RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 FEZ1Q99689 392 aa20.81■□□□□ 0.92
CD9-211ENST00000546073 WBP1LQ9NX94 342 aa20.81■□□□□ 0.92
CD9-211ENST00000546073 TMOD4Q9NZQ9 345 aa20.81■□□□□ 0.92
CD9-211ENST00000546073 GH2P01242 217 aa20.8■□□□□ 0.92
CD9-211ENST00000546073 CYP2D6P10635 497 aa20.8■□□□□ 0.92
CD9-211ENST00000546073 CDK8P49336 464 aa20.8■□□□□ 0.92
CD9-211ENST00000546073 CTCFP49711 727 aaPredicted RBP20.8■□□□□ 0.92
CD9-211ENST00000546073 C16orf86Q6ZW13 317 aa20.8■□□□□ 0.92
CD9-211ENST00000546073 ZNF280CQ8ND82 737 aa20.8■□□□□ 0.92
CD9-211ENST00000546073 SAGE1Q9NXZ1 904 aa20.8■□□□□ 0.92
CD9-211ENST00000546073 TRIM75PA6NK02 468 aa20.79■□□□□ 0.92
CD9-211ENST00000546073 HSPD1P10809 573 aaKnown RBP20.79■□□□□ 0.92
CD9-211ENST00000546073 PPARAQ07869 468 aa20.79■□□□□ 0.92
CD9-211ENST00000546073 PABPC4Q13310 644 aaKnown RBP eCLIP20.79■□□□□ 0.92
CD9-211ENST00000546073 ALX1Q15699 326 aa20.79■□□□□ 0.92
CD9-211ENST00000546073 PPP4R3BQ5MIZ7 849 aa20.79■□□□□ 0.92
CD9-211ENST00000546073 TMEM179Q6ZVK1 233 aa20.79■□□□□ 0.92
CD9-211ENST00000546073 DYNLL2Q96FJ2 89 aa20.79■□□□□ 0.92
CD9-211ENST00000546073 SH2D4AQ9H788 454 aa20.79■□□□□ 0.92
CD9-211ENST00000546073 TOMM22Q9NS69 142 aa20.79■□□□□ 0.92
CD9-211ENST00000546073 ZBTB21Q9ULJ3 1066 aa20.79■□□□□ 0.92
CD9-211ENST00000546073 MYH7P12883 1935 aa20.78■□□□□ 0.92
CD9-211ENST00000546073 CYP2D7A0A087X1C5 515 aa20.78■□□□□ 0.92
CD9-211ENST00000546073 C19orf81C9J6K1 198 aa20.78■□□□□ 0.92
CD9-211ENST00000546073 ZNF213O14771 459 aa20.78■□□□□ 0.92
CD9-211ENST00000546073 TRPA1O75762 1119 aa20.78■□□□□ 0.92
CD9-211ENST00000546073 CHMLP26374 656 aa20.78■□□□□ 0.92
CD9-211ENST00000546073 GABPAQ06546 454 aa20.78■□□□□ 0.92
CD9-211ENST00000546073 SPP2Q13103 211 aa20.78■□□□□ 0.92
CD9-211ENST00000546073 GADL1Q6ZQY3 521 aa20.78■□□□□ 0.92
CD9-211ENST00000546073 IFNL1Q8IU54 200 aa20.78■□□□□ 0.92
CD9-211ENST00000546073 STK11IPQ8N1F8 1099 aa20.78■□□□□ 0.92
CD9-211ENST00000546073 CNKSR2Q8WXI2 1034 aa20.78■□□□□ 0.92
CD9-211ENST00000546073 RNF41Q9H4P4 317 aaPredicted RBP20.78■□□□□ 0.92
CD9-211ENST00000546073 ARHGEF10LQ9HCE6 1279 aa20.78■□□□□ 0.92
CD9-211ENST00000546073 USP17L10C9JJH3 530 aa20.77■□□□□ 0.92
CD9-211ENST00000546073 SHMT1P34896 483 aa20.77■□□□□ 0.92
CD9-211ENST00000546073 USP14P54578 494 aa20.77■□□□□ 0.92
CD9-211ENST00000546073 IMMTQ16891 758 aaKnown RBP20.77■□□□□ 0.92
CD9-211ENST00000546073 DSCC1Q9BVC3 393 aa20.77■□□□□ 0.92
CD9-211ENST00000546073 DNAJC18Q9H819 358 aa20.77■□□□□ 0.92
CD9-211ENST00000546073 ZFYVE28Q9HCC9 887 aa20.77■□□□□ 0.92
CD9-211ENST00000546073 ZCCHC17Q9NP64 241 aaKnown RBP20.77■□□□□ 0.92
CD9-211ENST00000546073 RNF186Q9NXI6 227 aa20.77■□□□□ 0.92
CD9-211ENST00000546073 KCNH4Q9UQ05 1017 aa20.77■□□□□ 0.92
CD9-211ENST00000546073 AFG3L2Q9Y4W6 797 aa20.77■□□□□ 0.92
CD9-211ENST00000546073 FGAP02671 866 aa20.76■□□□□ 0.91
CD9-211ENST00000546073 SLURP2P0DP57 97 aa20.76■□□□□ 0.91
CD9-211ENST00000546073 PCP11498 1178 aaKnown RBP20.76■□□□□ 0.91
CD9-211ENST00000546073 GJA5P36382 358 aa20.76■□□□□ 0.91
CD9-211ENST00000546073 ZNF589Q86UQ0 364 aaPredicted RBP20.76■□□□□ 0.91
CD9-211ENST00000546073 ZIC5Q96T25 663 aa20.76■□□□□ 0.91
CD9-211ENST00000546073 WDR18Q9BV38 432 aa20.76■□□□□ 0.91
CD9-211ENST00000546073 TESPA1A2RU30 521 aaPredicted RBP20.75■□□□□ 0.91
CD9-211ENST00000546073 CDC45O75419 566 aa20.75■□□□□ 0.91
CD9-211ENST00000546073 TSPY3P0CV98 308 aa20.75■□□□□ 0.91
CD9-211ENST00000546073 TSPY8P0CW00 308 aa20.75■□□□□ 0.91
CD9-211ENST00000546073 MS4A4AQ96JQ5 239 aa20.75■□□□□ 0.91
CD9-211ENST00000546073 KANSL2Q9H9L4 492 aa20.75■□□□□ 0.91
CD9-211ENST00000546073 EPB41L4AQ9HCS5 686 aaPredicted RBP20.75■□□□□ 0.91
CD9-211ENST00000546073 PNMA3Q9UL41 463 aa20.75■□□□□ 0.91
CD9-211ENST00000546073 ZMYM6O95789 1325 aa20.75■□□□□ 0.91
CD9-211ENST00000546073 OSBPP22059 807 aa20.74■□□□□ 0.91
CD9-211ENST00000546073 NT5C2P49902 561 aa20.74■□□□□ 0.91
CD9-211ENST00000546073 ATP2B2Q01814 1243 aa20.74■□□□□ 0.91
CD9-211ENST00000546073 TAF1CQ15572 869 aaPredicted RBP20.74■□□□□ 0.91
CD9-211ENST00000546073 VPS53Q5VIR6 699 aa20.74■□□□□ 0.91
CD9-211ENST00000546073 USP17L2Q6R6M4 530 aa20.74■□□□□ 0.91
CD9-211ENST00000546073 MFSD6Q6ZSS7 791 aa20.74■□□□□ 0.91
CD9-211ENST00000546073 ANKRD23Q86SG2 305 aa20.74■□□□□ 0.91
CD9-211ENST00000546073 SLC44A5Q8NCS7 719 aa20.74■□□□□ 0.91
CD9-211ENST00000546073 MYH1P12882 1939 aa20.73■□□□□ 0.91
CD9-211ENST00000546073 A0A0G2JLL6 359 aaPredicted RBP20.73■□□□□ 0.91
CD9-211ENST00000546073 TSPY2A6NKD2 308 aa20.73■□□□□ 0.91
CD9-211ENST00000546073 EIF5BO60841 1220 aaKnown RBP20.73■□□□□ 0.91
CD9-211ENST00000546073 BACE1P56817 501 aa20.73■□□□□ 0.91
CD9-211ENST00000546073 ICA1Q05084 483 aa20.73■□□□□ 0.91
CD9-211ENST00000546073 ARHGEF6Q15052 776 aa20.73■□□□□ 0.91
CD9-211ENST00000546073 PRRT2Q7Z6L0 340 aaPredicted RBP20.73■□□□□ 0.91
CD9-211ENST00000546073 PROCA1Q8NCQ7 364 aaPredicted RBP20.73■□□□□ 0.91
CD9-211ENST00000546073 BRI3BPQ8WY22 251 aa20.73■□□□□ 0.91
CD9-211ENST00000546073 U3KPZ7 1027 aaPredicted RBP20.73■□□□□ 0.91
CD9-211ENST00000546073 NAV1Q8NEY1 1877 aa20.73■□□□□ 0.91
CD9-211ENST00000546073 RANBP6O60518 1105 aaKnown RBP20.72■□□□□ 0.91
CD9-211ENST00000546073 TRDNQ13061 729 aa20.72■□□□□ 0.91
CD9-211ENST00000546073 MTMR2Q13614 643 aa20.72■□□□□ 0.91
CD9-211ENST00000546073 SEPT2Q15019 361 aa20.72■□□□□ 0.91
CD9-211ENST00000546073 PARK7Q99497 189 aaKnown RBP20.72■□□□□ 0.91
CD9-211ENST00000546073 ANAPC4Q9UJX5 808 aa20.72■□□□□ 0.91
CD9-211ENST00000546073 ROBO3Q96MS0 1386 aa20.72■□□□□ 0.91
CD9-211ENST00000546073 FOCADQ5VW36 1801 aa20.71■□□□□ 0.91
CD9-211ENST00000546073 PDHXO00330 501 aa20.71■□□□□ 0.91
CD9-211ENST00000546073 FOXN1O15353 648 aa20.71■□□□□ 0.91
CD9-211ENST00000546073 SGSM2O43147 1006 aa20.71■□□□□ 0.91
CD9-211ENST00000546073 RAD21O60216 631 aa20.71■□□□□ 0.91
CD9-211ENST00000546073 AKR1B1P15121 316 aa20.71■□□□□ 0.91
CD9-211ENST00000546073 HMGCS2P54868 508 aa20.71■□□□□ 0.91
CD9-211ENST00000546073 CTDSPL2Q05D32 466 aa20.71■□□□□ 0.91
CD9-211ENST00000546073 RRP1BQ14684 758 aaKnown RBP20.71■□□□□ 0.91
CD9-211ENST00000546073 RRP12Q5JTH9 1297 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms