RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 FOXN1O15353 648 aa21.38■■□□□ 1.01
TSFM-208ENST00000543727 APPP05067 770 aa21.38■■□□□ 1.01
TSFM-208ENST00000543727 GSPT1P15170 499 aaKnown RBP21.38■■□□□ 1.01
TSFM-208ENST00000543727 TDO2P48775 406 aa21.38■■□□□ 1.01
TSFM-208ENST00000543727 CERKLQ49MI3 558 aaPredicted RBP21.38■■□□□ 1.01
TSFM-208ENST00000543727 NOM1Q5C9Z4 860 aaKnown RBP21.38■■□□□ 1.01
TSFM-208ENST00000543727 CTR9Q6PD62 1173 aa21.38■■□□□ 1.01
TSFM-208ENST00000543727 ZNF287Q9HBT7 754 aa21.38■■□□□ 1.01
TSFM-208ENST00000543727 RNF186Q9NXI6 227 aa21.38■■□□□ 1.01
TSFM-208ENST00000543727 PPP4R2Q9NY27 417 aa21.38■■□□□ 1.01
TSFM-208ENST00000543727 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.38■■□□□ 1.01
TSFM-208ENST00000543727 CCDC171Q6TFL3 1326 aa21.37■■□□□ 1.01
TSFM-208ENST00000543727 CCL15-CCL14A0A0B4J2E2 113 aa21.37■■□□□ 1.01
TSFM-208ENST00000543727 A0A0D9SFI3 127 aa21.37■■□□□ 1.01
TSFM-208ENST00000543727 SLURP2P0DP57 97 aa21.37■■□□□ 1.01
TSFM-208ENST00000543727 SHMT1P34896 483 aa21.37■■□□□ 1.01
TSFM-208ENST00000543727 NMIQ13287 307 aaPredicted RBP21.37■■□□□ 1.01
TSFM-208ENST00000543727 CCL15Q16663 113 aa21.37■■□□□ 1.01
TSFM-208ENST00000543727 SLC4A8Q2Y0W8 1093 aa21.37■■□□□ 1.01
TSFM-208ENST00000543727 C16orf86Q6ZW13 317 aa21.37■■□□□ 1.01
TSFM-208ENST00000543727 IFNL3Q8IZI9 196 aa21.37■■□□□ 1.01
TSFM-208ENST00000543727 CCDC17Q96LX7 622 aa21.37■■□□□ 1.01
TSFM-208ENST00000543727 FAM227BQ96M60 508 aa21.37■■□□□ 1.01
TSFM-208ENST00000543727 WDR18Q9BV38 432 aa21.37■■□□□ 1.01
TSFM-208ENST00000543727 EPB41L4AQ9HCS5 686 aaPredicted RBP21.37■■□□□ 1.01
TSFM-208ENST00000543727 ZBTB21Q9ULJ3 1066 aa21.37■■□□□ 1.01
TSFM-208ENST00000543727 GREB1LQ9C091 1923 aaPredicted RBP21.37■■□□□ 1.01
TSFM-208ENST00000543727 RRP1BQ14684 758 aaKnown RBP21.36■■□□□ 1.01
TSFM-208ENST00000543727 ALX1Q15699 326 aa21.36■■□□□ 1.01
TSFM-208ENST00000543727 FASTKD5Q7L8L6 764 aaKnown RBP21.36■■□□□ 1.01
TSFM-208ENST00000543727 ZNF280CQ8ND82 737 aa21.36■■□□□ 1.01
TSFM-208ENST00000543727 BRI3BPQ8WY22 251 aa21.36■■□□□ 1.01
TSFM-208ENST00000543727 NAPBQ9H115 298 aa21.36■■□□□ 1.01
TSFM-208ENST00000543727 CABP5Q9NP86 173 aa21.36■■□□□ 1.01
TSFM-208ENST00000543727 PRDM10Q9NQV6 1147 aa21.36■■□□□ 1.01
TSFM-208ENST00000543727 RAD50Q92878 1312 aa21.35■■□□□ 1.01
TSFM-208ENST00000543727 A0A0G2JLL6 359 aaPredicted RBP21.35■■□□□ 1.01
TSFM-208ENST00000543727 IGF2BP3O00425 579 aaKnown RBP eCLIP21.35■■□□□ 1.01
TSFM-208ENST00000543727 TRPA1O75762 1119 aa21.35■■□□□ 1.01
TSFM-208ENST00000543727 HSPA8P11142 646 aaKnown RBP21.35■■□□□ 1.01
TSFM-208ENST00000543727 ABCB5Q2M3G0 1257 aa21.35■■□□□ 1.01
TSFM-208ENST00000543727 PRRT2Q7Z6L0 340 aaPredicted RBP21.35■■□□□ 1.01
TSFM-208ENST00000543727 SLC3A2P08195 630 aaKnown RBP21.34■■□□□ 1.01
TSFM-208ENST00000543727 CYP2D6P10635 497 aa21.34■■□□□ 1.01
TSFM-208ENST00000543727 ANKRD23Q86SG2 305 aa21.34■■□□□ 1.01
TSFM-208ENST00000543727 PROCA1Q8NCQ7 364 aaPredicted RBP21.34■■□□□ 1.01
TSFM-208ENST00000543727 RUFY2Q8WXA3 655 aa21.34■■□□□ 1.01
TSFM-208ENST00000543727 SLC45A1Q9Y2W3 748 aa21.34■■□□□ 1.01
TSFM-208ENST00000543727 GDF11O95390 407 aa21.33■■□□□ 1.01
TSFM-208ENST00000543727 GH2P01242 217 aa21.33■■□□□ 1.01
TSFM-208ENST00000543727 CDK8P49336 464 aa21.33■■□□□ 1.01
TSFM-208ENST00000543727 BMP2KLQ5H9B9 411 aa21.33■■□□□ 1.01
TSFM-208ENST00000543727 CCDC129Q6ZRS4 1044 aa21.33■■□□□ 1.01
TSFM-208ENST00000543727 TMEM179Q6ZVK1 233 aa21.33■■□□□ 1.01
TSFM-208ENST00000543727 PTPN18Q99952 460 aa21.33■■□□□ 1.01
TSFM-208ENST00000543727 TRIM75PA6NK02 468 aa21.32■■□□□ 1
TSFM-208ENST00000543727 C19orf81C9J6K1 198 aa21.32■■□□□ 1
TSFM-208ENST00000543727 SH3D19Q5HYK7 790 aa21.32■■□□□ 1
TSFM-208ENST00000543727 CWC27Q6UX04 472 aaKnown RBP21.32■■□□□ 1
TSFM-208ENST00000543727 CYP2D7A0A087X1C5 515 aa21.31■■□□□ 1
TSFM-208ENST00000543727 MINDY4BA8MYZ0 360 aa21.31■■□□□ 1
TSFM-208ENST00000543727 FOXP2O15409 715 aa21.31■■□□□ 1
TSFM-208ENST00000543727 HSPD1P10809 573 aaKnown RBP21.31■■□□□ 1
TSFM-208ENST00000543727 PDE4BQ07343 736 aa21.31■■□□□ 1
TSFM-208ENST00000543727 ZNF589Q86UQ0 364 aaPredicted RBP21.31■■□□□ 1
TSFM-208ENST00000543727 DYNLL2Q96FJ2 89 aa21.31■■□□□ 1
TSFM-208ENST00000543727 ANAPC4Q9UJX5 808 aa21.31■■□□□ 1
TSFM-208ENST00000543727 BTBD19C9JJ37 291 aa21.3■■□□□ 1
TSFM-208ENST00000543727 USP17L10C9JJH3 530 aa21.3■■□□□ 1
TSFM-208ENST00000543727 LBX1P52954 281 aa21.3■■□□□ 1
TSFM-208ENST00000543727 BACE1P56817 501 aa21.3■■□□□ 1
TSFM-208ENST00000543727 PPARAQ07869 468 aa21.3■■□□□ 1
TSFM-208ENST00000543727 SPP2Q13103 211 aa21.3■■□□□ 1
TSFM-208ENST00000543727 MOGSQ13724 837 aa21.3■■□□□ 1
TSFM-208ENST00000543727 SLC44A5Q8NCS7 719 aa21.3■■□□□ 1
TSFM-208ENST00000543727 ZFYVE28Q9HCC9 887 aa21.3■■□□□ 1
TSFM-208ENST00000543727 CASP8AP2Q9UKL3 1982 aa21.3■■□□□ 1
TSFM-208ENST00000543727 MYH4Q9Y623 1939 aa21.29■■□□□ 1
TSFM-208ENST00000543727 NT5C2P49902 561 aa21.29■■□□□ 1
TSFM-208ENST00000543727 USP14P54578 494 aa21.29■■□□□ 1
TSFM-208ENST00000543727 EVX2Q03828 476 aa21.29■■□□□ 1
TSFM-208ENST00000543727 PABPC4Q13310 644 aaKnown RBP eCLIP21.29■■□□□ 13e-7■■□□□ 12.7
TSFM-208ENST00000543727 RAB3GAP1Q15042 981 aa21.29■■□□□ 1
TSFM-208ENST00000543727 TAF1CQ15572 869 aaPredicted RBP21.29■■□□□ 1
TSFM-208ENST00000543727 VPS53Q5VIR6 699 aa21.29■■□□□ 1
TSFM-208ENST00000543727 FAM43AQ8N2R8 423 aa21.29■■□□□ 1
TSFM-208ENST00000543727 DSCC1Q9BVC3 393 aa21.29■■□□□ 1
TSFM-208ENST00000543727 MKNK2Q9HBH9 465 aa21.29■■□□□ 1
TSFM-208ENST00000543727 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.29■■□□□ 1
TSFM-208ENST00000543727 AGTPBP1Q9UPW5 1226 aa21.29■■□□□ 1
TSFM-208ENST00000543727 PLIN4Q96Q06 1357 aa21.28■■□□□ 1
TSFM-208ENST00000543727 PCP11498 1178 aaKnown RBP21.28■■□□□ 1
TSFM-208ENST00000543727 CHMLP26374 656 aa21.28■■□□□ 1
TSFM-208ENST00000543727 JAG1P78504 1218 aa21.28■■□□□ 1
TSFM-208ENST00000543727 PARK7Q99497 189 aaKnown RBP21.28■■□□□ 1
TSFM-208ENST00000543727 KIAA1683Q9H0B3 1180 aa21.28■■□□□ 1
TSFM-208ENST00000543727 SH2D4AQ9H788 454 aa21.28■■□□□ 1
TSFM-208ENST00000543727 TMOD4Q9NZQ9 345 aa21.28■■□□□ 1
TSFM-208ENST00000543727 MPHOSPH10O00566 681 aaKnown RBP21.27■■□□□ 1
TSFM-208ENST00000543727 FGAP02671 866 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms