RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 COL2A1P02458 1487 aaPredicted RBP23.97■■□□□ 1.43
CTDSP2-204ENST00000548823 PHIPQ8WWQ0 1821 aa23.96■■□□□ 1.43
CTDSP2-204ENST00000548823 CHMLP26374 656 aa23.96■■□□□ 1.43
CTDSP2-204ENST00000548823 TRIM32Q13049 653 aa23.96■■□□□ 1.43
CTDSP2-204ENST00000548823 LRRC24Q50LG9 513 aa23.96■■□□□ 1.43
CTDSP2-204ENST00000548823 TSHZ3Q63HK5 1081 aa23.96■■□□□ 1.43
CTDSP2-204ENST00000548823 ZFPM1Q8IX07 1006 aa23.96■■□□□ 1.43
CTDSP2-204ENST00000548823 USP40Q9NVE5 1235 aa23.96■■□□□ 1.43
CTDSP2-204ENST00000548823 SPTBN5Q9NRC6 3674 aaKnown RBP23.96■■□□□ 1.43
CTDSP2-204ENST00000548823 DOCK2Q92608 1830 aa23.96■■□□□ 1.43
CTDSP2-204ENST00000548823 TRIM6-TRIM34B2RNG4 842 aa23.95■■□□□ 1.42
CTDSP2-204ENST00000548823 AACSQ86V21 672 aa23.95■■□□□ 1.42
CTDSP2-204ENST00000548823 SNX21Q969T3 373 aa23.95■■□□□ 1.42
CTDSP2-204ENST00000548823 EAF2Q96CJ1 260 aaPredicted RBP23.95■■□□□ 1.42
CTDSP2-204ENST00000548823 ANP32EQ9BTT0 268 aa23.95■■□□□ 1.42
CTDSP2-204ENST00000548823 GPR108Q9NPR9 543 aa23.95■■□□□ 1.42
CTDSP2-204ENST00000548823 LAMA2P24043 3122 aaKnown RBP23.95■■□□□ 1.42
CTDSP2-204ENST00000548823 MYH13Q9UKX3 1938 aa23.95■■□□□ 1.42
CTDSP2-204ENST00000548823 TRIM75PA6NK02 468 aa23.94■■□□□ 1.42
CTDSP2-204ENST00000548823 CIAO1O76071 339 aa23.94■■□□□ 1.42
CTDSP2-204ENST00000548823 MDM2Q00987 491 aaPredicted RBP23.94■■□□□ 1.42
CTDSP2-204ENST00000548823 MAP3K10Q02779 954 aa23.94■■□□□ 1.42
CTDSP2-204ENST00000548823 DIXDC1Q155Q3 683 aa23.94■■□□□ 1.42
CTDSP2-204ENST00000548823 FAM161BQ96MY7 647 aa23.94■■□□□ 1.42
CTDSP2-204ENST00000548823 ESYT1Q9BSJ8 1104 aa23.94■■□□□ 1.42
CTDSP2-204ENST00000548823 CTNND1O60716 968 aaKnown RBP23.93■■□□□ 1.42
CTDSP2-204ENST00000548823 IFIT1P09914 478 aaKnown RBP23.93■■□□□ 1.42
CTDSP2-204ENST00000548823 GCLCP48506 637 aaPredicted RBP23.93■■□□□ 1.42
CTDSP2-204ENST00000548823 RILPL2Q969X0 211 aa23.93■■□□□ 1.42
CTDSP2-204ENST00000548823 KIF2CQ99661 725 aa23.93■■□□□ 1.42
CTDSP2-204ENST00000548823 SIL1Q9H173 461 aa23.93■■□□□ 1.42
CTDSP2-204ENST00000548823 DOCK1Q14185 1865 aa23.93■■□□□ 1.42
CTDSP2-204ENST00000548823 EYSQ5T1H1 3165 aa23.93■■□□□ 1.42
CTDSP2-204ENST00000548823 COL6A1P12109 1028 aa23.92■■□□□ 1.42
CTDSP2-204ENST00000548823 TREML2Q5T2D2 321 aa23.92■■□□□ 1.42
CTDSP2-204ENST00000548823 ZNF697Q5TEC3 545 aa23.92■■□□□ 1.42
CTDSP2-204ENST00000548823 KLHDC4Q8TBB5 520 aa23.92■■□□□ 1.42
CTDSP2-204ENST00000548823 TBC1D2Q9BYX2 928 aa23.92■■□□□ 1.42
CTDSP2-204ENST00000548823 ENTPD3O75355 529 aa23.91■■□□□ 1.42
CTDSP2-204ENST00000548823 IL15P40933 162 aaPredicted RBP23.91■■□□□ 1.42
CTDSP2-204ENST00000548823 MAP3K21Q5TCX8 1036 aa23.91■■□□□ 1.42
CTDSP2-204ENST00000548823 TRIB2Q92519 343 aa23.91■■□□□ 1.42
CTDSP2-204ENST00000548823 FGFR2P21802 821 aa23.91■■□□□ 1.42
CTDSP2-204ENST00000548823 PUM3Q15397 648 aaKnown RBP23.91■■□□□ 1.42
CTDSP2-204ENST00000548823 PROCA1Q8NCQ7 364 aaPredicted RBP23.91■■□□□ 1.42
CTDSP2-204ENST00000548823 IDI2Q9BXS1 227 aa23.91■■□□□ 1.42
CTDSP2-204ENST00000548823 PRDX5P30044 214 aa23.9■■□□□ 1.42
CTDSP2-204ENST00000548823 LRRC26Q2I0M4 334 aa23.9■■□□□ 1.42
CTDSP2-204ENST00000548823 TNNI3KQ59H18 835 aa23.9■■□□□ 1.42
CTDSP2-204ENST00000548823 ATG9AQ7Z3C6 839 aa23.9■■□□□ 1.42
CTDSP2-204ENST00000548823 FPGT-TNNI3KV9GXZ4 949 aa23.9■■□□□ 1.42
CTDSP2-204ENST00000548823 PLXNB2O15031 1838 aa23.89■■□□□ 1.42
CTDSP2-204ENST00000548823 EYA2O00167 538 aa23.89■■□□□ 1.41
CTDSP2-204ENST00000548823 PRKAR2AP13861 404 aaKnown RBP23.89■■□□□ 1.41
CTDSP2-204ENST00000548823 SLC4A3P48751 1232 aa23.89■■□□□ 1.41
CTDSP2-204ENST00000548823 ZSCAN29Q8IWY8 852 aaPredicted RBP23.89■■□□□ 1.41
CTDSP2-204ENST00000548823 IL27Q8NEV9 243 aa23.89■■□□□ 1.41
CTDSP2-204ENST00000548823 MAFAQ8NHW3 353 aaPredicted RBP23.89■■□□□ 1.41
CTDSP2-204ENST00000548823 EVI5LQ96CN4 794 aa23.89■■□□□ 1.41
CTDSP2-204ENST00000548823 CDX2Q99626 313 aaPredicted RBP23.89■■□□□ 1.41
CTDSP2-204ENST00000548823 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.89■■□□□ 1.41
CTDSP2-204ENST00000548823 PRUNE2Q8WUY3 3088 aa23.88■■□□□ 1.41
CTDSP2-204ENST00000548823 LDHBP07195 334 aaKnown RBP23.88■■□□□ 1.41
CTDSP2-204ENST00000548823 TFCP2Q12800 502 aa23.88■■□□□ 1.41
CTDSP2-204ENST00000548823 PABPC4Q13310 644 aaKnown RBP eCLIP23.88■■□□□ 1.41
CTDSP2-204ENST00000548823 SH3BP5LQ7L8J4 393 aa23.88■■□□□ 1.41
CTDSP2-204ENST00000548823 ATP5JP18859 108 aa23.87■■□□□ 1.41
CTDSP2-204ENST00000548823 RABEP1Q15276 862 aa23.87■■□□□ 1.41
CTDSP2-204ENST00000548823 SYMPKQ92797 1274 aaKnown RBP23.87■■□□□ 1.41
CTDSP2-204ENST00000548823 IL17RAQ96F46 866 aa23.87■■□□□ 1.41
CTDSP2-204ENST00000548823 LBHD1Q9BQE6 289 aaPredicted RBP23.87■■□□□ 1.41
CTDSP2-204ENST00000548823 CCDC8Q9H0W5 538 aaPredicted RBP23.87■■□□□ 1.41
CTDSP2-204ENST00000548823 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.87■■□□□ 1.41
CTDSP2-204ENST00000548823 HIP1O00291 1037 aa23.86■■□□□ 1.41
CTDSP2-204ENST00000548823 XRCC5P13010 732 aaKnown RBP23.86■■□□□ 1.41
CTDSP2-204ENST00000548823 CYP2B6P20813 491 aa23.86■■□□□ 1.41
CTDSP2-204ENST00000548823 CCDC84Q86UT8 332 aaPredicted RBP23.86■■□□□ 1.41
CTDSP2-204ENST00000548823 TICAM2Q86XR7 235 aa23.86■■□□□ 1.41
CTDSP2-204ENST00000548823 LOC285556D6RIA3 1793 aa23.85■■□□□ 1.41
CTDSP2-204ENST00000548823 DDTLA6NHG4 134 aaPredicted RBP23.85■■□□□ 1.41
CTDSP2-204ENST00000548823 SLC5A1P13866 664 aa23.85■■□□□ 1.41
CTDSP2-204ENST00000548823 HSCBQ8IWL3 235 aa23.85■■□□□ 1.41
CTDSP2-204ENST00000548823 TRMT44Q8IYL2 757 aaKnown RBP23.85■■□□□ 1.41
CTDSP2-204ENST00000548823 RUFY2Q8WXA3 655 aa23.85■■□□□ 1.41
CTDSP2-204ENST00000548823 SLURP2P0DP57 97 aa23.84■■□□□ 1.41
CTDSP2-204ENST00000548823 LHX8Q68G74 356 aa23.84■■□□□ 1.41
CTDSP2-204ENST00000548823 LPIN2Q92539 896 aa23.84■■□□□ 1.41
CTDSP2-204ENST00000548823 NUDT12Q9BQG2 462 aa23.84■■□□□ 1.41
CTDSP2-204ENST00000548823 ASCC2Q9H1I8 757 aaPredicted RBP23.84■■□□□ 1.41
CTDSP2-204ENST00000548823 SEMA6BQ9H3T3 888 aa23.84■■□□□ 1.41
CTDSP2-204ENST00000548823 MORF4L1Q9UBU8 362 aa23.84■■□□□ 1.41
CTDSP2-204ENST00000548823 MYH2Q9UKX2 1941 aa23.84■■□□□ 1.41
CTDSP2-204ENST00000548823 RFX7Q2KHR2 1363 aa23.83■■□□□ 1.41
CTDSP2-204ENST00000548823 SALL1Q9NSC2 1324 aa23.83■■□□□ 1.41
CTDSP2-204ENST00000548823 SGSM2O43147 1006 aa23.83■■□□□ 1.41
CTDSP2-204ENST00000548823 ANAPC15P60006 121 aa23.83■■□□□ 1.41
CTDSP2-204ENST00000548823 SPP2Q13103 211 aa23.83■■□□□ 1.41
CTDSP2-204ENST00000548823 DBNLQ9UJU6 430 aaKnown RBP23.83■■□□□ 1.41
CTDSP2-204ENST00000548823 DNAH12Q6ZR08 3092 aa23.82■■□□□ 1.4
CTDSP2-204ENST00000548823 TBC1D12O60347 775 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms