RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 THSD7AQ9UPZ6 1657 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
NPAS3-205ENST00000547068 TFCP2Q12800 502 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 MAP9Q49MG5 647 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 RESP18Q5W5W9 173 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 KBTBD3Q8NAB2 608 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 ENOX1Q8TC92 643 aaKnown RBP12.14□□□□□ -0.47
NPAS3-205ENST00000547068 DACH1Q9UI36 760 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 CDHR2Q9BYE9 1310 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 MRC1P22897 1456 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 FAM237AA0A1B0GTK4 181 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 CCDC196A0A1B0GTZ2 297 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 FOXN1O15353 648 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 HSPD1P10809 573 aaKnown RBP12.13□□□□□ -0.47
NPAS3-205ENST00000547068 RBL2Q08999 1139 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 FBXW10Q5XX13 1052 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 TTC5Q8N0Z6 440 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 HELLSQ9NRZ9 838 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 SAMSN1Q9NSI8 373 aaKnown RBP12.13□□□□□ -0.47
NPAS3-205ENST00000547068 KCNH3Q9ULD8 1083 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 HPCAL4Q9UM19 191 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 TTF2Q9UNY4 1162 aaKnown RBP12.13□□□□□ -0.47
NPAS3-205ENST00000547068 ADAMTS7Q9UKP4 1686 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 GOLGA8BA8MQT2 603 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 SHOX2O60902 331 aaPredicted RBP12.13□□□□□ -0.47
NPAS3-205ENST00000547068 NCAPH2Q6IBW4 605 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 POTEAQ6S8J7 498 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 KRT27Q7Z3Y8 459 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 RIN2Q8WYP3 895 aaPredicted RBP12.13□□□□□ -0.47
NPAS3-205ENST00000547068 DBNDD2Q9BQY9 259 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 MAN1B1Q9UKM7 699 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 MYO6Q9UM54 1294 aa12.13□□□□□ -0.47
NPAS3-205ENST00000547068 KLF18A0A0U1RQI7 1052 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 A0A1B0GTH6 734 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 AIMP1Q12904 312 aaKnown RBP12.12□□□□□ -0.47
NPAS3-205ENST00000547068 STIM1Q13586 685 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 PTPAQ15257 358 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 RAB11FIP4Q86YS3 637 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 FBXL16Q8N461 479 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 MLKLQ8NB16 471 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 FAM76AQ8TAV0 307 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 SUFUQ9UMX1 484 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 TEX33O43247 280 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
NPAS3-205ENST00000547068 MCM3P25205 808 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 KCNV1Q6PIU1 500 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 ACSBG1Q96GR2 724 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 KAT14Q9H8E8 782 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 TAOK2Q9UL54 1235 aa12.12□□□□□ -0.47
NPAS3-205ENST00000547068 KIF1CO43896 1103 aaKnown RBP12.11□□□□□ -0.47
NPAS3-205ENST00000547068 INPP5BP32019 993 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 GGCXP38435 758 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 IRAK1P51617 712 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 ZNF827Q17R98 1081 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 ZNF790Q6PG37 636 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 EP400NLQ6ZTU2 488 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 VPS37DQ86XT2 251 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 POTEDQ86YR6 584 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 COG1Q8WTW3 980 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 ZNF622Q969S3 477 aaKnown RBP eCLIP12.11□□□□□ -0.47
NPAS3-205ENST00000547068 CRACR2AQ9BSW2 395 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 KDM3BQ7LBC6 1761 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 GOLIM4O00461 696 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 ABL1P00519 1130 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 USP14P54578 494 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 MDM2Q00987 491 aaPredicted RBP12.11□□□□□ -0.47
NPAS3-205ENST00000547068 SETQ01105 290 aaPredicted RBP12.11□□□□□ -0.47
NPAS3-205ENST00000547068 POSTNQ15063 836 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 COPRSQ9NQ92 184 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 MYO1AQ9UBC5 1043 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
NPAS3-205ENST00000547068 SHTN1A0MZ66 631 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 GOLGA6CA6NDK9 693 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 MFAP3LO75121 409 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 GOLGA6DP0CG33 693 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 CASP14P31944 242 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 SLC39A6Q13433 755 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 EPHA10Q5JZY3 1008 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 BCAS4Q8TDM0 211 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 GDAP1L1Q96MZ0 367 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 GOLGA6AQ9NYA3 693 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 ZC3H4Q9UPT8 1303 aaKnown RBP12.1□□□□□ -0.47
NPAS3-205ENST00000547068 AMPD2Q01433 879 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 SPECC1Q5M775 1068 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 TTC39AQ5SRH9 613 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 FAM182BQ5T319 152 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 SLC9C2Q5TAH2 1124 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 FAM196AQ6ZSG2 479 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 CNGA4Q8IV77 575 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 PIGBQ92521 554 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 MED15Q96RN5 788 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 MAP3K14Q99558 947 aa12.1□□□□□ -0.47
NPAS3-205ENST00000547068 PALLDQ8WX93 1383 aa12.09□□□□□ -0.47
NPAS3-205ENST00000547068 PRC1O43663 620 aa12.09□□□□□ -0.47
NPAS3-205ENST00000547068 IGKV5-2P06315 115 aa12.09□□□□□ -0.47
NPAS3-205ENST00000547068 MORC3Q14149 939 aa12.09□□□□□ -0.47
NPAS3-205ENST00000547068 ZMYM1Q5SVZ6 1142 aa12.09□□□□□ -0.47
NPAS3-205ENST00000547068 RIC3Q7Z5B4 369 aa12.09□□□□□ -0.47
NPAS3-205ENST00000547068 RPAINQ86UA6 219 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms