-202ENST00000549580 SKOR2Q2VWA4 1001 aaPredicted RBP6.64□□□□□ -1.35
SNRPF-202ENST00000549580 METTL16Q86W50 562 aaKnown RBP6.64□□□□□ -1.35
SNRPF-202ENST00000549580 METTL5Q9NRN9 209 aaKnown RBP6.64□□□□□ -1.35
SNRPF-202ENST00000549580 H3BS24 57 aa6.63□□□□□ -1.35
SNRPF-202ENST00000549580 PPP2R3AQ06190 1150 aa6.63□□□□□ -1.35
SNRPF-202ENST00000549580 CXorf38Q8TB03 319 aa6.63□□□□□ -1.35
SNRPF-202ENST00000549580 KCNN1Q92952 543 aa6.63□□□□□ -1.35
SNRPF-202ENST00000549580 ACSBG1Q96GR2 724 aa6.63□□□□□ -1.35
SNRPF-202ENST00000549580 CBX8Q9HC52 389 aa6.63□□□□□ -1.35
SNRPF-202ENST00000549580 USP35Q9P2H5 1018 aa6.63□□□□□ -1.35
SNRPF-202ENST00000549580 TRAK1Q9UPV9 953 aa6.63□□□□□ -1.35
SNRPF-202ENST00000549580 AK5Q9Y6K8 562 aa6.63□□□□□ -1.35
SNRPF-202ENST00000549580 ADAMTS20P59510 1910 aa6.62□□□□□ -1.35
SNRPF-202ENST00000549580 ERVFC1P60507 584 aa6.62□□□□□ -1.35
SNRPF-202ENST00000549580 RAD51AP2Q09MP3 1159 aa6.62□□□□□ -1.35
SNRPF-202ENST00000549580 ZNF252P-AS1Q0IIN9 211 aa6.62□□□□□ -1.35
SNRPF-202ENST00000549580 TMEM87AQ8NBN3 555 aa6.62□□□□□ -1.35
SNRPF-202ENST00000549580 TMPRSS5Q9H3S3 457 aa6.62□□□□□ -1.35
SNRPF-202ENST00000549580 PRDM5Q9NQX1 630 aaPredicted RBP6.62□□□□□ -1.35
SNRPF-202ENST00000549580 VTI1BQ9UEU0 232 aa6.62□□□□□ -1.35
SNRPF-202ENST00000549580 SLITRK5O94991 958 aa6.61□□□□□ -1.35
SNRPF-202ENST00000549580 ERCC5P28715 1186 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms