RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 LOC285556D6RIA3 1793 aa21.13■□□□□ 0.97
RAPGEF3-220ENST00000549347 SMIM22K7EJ46 135 aa21.12■□□□□ 0.97
RAPGEF3-220ENST00000549347 ASNSP08243 561 aa21.12■□□□□ 0.97
RAPGEF3-220ENST00000549347 HSPD1P10809 573 aaKnown RBP21.12■□□□□ 0.97
RAPGEF3-220ENST00000549347 SREBF2Q12772 1141 aa21.12■□□□□ 0.97
RAPGEF3-220ENST00000549347 ALX1Q15699 326 aa21.12■□□□□ 0.97
RAPGEF3-220ENST00000549347 SLC44A5Q8NCS7 719 aa21.12■□□□□ 0.97
RAPGEF3-220ENST00000549347 DYNLL2Q96FJ2 89 aa21.12■□□□□ 0.97
RAPGEF3-220ENST00000549347 WBP1LQ9NX94 342 aa21.12■□□□□ 0.97
RAPGEF3-220ENST00000549347 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.12■□□□□ 0.97
RAPGEF3-220ENST00000549347 KCNH4Q9UQ05 1017 aa21.12■□□□□ 0.97
RAPGEF3-220ENST00000549347 TESPA1A2RU30 521 aaPredicted RBP21.11■□□□□ 0.97
RAPGEF3-220ENST00000549347 IRF6O14896 467 aa21.11■□□□□ 0.97
RAPGEF3-220ENST00000549347 JAG1P78504 1218 aa21.11■□□□□ 0.97
RAPGEF3-220ENST00000549347 MS4A4AQ96JQ5 239 aa21.11■□□□□ 0.97
RAPGEF3-220ENST00000549347 TBC1D2Q9BYX2 928 aa21.11■□□□□ 0.97
RAPGEF3-220ENST00000549347 IL25Q9H293 177 aa21.11■□□□□ 0.97
RAPGEF3-220ENST00000549347 ZBTB21Q9ULJ3 1066 aa21.11■□□□□ 0.97
RAPGEF3-220ENST00000549347 PCNTO95613 3336 aa21.11■□□□□ 0.97
RAPGEF3-220ENST00000549347 MINDY4BA8MYZ0 360 aa21.1■□□□□ 0.97
RAPGEF3-220ENST00000549347 GDF11O95390 407 aa21.1■□□□□ 0.97
RAPGEF3-220ENST00000549347 TM4SF4P48230 202 aa21.1■□□□□ 0.97
RAPGEF3-220ENST00000549347 GTF2A2P52657 109 aa21.1■□□□□ 0.97
RAPGEF3-220ENST00000549347 SHROOM1Q2M3G4 852 aaPredicted RBP21.1■□□□□ 0.97
RAPGEF3-220ENST00000549347 CERKLQ49MI3 558 aaPredicted RBP21.1■□□□□ 0.97
RAPGEF3-220ENST00000549347 RUFY2Q8WXA3 655 aa21.1■□□□□ 0.97
RAPGEF3-220ENST00000549347 CDK8P49336 464 aa21.09■□□□□ 0.97
RAPGEF3-220ENST00000549347 INHBEP58166 350 aa21.09■□□□□ 0.97
RAPGEF3-220ENST00000549347 SNAPC2Q13487 334 aa21.09■□□□□ 0.97
RAPGEF3-220ENST00000549347 AFG3L2Q9Y4W6 797 aa21.09■□□□□ 0.97
RAPGEF3-220ENST00000549347 ZHX2Q9Y6X8 837 aa21.09■□□□□ 0.97
RAPGEF3-220ENST00000549347 USP17L5A8MUK1 530 aa21.08■□□□□ 0.97
RAPGEF3-220ENST00000549347 CXCL11O14625 94 aa21.08■□□□□ 0.97
RAPGEF3-220ENST00000549347 GH2P01242 217 aa21.08■□□□□ 0.97
RAPGEF3-220ENST00000549347 HSPA1AP0DMV8 641 aaKnown RBP21.08■□□□□ 0.97
RAPGEF3-220ENST00000549347 HSPA1BP0DMV9 641 aaKnown RBP21.08■□□□□ 0.97
RAPGEF3-220ENST00000549347 PPARAQ07869 468 aa21.08■□□□□ 0.97
RAPGEF3-220ENST00000549347 ABCB5Q2M3G0 1257 aa21.08■□□□□ 0.97
RAPGEF3-220ENST00000549347 CCDC84Q86UT8 332 aaPredicted RBP21.08■□□□□ 0.97
RAPGEF3-220ENST00000549347 DSCC1Q9BVC3 393 aa21.08■□□□□ 0.97
RAPGEF3-220ENST00000549347 SGSM2O43147 1006 aa21.07■□□□□ 0.96
RAPGEF3-220ENST00000549347 FGAP02671 866 aa21.07■□□□□ 0.96
RAPGEF3-220ENST00000549347 CETPP11597 493 aa21.07■□□□□ 0.96
RAPGEF3-220ENST00000549347 BRI3BPQ8WY22 251 aa21.07■□□□□ 0.96
RAPGEF3-220ENST00000549347 CCDC17Q96LX7 622 aa21.07■□□□□ 0.96
RAPGEF3-220ENST00000549347 WDR18Q9BV38 432 aa21.07■□□□□ 0.96
RAPGEF3-220ENST00000549347 AS3MTQ9HBK9 375 aa21.07■□□□□ 0.96
RAPGEF3-220ENST00000549347 SAGE1Q9NXZ1 904 aa21.07■□□□□ 0.96
RAPGEF3-220ENST00000549347 ANAPC4Q9UJX5 808 aa21.07■□□□□ 0.96
RAPGEF3-220ENST00000549347 CCL15-CCL14A0A0B4J2E2 113 aa21.06■□□□□ 0.96
RAPGEF3-220ENST00000549347 A0A0G2JLL6 359 aaPredicted RBP21.06■□□□□ 0.96
RAPGEF3-220ENST00000549347 CA12O43570 354 aa21.06■□□□□ 0.96
RAPGEF3-220ENST00000549347 CCL15Q16663 113 aa21.06■□□□□ 0.96
RAPGEF3-220ENST00000549347 PRRT2Q7Z6L0 340 aaPredicted RBP21.06■□□□□ 0.96
RAPGEF3-220ENST00000549347 IFNL1Q8IU54 200 aa21.06■□□□□ 0.96
RAPGEF3-220ENST00000549347 ZNF280CQ8ND82 737 aa21.06■□□□□ 0.96
RAPGEF3-220ENST00000549347 IGF2BP3O00425 579 aaKnown RBP eCLIP21.05■□□□□ 0.96
RAPGEF3-220ENST00000549347 SLC3A2P08195 630 aaKnown RBP21.05■□□□□ 0.96
RAPGEF3-220ENST00000549347 AKR1B1P15121 316 aa21.05■□□□□ 0.96
RAPGEF3-220ENST00000549347 GUCY1A2P33402 732 aa21.05■□□□□ 0.96
RAPGEF3-220ENST00000549347 TMEM179Q6ZVK1 233 aa21.05■□□□□ 0.96
RAPGEF3-220ENST00000549347 PTPN18Q99952 460 aa21.05■□□□□ 0.96
RAPGEF3-220ENST00000549347 BEGAINQ9BUH8 593 aa21.05■□□□□ 0.96
RAPGEF3-220ENST00000549347 ZNF287Q9HBT7 754 aa21.05■□□□□ 0.96
RAPGEF3-220ENST00000549347 CABP5Q9NP86 173 aa21.05■□□□□ 0.96
RAPGEF3-220ENST00000549347 TRIM75PA6NK02 468 aa21.04■□□□□ 0.96
RAPGEF3-220ENST00000549347 RASA1P20936 1047 aa21.04■□□□□ 0.96
RAPGEF3-220ENST00000549347 MOGSQ13724 837 aa21.04■□□□□ 0.96
RAPGEF3-220ENST00000549347 PLIN4Q96Q06 1357 aa21.04■□□□□ 0.96
RAPGEF3-220ENST00000549347 CDC45O75419 566 aa21.03■□□□□ 0.96
RAPGEF3-220ENST00000549347 ALDH1A1P00352 501 aa21.03■□□□□ 0.96
RAPGEF3-220ENST00000549347 PDE4BQ07343 736 aa21.03■□□□□ 0.96
RAPGEF3-220ENST00000549347 SPP2Q13103 211 aa21.03■□□□□ 0.96
RAPGEF3-220ENST00000549347 SEPT2Q15019 361 aa21.03■□□□□ 0.96
RAPGEF3-220ENST00000549347 RAB3GAP1Q15042 981 aa21.03■□□□□ 0.96
RAPGEF3-220ENST00000549347 STK11IPQ8N1F8 1099 aa21.03■□□□□ 0.96
RAPGEF3-220ENST00000549347 ESYT1Q9BSJ8 1104 aa21.03■□□□□ 0.96
RAPGEF3-220ENST00000549347 CFHR5Q9BXR6 569 aa21.03■□□□□ 0.96
RAPGEF3-220ENST00000549347 MKNK2Q9HBH9 465 aa21.03■□□□□ 0.96
RAPGEF3-220ENST00000549347 ZCCHC17Q9NP64 241 aaKnown RBP21.03■□□□□ 0.96
RAPGEF3-220ENST00000549347 RNF186Q9NXI6 227 aa21.03■□□□□ 0.96
RAPGEF3-220ENST00000549347 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.03■□□□□ 0.96
RAPGEF3-220ENST00000549347 MPHOSPH10O00566 681 aaKnown RBP21.02■□□□□ 0.96
RAPGEF3-220ENST00000549347 FOXN1O15353 648 aa21.02■□□□□ 0.96
RAPGEF3-220ENST00000549347 CTDSPL2Q05D32 466 aa21.02■□□□□ 0.96
RAPGEF3-220ENST00000549347 SH3D19Q5HYK7 790 aa21.02■□□□□ 0.96
RAPGEF3-220ENST00000549347 OTUD7BQ6GQQ9 843 aa21.02■□□□□ 0.96
RAPGEF3-220ENST00000549347 BTBD19C9JJ37 291 aa21.01■□□□□ 0.95
RAPGEF3-220ENST00000549347 FGRP09769 529 aa21.01■□□□□ 0.95
RAPGEF3-220ENST00000549347 BACE1P56817 501 aa21.01■□□□□ 0.95
RAPGEF3-220ENST00000549347 MTMR2Q13614 643 aa21.01■□□□□ 0.95
RAPGEF3-220ENST00000549347 FASTKD5Q7L8L6 764 aaKnown RBP21.01■□□□□ 0.95
RAPGEF3-220ENST00000549347 ANKRD23Q86SG2 305 aa21.01■□□□□ 0.95
RAPGEF3-220ENST00000549347 PROCA1Q8NCQ7 364 aaPredicted RBP21.01■□□□□ 0.95
RAPGEF3-220ENST00000549347 NBPF3Q9H094 633 aa21.01■□□□□ 0.95
RAPGEF3-220ENST00000549347 CTNNA3Q9UI47 895 aa21.01■□□□□ 0.95
RAPGEF3-220ENST00000549347 USP17L10C9JJH3 530 aa21■□□□□ 0.95
RAPGEF3-220ENST00000549347 PRDM1O75626 825 aa21■□□□□ 0.95
RAPGEF3-220ENST00000549347 TRPA1O75762 1119 aa21■□□□□ 0.95
RAPGEF3-220ENST00000549347 PCP11498 1178 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms