RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 CYP27C1Q4G0S4 372 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 DUSP27Q5VZP5 1158 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 ARMCX6Q7L4S7 300 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 VPS37DQ86XT2 251 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 ACSF2Q96CM8 615 aaPredicted RBP3.82□□□□□ -1.8
YBX3-214ENST00000544501 TMEM87BQ96K49 555 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 MFSD14AQ96MC6 490 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 DUSP23Q9BVJ7 150 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 PRDM10Q9NQV6 1147 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 ATG3Q9NT62 314 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 GMIPQ9P107 970 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 REV1Q9UBZ9 1251 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 CORINQ9Y5Q5 1042 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 MEIS3P2A8K0S8 358 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 ADAM23O75077 832 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 F13BP05160 661 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 ADMP35318 185 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 CLCQ05315 142 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 CDK5R2Q13319 367 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 ZNF746Q6NUN9 644 aaPredicted RBP3.81□□□□□ -1.8
YBX3-214ENST00000544501 GK5Q6ZS86 529 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 UBE3DQ7Z6J8 389 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 ZDHHC13Q8IUH4 622 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 FBXL6Q8N531 539 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 SLC43A3Q8NBI5 491 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 SHKBP1Q8TBC3 707 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 C8orf37Q96NL8 207 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 LGR6Q9HBX8 967 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 CAPN10Q9HC96 672 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 STRIP2Q9ULQ0 834 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 ZNRF3Q9ULT6 936 aa3.81□□□□□ -1.8
YBX3-214ENST00000544501 SLC22A31A6NKX4 558 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 WDR64B1ANS9 1081 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 IGF2BP3O00425 579 aaKnown RBP eCLIP3.8□□□□□ -1.8
YBX3-214ENST00000544501 FAM87AP0C7U9 286 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 ATF4P18848 351 aaPredicted RBP3.8□□□□□ -1.8
YBX3-214ENST00000544501 ITGB7P26010 798 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 CCNFP41002 786 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 TNNI2P48788 182 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 PRAMEF13Q5VWM6 474 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 CDCP2Q5VXM1 449 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 INTS3Q68E01 1043 aaKnown RBP3.8□□□□□ -1.8
YBX3-214ENST00000544501 RBBP8NLQ8NC74 664 aaPredicted RBP3.8□□□□□ -1.8
YBX3-214ENST00000544501 FAM13CQ8NE31 585 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 CYB5D2Q8WUJ1 264 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 COX4I2Q96KJ9 171 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 FERD3LQ96RJ6 166 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 GMLQ99445 158 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 TINF2Q9BSI4 451 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 OSBPL1AQ9BXW6 950 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 MKNK2Q9HBH9 465 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 GINM1Q9NU53 330 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 RNF112Q9ULX5 631 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 EFR3BQ9Y2G0 817 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 LEMD3Q9Y2U8 911 aa3.8□□□□□ -1.8
YBX3-214ENST00000544501 PRR19A6NJB7 356 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 FAM170BA6NMN3 283 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 SLITRK5O94991 958 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 EOMESO95936 686 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 FOSL1P15407 271 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 CYP7A1P22680 504 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 ETV3P41162 512 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 LETMD1Q6P1Q0 360 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 INTS5Q6P9B9 1019 aaKnown RBP3.79□□□□□ -1.8
YBX3-214ENST00000544501 ZNF765Q7L2R6 523 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 FAM214BQ7L5A3 538 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 SHISA5Q8N114 240 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 TAB3Q8N5C8 712 aaPredicted RBP3.79□□□□□ -1.8
YBX3-214ENST00000544501 TOP6BLQ8N6T0 577 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 OR6P1Q8NGX9 317 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 TMEM40Q8WWA1 233 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 CCDC74BQ96LY2 380 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 TM9SF2Q99805 663 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 CNNM2Q9H8M5 875 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 PIM2Q9P1W9 311 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 GTF2IRD1Q9UHL9 959 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 CEP131Q9UPN4 1083 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 MAPK8IP1Q9UQF2 711 aa3.79□□□□□ -1.8
YBX3-214ENST00000544501 UPK3BL1B0FP48 263 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 CHURC1-FNTBB4DL54 471 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 UPK3BL2E5RIL1 263 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 TNFRSF10CO14798 259 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 RGS13O14921 159 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 DNAJA2O60884 412 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 LEFTY1O75610 366 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 NME1P15531 152 aaKnown RBP3.78□□□□□ -1.8
YBX3-214ENST00000544501 RAG1P15918 1043 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 GRIK1P39086 918 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 GIPRP48546 466 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 NASPP49321 788 aaPredicted RBP3.78□□□□□ -1.8
YBX3-214ENST00000544501 ARID5AQ03989 594 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 NAALADL2Q58DX5 795 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 ARSHQ5FYA8 562 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 OVOS1Q6IE37 1185 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 C22orf34Q6ZV56 151 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 NLRC3Q7RTR2 1065 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 PPP1R13LQ8WUF5 828 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 ATG4CQ96DT6 458 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 CRBNQ96SW2 442 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 MIPEPQ99797 713 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms