RNA–Protein interactions for RNA: ENST00000544342.1

AL590560.1-203, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AL590560.1, Length 408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL590560.1-203ENST00000544342 NSUN4Q96CB9 384 aaKnown RBP9.9□□□□□ -0.82
AL590560.1-203ENST00000544342 NEUROD6Q96NK8 337 aa9.9□□□□□ -0.82
AL590560.1-203ENST00000544342 TSHZ2Q9NRE2 1034 aa9.9□□□□□ -0.82
AL590560.1-203ENST00000544342 MTMR10Q9NXD2 777 aa9.9□□□□□ -0.82
AL590560.1-203ENST00000544342 RAI14Q9P0K7 980 aa9.9□□□□□ -0.82
AL590560.1-203ENST00000544342 LRP2BPQ9P2M1 347 aa9.9□□□□□ -0.82
AL590560.1-203ENST00000544342 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.9□□□□□ -0.82
AL590560.1-203ENST00000544342 PA2G4Q9UQ80 394 aaKnown RBP9.9□□□□□ -0.82
AL590560.1-203ENST00000544342 LAMA2P24043 3122 aaKnown RBP9.9□□□□□ -0.82
AL590560.1-203ENST00000544342 FAM196BA6NMK8 535 aa9.89□□□□□ -0.83
AL590560.1-203ENST00000544342 USP17L10C9JJH3 530 aa9.89□□□□□ -0.83
AL590560.1-203ENST00000544342 SRGAP3O43295 1099 aa9.89□□□□□ -0.83
AL590560.1-203ENST00000544342 MSCO60682 206 aa9.89□□□□□ -0.83
AL590560.1-203ENST00000544342 UQCRFS1P1P0C7P4 283 aa9.89□□□□□ -0.83
AL590560.1-203ENST00000544342 HERVK_113P62684 666 aa9.89□□□□□ -0.83
AL590560.1-203ENST00000544342 CCNA1P78396 465 aa9.89□□□□□ -0.83
AL590560.1-203ENST00000544342 MTMR2Q13614 643 aa9.89□□□□□ -0.83
AL590560.1-203ENST00000544342 APBA2Q99767 749 aa9.89□□□□□ -0.83
AL590560.1-203ENST00000544342 LBHD1Q9BQE6 289 aaPredicted RBP9.89□□□□□ -0.83
AL590560.1-203ENST00000544342 PRKAG2Q9UGJ0 569 aa9.89□□□□□ -0.83
AL590560.1-203ENST00000544342 MYH1P12882 1939 aa9.88□□□□□ -0.83
AL590560.1-203ENST00000544342 HLA-DOAP06340 250 aa9.88□□□□□ -0.83
AL590560.1-203ENST00000544342 ARID4AP29374 1257 aaPredicted RBP9.88□□□□□ -0.83
AL590560.1-203ENST00000544342 ERVK-9P63128 1117 aa9.88□□□□□ -0.83
AL590560.1-203ENST00000544342 ERVK-24P63145 666 aa9.88□□□□□ -0.83
AL590560.1-203ENST00000544342 TFCP2Q12800 502 aa9.88□□□□□ -0.83
AL590560.1-203ENST00000544342 TRIM32Q13049 653 aa9.88□□□□□ -0.83
AL590560.1-203ENST00000544342 FAM109BQ6ICB4 259 aaPredicted RBP9.88□□□□□ -0.83
AL590560.1-203ENST00000544342 Q7L0L9 218 aa9.88□□□□□ -0.83
AL590560.1-203ENST00000544342 PLEKHH3Q7Z736 793 aa9.88□□□□□ -0.83
AL590560.1-203ENST00000544342 CERS3Q8IU89 383 aa9.88□□□□□ -0.83
AL590560.1-203ENST00000544342 FOXP4Q8IVH2 680 aaPredicted RBP9.88□□□□□ -0.83
AL590560.1-203ENST00000544342 HMG20BQ9P0W2 317 aa9.88□□□□□ -0.83
AL590560.1-203ENST00000544342 PFASO15067 1338 aa9.87□□□□□ -0.83
AL590560.1-203ENST00000544342 SIPA1L1O43166 1804 aa9.87□□□□□ -0.83
AL590560.1-203ENST00000544342 SLURP2P0DP57 97 aa9.87□□□□□ -0.83
AL590560.1-203ENST00000544342 COL6A1P12109 1028 aa9.87□□□□□ -0.83
AL590560.1-203ENST00000544342 CACNB2Q08289 660 aaPredicted RBP9.87□□□□□ -0.83
AL590560.1-203ENST00000544342 SLFN5Q08AF3 891 aa9.87□□□□□ -0.83
AL590560.1-203ENST00000544342 MTX1Q13505 466 aa9.87□□□□□ -0.83
AL590560.1-203ENST00000544342 MFSD14CQ5VZR4 134 aa9.87□□□□□ -0.83
AL590560.1-203ENST00000544342 NAA16Q6N069 864 aaPredicted RBP9.87□□□□□ -0.83
AL590560.1-203ENST00000544342 USP17L2Q6R6M4 530 aa9.87□□□□□ -0.83
AL590560.1-203ENST00000544342 GPR142Q7Z601 462 aa9.87□□□□□ -0.83
AL590560.1-203ENST00000544342 P2RX7Q99572 595 aaKnown RBP9.87□□□□□ -0.83
AL590560.1-203ENST00000544342 IVNS1ABPQ9Y6Y0 642 aa9.87□□□□□ -0.83
AL590560.1-203ENST00000544342 USP14P54578 494 aa9.86□□□□□ -0.83
AL590560.1-203ENST00000544342 G3BP1Q13283 466 aaKnown RBP eCLIP9.86□□□□□ -0.83
AL590560.1-203ENST00000544342 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.86□□□□□ -0.83
AL590560.1-203ENST00000544342 SH3RF3Q8TEJ3 882 aaPredicted RBP9.86□□□□□ -0.83
AL590560.1-203ENST00000544342 MEIS3Q99687 375 aa9.86□□□□□ -0.83
AL590560.1-203ENST00000544342 PAGR1Q9BTK6 254 aa9.86□□□□□ -0.83
AL590560.1-203ENST00000544342 AATFQ9NY61 560 aaKnown RBP eCLIP9.86□□□□□ -0.83
AL590560.1-203ENST00000544342 NOB1Q9ULX3 412 aaKnown RBP9.86□□□□□ -0.83
AL590560.1-203ENST00000544342 RABGAP1Q9Y3P9 1069 aa9.86□□□□□ -0.83
AL590560.1-203ENST00000544342 FLT1P17948 1338 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 PPP4CP60510 307 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 MDM2Q00987 491 aaPredicted RBP9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 MAP2K5Q13163 448 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 LRRC26Q2I0M4 334 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 CCDC158Q5M9N0 1113 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 MORN1Q5T089 497 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 ZNF697Q5TEC3 545 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 WDR78Q5VTH9 848 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 LHX8Q68G74 356 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 TBC1D9Q6ZT07 1266 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 METTL16Q86W50 562 aaKnown RBP9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 ZNF384Q8TF68 577 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 TGFBRAP1Q8WUH2 860 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 ARHGAP45Q92619 1136 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 USP6NLQ92738 828 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 EDC3Q96F86 508 aaKnown RBP9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 FEZ1Q99689 392 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 TXNRD2Q9NNW7 524 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 RBPJLQ9UBG7 517 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 ZBTB21Q9ULJ3 1066 aa9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 MYO5AQ9Y4I1 1855 aaKnown RBP9.85□□□□□ -0.83
AL590560.1-203ENST00000544342 SLC15A5A6NIM6 579 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 USP17L15C9J2P7 530 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 USP17L13C9JLJ4 530 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 USP17L11C9JVI0 530 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 USP17L18D6R9N7 530 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 USP17L22D6RA61 530 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 USP17L17D6RBQ6 530 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 USP17L19D6RCP7 530 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 USP17L20D6RJB6 530 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 POTEB2H3BUK9 544 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 IPO8O15397 1037 aaKnown RBP9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 GDF11O95390 407 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 CCND3P30281 292 aaPredicted RBP9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 MCAMP43121 646 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 ATP2B2Q01814 1243 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 USP17L24Q0WX57 530 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 TTC39AQ5SRH9 613 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 TMED8Q6PL24 325 aaPredicted RBP9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 PI16Q6UXB8 463 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 MAPKAPK5Q8IW41 473 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 LPAR1Q92633 364 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 C12orf42Q96LP6 360 aa9.84□□□□□ -0.83
AL590560.1-203ENST00000544342 SENP6Q9GZR1 1112 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms