RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 LCORLQ8N3X6 602 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 WASF1Q92558 559 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 A0A087X0B3 334 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 SMIM22K7EJ46 135 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 COBLO75128 1261 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 CYP2C19P33261 490 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 TDO2P48775 406 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 ALX1Q15699 326 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 RILPL1Q5EBL4 403 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 CC2D1AQ6P1N0 951 aaPredicted RBP16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 NUTM2AQ8IVF1 878 aaPredicted RBP16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 SMYD4Q8IYR2 804 aaPredicted RBP16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 MIGA1Q8NAN2 632 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 CCDC12Q8WUD4 166 aaPredicted RBP16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 DNAJC5Q9H3Z4 198 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 NR1I3Q14994 352 aa16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 PUM3Q15397 648 aaKnown RBP16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 CRACR2BQ8N4Y2 399 aaPredicted RBP16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 SHISA4Q96DD7 197 aa16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 EPSTI1Q96J88 318 aa16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 PARD6BQ9BYG5 372 aa16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 FOXP1Q9H334 677 aaPredicted RBP16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 COL5A2P05997 1499 aaPredicted RBP16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 LRP6O75581 1613 aa16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 TOGARAM1Q9Y4F4 1720 aa16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 CCDC66A2RUB6 948 aa16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 STARD3NLO95772 234 aa16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 UQCRFS1P1P0C7P4 283 aa16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 CADPS2Q86UW7 1296 aa16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 SLC4A4Q9Y6R1 1079 aa16.14■□□□□ 0.17
RAPGEF3-218ENST00000548919 SHANK3Q9BYB0 1731 aa16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 CD44P16070 742 aaKnown RBP16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 PLCD1P51178 756 aa16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 MAP3K12Q12852 859 aa16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 RSRC2Q7L4I2 434 aaKnown RBP16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 LPIN2Q92539 896 aa16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 KRT23Q9C075 422 aa16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 DACH1Q9UI36 760 aa16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 SRPRBQ9Y5M8 271 aaKnown RBP16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 EARS2Q5JPH6 523 aaKnown RBP16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 ELOA2Q8IYF1 753 aaPredicted RBP16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 CNNM2Q9H8M5 875 aa16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 MYH3P11055 1940 aa16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 STRCP1A6NGW2 1772 aa16.13■□□□□ 0.17
RAPGEF3-218ENST00000548919 GOLGA6L9A6NEM1 432 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 DEXIO95424 95 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 TPM1P09493 284 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 ST5P78524 1137 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 RBL2Q08999 1139 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 RAD9BQ6WBX8 426 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 GPR161Q8N6U8 529 aaKnown RBP16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 A0A1B0GTH6 734 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 AKR1B15C9JRZ8 316 aaPredicted RBP16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 WNT7AO00755 349 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 PRDM1O75626 825 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 FGFR2P21802 821 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 APTXQ7Z2E3 356 aaKnown RBP16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 FANCBQ8NB91 859 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 NEK11Q8NG66 645 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 STAMQ92783 540 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 CARD10Q9BWT7 1032 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 VPS54Q9P1Q0 977 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 ZBTB1Q9Y2K1 713 aa16.12■□□□□ 0.17
RAPGEF3-218ENST00000548919 PDE8AO60658 829 aa16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 OAS2P29728 719 aaKnown RBP16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 GYS2P54840 703 aa16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 EVA1CP58658 441 aa16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 SART3Q15020 963 aaKnown RBP16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 ZNF654Q8IZM8 581 aa16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 IQSEC3Q9UPP2 1182 aaPredicted RBP16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 A0A0U1RQG5 324 aaPredicted RBP16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 ERICH2A1L162 156 aa16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 TFRCP02786 760 aaKnown RBP16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 BCAMP50895 628 aa16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 IGSF22Q8N9C0 903 aa16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 SPATA20Q8TB22 786 aa16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 PUF60Q9UHX1 559 aaKnown RBP16.11■□□□□ 0.17
RAPGEF3-218ENST00000548919 CCDC175P0C221 793 aa16.1■□□□□ 0.17
RAPGEF3-218ENST00000548919 NOM1Q5C9Z4 860 aaKnown RBP16.1■□□□□ 0.17
RAPGEF3-218ENST00000548919 ZNF579Q8NAF0 562 aaKnown RBP16.1■□□□□ 0.17
RAPGEF3-218ENST00000548919 STAG1Q8WVM7 1258 aa16.1■□□□□ 0.17
RAPGEF3-218ENST00000548919 TRERF1Q96PN7 1200 aa16.1■□□□□ 0.17
RAPGEF3-218ENST00000548919 MINDY4BA8MYZ0 360 aa16.1■□□□□ 0.17
RAPGEF3-218ENST00000548919 SMC1AQ14683 1233 aaKnown RBP16.1■□□□□ 0.17
RAPGEF3-218ENST00000548919 TRIML1Q8N9V2 468 aa16.1■□□□□ 0.17
RAPGEF3-218ENST00000548919 SDR42E1Q8WUS8 393 aa16.1■□□□□ 0.17
RAPGEF3-218ENST00000548919 UBXN6Q9BZV1 441 aa16.1■□□□□ 0.17
RAPGEF3-218ENST00000548919 ARFGAP3Q9NP61 516 aa16.1■□□□□ 0.17
RAPGEF3-218ENST00000548919 HNRNPH2P55795 449 aaKnown RBP16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 BRINP3Q76B58 766 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 GOLGA1Q92805 767 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 ADGRG1Q9Y653 693 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 SYNRGQ9UMZ2 1314 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 ABL1P00519 1130 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 SLC5A1P13866 664 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 ERCC5P28715 1186 aaPredicted RBP16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 PPFIBP1Q86W92 1011 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 RABGGTAQ92696 567 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms