RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 TMPOP42166 694 aaKnown RBP6.21□□□□□ -1.42
NPIPB4-219ENST00000543660 CHRNDQ07001 517 aa6.21□□□□□ -1.42
NPIPB4-219ENST00000543660 LCE2AQ5TA79 106 aaPredicted RBP6.21□□□□□ -1.42
NPIPB4-219ENST00000543660 DUSP27Q5VZP5 1158 aa6.21□□□□□ -1.42
NPIPB4-219ENST00000543660 DZIP1LQ8IYY4 767 aaKnown RBP6.21□□□□□ -1.42
NPIPB4-219ENST00000543660 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.21□□□□□ -1.42
NPIPB4-219ENST00000543660 EMID1Q96A84 441 aaPredicted RBP6.21□□□□□ -1.42
NPIPB4-219ENST00000543660 CHMP4AQ9BY43 222 aa6.21□□□□□ -1.42
NPIPB4-219ENST00000543660 KCNH4Q9UQ05 1017 aa6.21□□□□□ -1.42
NPIPB4-219ENST00000543660 USTQ9Y2C2 406 aa6.21□□□□□ -1.42
NPIPB4-219ENST00000543660 DNAH12Q6ZR08 3092 aa6.21□□□□□ -1.42
NPIPB4-219ENST00000543660 SPEF2Q9C093 1822 aa6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 FAM187AA6NFU0 413 aa6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 TAF5LO75529 589 aa6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 CYP2C8P10632 490 aa6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 ITGA6P23229 1130 aa6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 INPP5BP32019 993 aa6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 MLLT3P42568 568 aaPredicted RBP6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 KCNJ4P48050 445 aa6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 LMOD3Q0VAK6 560 aa6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 GPAT2Q6NUI2 795 aa6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 MAFAQ8NHW3 353 aaPredicted RBP6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 SYMPKQ92797 1274 aaKnown RBP6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 CDX2Q99626 313 aaPredicted RBP6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 CDHR5Q9HBB8 845 aa6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 TTF2Q9UNY4 1162 aaKnown RBP6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 LAS1LQ9Y4W2 734 aaKnown RBP6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 DOCK3Q8IZD9 2030 aa6.2□□□□□ -1.42
NPIPB4-219ENST00000543660 ARAP2Q8WZ64 1704 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 H7C1W4 665 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 GDF9O60383 454 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 CSF1RP07333 972 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 TNNI2P48788 182 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 CACNB3P54284 484 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 SH3D19Q5HYK7 790 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 MFSD14BQ5SR56 506 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 ZNF697Q5TEC3 545 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 ZNF804AQ7Z570 1209 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 PARK7Q99497 189 aaKnown RBP6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 MPHOSPH8Q99549 860 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 C11orf49Q9H6J7 331 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 MAP3K2Q9Y2U5 619 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 MGAMO43451 1857 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 PFASO15067 1338 aa6.19□□□□□ -1.42
NPIPB4-219ENST00000543660 TNFRSF10AO00220 468 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 TNPO2O14787 897 aaKnown RBP6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 CRKP46108 304 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 CASP7P55210 303 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 MDM2Q00987 491 aaPredicted RBP6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 GRIK5Q16478 980 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 CWF19L2Q2TBE0 894 aaKnown RBP6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 BLOC1S3Q6QNY0 202 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 PADI6Q6TGC4 694 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 MIGA2Q7L4E1 593 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 UBE3BQ7Z3V4 1068 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 FAM83AQ86UY5 434 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 TDRD7Q8NHU6 1098 aaKnown RBP6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 FAM122AQ96E09 287 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 PLA2G12BQ9BX93 195 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 SEMA6BQ9H3T3 888 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 ZNF112Q9UJU3 913 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 OGDHLQ9ULD0 1010 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 MYH3P11055 1940 aa6.18□□□□□ -1.42
NPIPB4-219ENST00000543660 PI4KAP2A4QPH2 592 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 NEURL1BA8MQ27 555 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 ELL2O00472 640 aaPredicted RBP6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 CXCL11O14625 94 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 DDX58O95786 925 aaKnown RBP6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 COL6A1P12109 1028 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 TRIM32Q13049 653 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 NOL9Q5SY16 702 aaKnown RBP6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 FKBP1CQ5VVH2 108 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 DCAF15Q66K64 600 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 KSR2Q6VAB6 950 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 LIAT1Q6ZQX7 453 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 PI4KAP1Q8N8J0 262 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 HOOK2Q96ED9 719 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 SNX27Q96L92 541 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 PCGF6Q9BYE7 350 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 ZNF341Q9BYN7 854 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 TTYH1Q9H313 450 aaPredicted RBP6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 NPDC1Q9NQX5 325 aaPredicted RBP6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 AAASQ9NRG9 546 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 MBIPQ9NS73 344 aa6.17□□□□□ -1.42
NPIPB4-219ENST00000543660 DDX60LQ5H9U9 1706 aaKnown RBP6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 A0A0G2JLL6 359 aaPredicted RBP6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 HMGCRP04035 888 aa6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 ZNF853P0CG23 659 aa6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 HDLBPQ00341 1268 aaKnown RBP6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 LRRC26Q2I0M4 334 aa6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 APOBEC3HQ6NTF7 200 aaKnown RBP6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 PRRT2Q7Z6L0 340 aaPredicted RBP6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 CRIPAKQ8N1N5 446 aa6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 MYLIPQ8WY64 445 aa6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 COA7Q96BR5 231 aa6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 FAM84BQ96KN1 310 aaPredicted RBP6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 ZDHHC15Q96MV8 337 aa6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 MRIQ9BWK5 157 aa6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 HMX1Q9NP08 348 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms