RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 EOMESO95936 686 aa6.91□□□□□ -1.3
SCAF11-210ENST00000547654 GSTT1P30711 240 aa6.91□□□□□ -1.3
SCAF11-210ENST00000547654 TMEM67Q5HYA8 995 aa6.91□□□□□ -1.3
SCAF11-210ENST00000547654 SYDE1Q6ZW31 735 aaPredicted RBP6.91□□□□□ -1.3
SCAF11-210ENST00000547654 ANKLE2Q86XL3 938 aa6.91□□□□□ -1.3
SCAF11-210ENST00000547654 LRRC56Q8IYG6 542 aaPredicted RBP6.91□□□□□ -1.3
SCAF11-210ENST00000547654 GRIN3AQ8TCU5 1115 aa6.91□□□□□ -1.3
SCAF11-210ENST00000547654 C12orf49Q9H741 205 aa6.91□□□□□ -1.3
SCAF11-210ENST00000547654 PPM1HQ9ULR3 514 aa6.91□□□□□ -1.3
SCAF11-210ENST00000547654 TPX2Q9ULW0 747 aaKnown RBP6.91□□□□□ -1.3
SCAF11-210ENST00000547654 LRIG2O94898 1065 aa6.9□□□□□ -1.3
SCAF11-210ENST00000547654 LDHBP07195 334 aaKnown RBP6.9□□□□□ -1.3
SCAF11-210ENST00000547654 CFPP27918 469 aa6.9□□□□□ -1.3
SCAF11-210ENST00000547654 LRRC14Q15048 493 aa6.9□□□□□ -1.3
SCAF11-210ENST00000547654 PRR23BQ6ZRT6 265 aa6.9□□□□□ -1.3
SCAF11-210ENST00000547654 MFSD4AQ8N468 514 aa6.9□□□□□ -1.3
SCAF11-210ENST00000547654 ATP13A1Q9HD20 1204 aa6.9□□□□□ -1.3
SCAF11-210ENST00000547654 PRAMEF27A3QJZ7 478 aa6.89□□□□□ -1.31
SCAF11-210ENST00000547654 PRPF40AO75400 957 aaKnown RBP6.89□□□□□ -1.31
SCAF11-210ENST00000547654 FBXO24O75426 580 aa6.89□□□□□ -1.31
SCAF11-210ENST00000547654 RBM25P49756 843 aaKnown RBP6.89□□□□□ -1.31
SCAF11-210ENST00000547654 CDKAL1Q5VV42 579 aa6.89□□□□□ -1.31
SCAF11-210ENST00000547654 ZNF507Q8TCN5 953 aa6.89□□□□□ -1.31
SCAF11-210ENST00000547654 HSPA12BQ96MM6 686 aa6.89□□□□□ -1.31
SCAF11-210ENST00000547654 H3BS24 57 aa6.88□□□□□ -1.31
SCAF11-210ENST00000547654 NFIBO00712 420 aa6.88□□□□□ -1.31
SCAF11-210ENST00000547654 GNA15P30679 374 aa6.88□□□□□ -1.31
SCAF11-210ENST00000547654 SFRP5Q5T4F7 317 aa6.88□□□□□ -1.31
SCAF11-210ENST00000547654 CILP2Q8IUL8 1156 aa6.88□□□□□ -1.31
SCAF11-210ENST00000547654 MIPEPQ99797 713 aa6.88□□□□□ -1.31
SCAF11-210ENST00000547654 SLITRK5O94991 958 aa6.87□□□□□ -1.31
SCAF11-210ENST00000547654 CTSHP09668 335 aa6.87□□□□□ -1.31
SCAF11-210ENST00000547654 USP17L7P0C7H9 530 aa6.87□□□□□ -1.31
SCAF11-210ENST00000547654 GDNFP39905 211 aa6.87□□□□□ -1.31
SCAF11-210ENST00000547654 FGD1P98174 961 aa6.87□□□□□ -1.31
SCAF11-210ENST00000547654 TAGLNQ01995 201 aaKnown RBP6.87□□□□□ -1.31
SCAF11-210ENST00000547654 PTPN11Q06124 597 aaPredicted RBP6.87□□□□□ -1.31
SCAF11-210ENST00000547654 SCARA3Q6AZY7 606 aa6.87□□□□□ -1.31
SCAF11-210ENST00000547654 CCDC120Q96HB5 630 aa6.87□□□□□ -1.31
SCAF11-210ENST00000547654 DIRC2Q96SL1 478 aa6.87□□□□□ -1.31
SCAF11-210ENST00000547654 NSUN3Q9H649 340 aaKnown RBP6.87□□□□□ -1.31
SCAF11-210ENST00000547654 FAM8A1Q9UBU6 413 aa6.87□□□□□ -1.31
SCAF11-210ENST00000547654 AK5Q9Y6K8 562 aa6.87□□□□□ -1.31
SCAF11-210ENST00000547654 PRR33A8MZF0 331 aa6.86□□□□□ -1.31
SCAF11-210ENST00000547654 CELA3AP09093 270 aa6.86□□□□□ -1.31
SCAF11-210ENST00000547654 ZSCAN22P10073 491 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-210ENST00000547654 ZNF746Q6NUN9 644 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-210ENST00000547654 C22orf34Q6ZV56 151 aa6.86□□□□□ -1.31
SCAF11-210ENST00000547654 FBXO15Q8NCQ5 510 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-210ENST00000547654 GAL3ST3Q96A11 431 aa6.86□□□□□ -1.31
SCAF11-210ENST00000547654 FRMD6Q96NE9 622 aa6.86□□□□□ -1.31
SCAF11-210ENST00000547654 DUSP9Q99956 384 aaKnown RBP6.86□□□□□ -1.31
SCAF11-210ENST00000547654 SEMA3GQ9NS98 782 aa6.86□□□□□ -1.31
SCAF11-210ENST00000547654 ZNF865P0CJ78 1059 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-210ENST00000547654 RAC2P15153 192 aa6.85□□□□□ -1.31
SCAF11-210ENST00000547654 DAB2P98082 770 aa6.85□□□□□ -1.31
SCAF11-210ENST00000547654 LCNL1Q6ZST4 164 aa6.85□□□□□ -1.31
SCAF11-210ENST00000547654 C1QL4Q86Z23 238 aa6.85□□□□□ -1.31
SCAF11-210ENST00000547654 C19orf73Q9NVV2 129 aa6.85□□□□□ -1.31
SCAF11-210ENST00000547654 C1QTNF9P0C862 333 aa6.84□□□□□ -1.31
SCAF11-210ENST00000547654 ETF1P62495 437 aaKnown RBP6.84□□□□□ -1.31
SCAF11-210ENST00000547654 PCNX4Q63HM2 1172 aa6.84□□□□□ -1.31
SCAF11-210ENST00000547654 LRFN4Q6PJG9 635 aa6.84□□□□□ -1.31
SCAF11-210ENST00000547654 HDXQ7Z353 690 aa6.84□□□□□ -1.31
SCAF11-210ENST00000547654 THAP5Q7Z6K1 395 aa6.84□□□□□ -1.31
SCAF11-210ENST00000547654 ALPK1Q96QP1 1244 aa6.84□□□□□ -1.31
SCAF11-210ENST00000547654 EPB41L4BQ9H329 900 aa6.84□□□□□ -1.31
SCAF11-210ENST00000547654 FBRSQ9HAH7 460 aa6.84□□□□□ -1.31
SCAF11-210ENST00000547654 SLAMF8Q9P0V8 285 aa6.84□□□□□ -1.31
SCAF11-210ENST00000547654 CYP8B1Q9UNU6 501 aa6.84□□□□□ -1.31
SCAF11-210ENST00000547654 SPG7Q9UQ90 795 aa6.84□□□□□ -1.31
SCAF11-210ENST00000547654 CAPN6Q9Y6Q1 641 aa6.84□□□□□ -1.31
SCAF11-210ENST00000547654 CBX7O95931 251 aa6.83□□□□□ -1.32
SCAF11-210ENST00000547654 LILRA6Q6PI73 481 aa6.83□□□□□ -1.32
SCAF11-210ENST00000547654 SIAH1Q8IUQ4 282 aa6.83□□□□□ -1.32
SCAF11-210ENST00000547654 MFSD2AQ8NA29 543 aa6.83□□□□□ -1.32
SCAF11-210ENST00000547654 PLPPR2Q96GM1 343 aa6.83□□□□□ -1.32
SCAF11-210ENST00000547654 TMEM253P0C7T8 217 aa6.82□□□□□ -1.32
SCAF11-210ENST00000547654 ATP2B2Q01814 1243 aa6.82□□□□□ -1.32
SCAF11-210ENST00000547654 SLBPQ14493 270 aaKnown RBP eCLIP6.82□□□□□ -1.32
SCAF11-210ENST00000547654 INPP5AQ14642 412 aa6.82□□□□□ -1.32
SCAF11-210ENST00000547654 LETMD1Q6P1Q0 360 aa6.82□□□□□ -1.32
SCAF11-210ENST00000547654 SV2BQ7L1I2 683 aa6.82□□□□□ -1.32
SCAF11-210ENST00000547654 TMC4Q7Z404 712 aa6.82□□□□□ -1.32
SCAF11-210ENST00000547654 ABHD4Q8TB40 342 aa6.82□□□□□ -1.32
SCAF11-210ENST00000547654 KRTAP9-3Q9BYQ3 159 aa6.82□□□□□ -1.32
SCAF11-210ENST00000547654 WNT10AQ9GZT5 417 aa6.82□□□□□ -1.32
SCAF11-210ENST00000547654 DCP1AQ9NPI6 582 aaPredicted RBP6.82□□□□□ -1.32
SCAF11-210ENST00000547654 PARP2Q9UGN5 583 aa6.82□□□□□ -1.32
SCAF11-210ENST00000547654 NPIPB6E9PJ23 425 aa6.81□□□□□ -1.32
SCAF11-210ENST00000547654 E9PSI1 815 aa6.81□□□□□ -1.32
SCAF11-210ENST00000547654 CYP7A1P22680 504 aa6.81□□□□□ -1.32
SCAF11-210ENST00000547654 EAPPQ56P03 285 aaPredicted RBP6.81□□□□□ -1.32
SCAF11-210ENST00000547654 WIPI1Q5MNZ9 446 aaPredicted RBP6.81□□□□□ -1.32
SCAF11-210ENST00000547654 TTC6Q86TZ1 520 aa6.81□□□□□ -1.32
SCAF11-210ENST00000547654 HID1Q8IV36 788 aa6.81□□□□□ -1.32
SCAF11-210ENST00000547654 XAGE3Q8WTP9 111 aa6.81□□□□□ -1.32
SCAF11-210ENST00000547654 UBE2FQ969M7 185 aa6.81□□□□□ -1.32
SCAF11-210ENST00000547654 ZSWIM5Q9P217 1185 aa6.81□□□□□ -1.32
SCAF11-210ENST00000547654 ST14Q9Y5Y6 855 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms