RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 GRAMD1CQ8IYS0 662 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 AIDAQ96BJ3 306 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 ZCWPW1Q9H0M4 648 aa13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 U3KPZ7 1027 aaPredicted RBP13.43□□□□□ -0.26
RBFOX1-208ENST00000547372 NEDD4P46934 1319 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 CHD2O14647 1828 aaKnown RBP13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 A0A0G2JS52 829 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 FSBPO95073 299 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 DNA2P51530 1060 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 SMTNP53814 917 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 SAFBQ15424 915 aaKnown RBP eCLIP13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 VIPAS39Q9H9C1 493 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 SNRKQ9NRH2 765 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 TPX2Q9ULW0 747 aaKnown RBP13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 NEXMIFQ5QGS0 1516 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 HSF2BPO75031 334 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 RXRAP19793 462 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 MCM3P25205 808 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 FMR1Q06787 632 aaKnown RBP eCLIP13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 GNPTABQ3T906 1256 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 NAA35Q5VZE5 725 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 CCDC102BQ68D86 513 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 LMBR1Q8WVP7 490 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 TLR7Q9NYK1 1049 aaKnown RBP13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 OPA1O60313 960 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 CLTAP09496 248 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 ADCY2Q08462 1091 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 NNTQ13423 1086 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 C11orf91Q3C1V1 193 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 CCDC26Q8TAB7 109 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 CCDC85AQ96PX6 553 aaPredicted RBP13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 NBPF3Q9H094 633 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 C19orf44Q9H6X5 657 aa13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 GPHNQ9NQX3 736 aaPredicted RBP13.42□□□□□ -0.26
RBFOX1-208ENST00000547372 GRIN2DO15399 1336 aa13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 SHOX2O60902 331 aaPredicted RBP13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 KIAA1328Q86T90 577 aa13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 NSMCE1Q8WV22 266 aa13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 TCP11Q8WWU5 503 aa13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 TEX13AQ9BXU3 409 aaPredicted RBP13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 SAR1BQ9Y6B6 198 aa13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 ALDH1L1O75891 902 aa13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 TBX2Q13207 712 aaPredicted RBP13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 PPP1R7Q15435 360 aa13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 RRP12Q5JTH9 1297 aaKnown RBP13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 CAPRIN2Q6IMN6 1127 aaKnown RBP13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 WDR93Q6P2C0 686 aa13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 EAF2Q96CJ1 260 aaPredicted RBP13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 FAM167BQ9BTA0 163 aa13.41□□□□□ -0.26
RBFOX1-208ENST00000547372 KLF18A0A0U1RQI7 1052 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 CYP21A2P08686 494 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 TUBB2AQ13885 445 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 EZH2Q15910 746 aaKnown RBP13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 ODF2Q5BJF6 829 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 ANO1Q5XXA6 986 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 ARHGEF25Q86VW2 580 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 GPIHBP1Q8IV16 184 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 ABTB2Q8N961 1025 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 ZNF473Q8WTR7 871 aaKnown RBP13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 RNPC3Q96LT9 517 aaKnown RBP13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 CCT8L2Q96SF2 557 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 TUBB2BQ9BVA1 445 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 VCPKMTQ9H867 229 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 MED23Q9ULK4 1368 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 YEATS4O95619 227 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 ATP1A1P05023 1023 aaKnown RBP13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 MSL1Q68DK7 614 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 HIBCHQ6NVY1 386 aaPredicted RBP13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 ZNF530Q6P9A1 599 aaPredicted RBP13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 FOXP4Q8IVH2 680 aaPredicted RBP13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 HDAC7Q8WUI4 952 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 IFT81Q8WYA0 676 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 L3MBTL1Q9Y468 752 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 LSP1P33241 339 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 MYSM1Q5VVJ2 828 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 CCNI2Q6ZMN8 369 aaPredicted RBP13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 MAP3K19Q56UN5 1328 aa13.4□□□□□ -0.26
RBFOX1-208ENST00000547372 CMA1P23946 247 aa13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 MRPL12P52815 198 aaKnown RBP13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 RWDD2BP57060 319 aa13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 PPARAQ07869 468 aa13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 CCDC122Q5T0U0 273 aa13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 STAMBPL1Q96FJ0 436 aa13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 EYA1Q99502 592 aa13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 BIN2Q9UBW5 565 aaPredicted RBP13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 PIP4K2AP48426 406 aaPredicted RBP13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 DHX32Q7L7V1 743 aaKnown RBP13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 FUKQ8N0W3 1084 aa13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 MACROD2A1Z1Q3 448 aa13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 ANKRD18BA2A2Z9 1011 aa13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 RTN2O75298 545 aa13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 SNUPNO95149 360 aaKnown RBP13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 MICU3Q86XE3 530 aa13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 VPS16Q9H269 839 aa13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 TTF2Q9UNY4 1162 aaKnown RBP13.39□□□□□ -0.27
RBFOX1-208ENST00000547372 GOLGA8KD6RF30 607 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 AFMP43652 599 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms