RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-223	ENST00000543658	IREB2	P48200	963 aa	Known RBP	14.02	□□□□□ -0.17
DDB1-223	ENST00000543658	CDAN1	Q8IWY9	1227 aa		14.02	□□□□□ -0.17
DDB1-223	ENST00000543658	TAF6L	Q9Y6J9	622 aa		14.02	□□□□□ -0.17
DDB1-223	ENST00000543658	SSC5D	A1L4H1	1573 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	SMIM22	K7EJ46	135 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	ST18	O60284	1047 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	FGR	P09769	529 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	RASA1	P20936	1047 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	SHMT1	P34896	483 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	TFAP4	Q01664	338 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	PRKG1	Q13976	671 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	ABCB5	Q2M3G0	1257 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	CCDC178	Q5BJE1	867 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	PPP4R3B	Q5MIZ7	849 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	RUFY3	Q7L099	469 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	DHX32	Q7L7V1	743 aa	Known RBP	14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	ARMC9	Q7Z3E5	817 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	METTL16	Q86W50	562 aa	Known RBP	14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	SMC1B	Q8NDV3	1235 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	IL27	Q8NEV9	243 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	DNAJC18	Q9H819	358 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	INCENP	Q9NQS7	918 aa		14.01	□□□□□ -0.17
DDB1-223	ENST00000543658	WDR19	Q8NEZ3	1342 aa		14	□□□□□ -0.17
DDB1-223	ENST00000543658	KIF3C	O14782	793 aa		14	□□□□□ -0.17
DDB1-223	ENST00000543658	PRC1	O43663	620 aa		14	□□□□□ -0.17
DDB1-223	ENST00000543658	GDF11	O95390	407 aa		14	□□□□□ -0.17
DDB1-223	ENST00000543658	RPS6KB1	P23443	525 aa		14	□□□□□ -0.17
DDB1-223	ENST00000543658	NEK4	P51957	841 aa		14	□□□□□ -0.17
DDB1-223	ENST00000543658	FAM47A	Q5JRC9	791 aa		14	□□□□□ -0.17
DDB1-223	ENST00000543658	TATDN1	Q6P1N9	297 aa		14	□□□□□ -0.17
DDB1-223	ENST00000543658	MB21D2	Q8IYB1	491 aa	Predicted RBP	14	□□□□□ -0.17
DDB1-223	ENST00000543658	WRNIP1	Q96S55	665 aa		14	□□□□□ -0.17
DDB1-223	ENST00000543658	UPF3B	Q9BZI7	483 aa	Known RBP	14	□□□□□ -0.17
DDB1-223	ENST00000543658	PDRG1	Q9NUG6	133 aa		14	□□□□□ -0.17
DDB1-223	ENST00000543658	ANGEL1	Q9UNK9	670 aa	Known RBP	14	□□□□□ -0.17
DDB1-223	ENST00000543658	PLIN4	Q96Q06	1357 aa		13.99	□□□□□ -0.17
DDB1-223	ENST00000543658	TRAF5	O00463	557 aa		13.99	□□□□□ -0.17
DDB1-223	ENST00000543658	IFIT3	O14879	490 aa	Known RBP	13.99	□□□□□ -0.17
DDB1-223	ENST00000543658	AKR1B1	P15121	316 aa		13.99	□□□□□ -0.17
DDB1-223	ENST00000543658	TMEM179	Q6ZVK1	233 aa		13.99	□□□□□ -0.17
DDB1-223	ENST00000543658	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.99	□□□□□ -0.17
DDB1-223	ENST00000543658	IL17RA	Q96F46	866 aa		13.99	□□□□□ -0.17
DDB1-223	ENST00000543658	TMEM87B	Q96K49	555 aa		13.99	□□□□□ -0.17
DDB1-223	ENST00000543658	ZSWIM6	Q9HCJ5	1215 aa		13.99	□□□□□ -0.17
DDB1-223	ENST00000543658	PICK1	Q9NRD5	415 aa		13.99	□□□□□ -0.17
DDB1-223	ENST00000543658	GINM1	Q9NU53	330 aa		13.99	□□□□□ -0.17
DDB1-223	ENST00000543658	CSAD	Q9Y600	493 aa		13.99	□□□□□ -0.17
DDB1-223	ENST00000543658	TNKS	O95271	1327 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	CTNND1	O60716	968 aa	Known RBP	13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	TOMM70	O94826	608 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	CELF2	O95319	508 aa	Known RBP	13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	ASNS	P08243	561 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	SLURP2	P0DP57	97 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	CPA1	P15085	419 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	CAP2	P40123	477 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	MAP3K10	Q02779	954 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	WTAP	Q15007	396 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	RAB3GAP1	Q15042	981 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	ANKRD1	Q15327	319 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	TMEM67	Q5HYA8	995 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	NFXL1	Q6ZNB6	911 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	CYB5R4	Q7L1T6	521 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	CHST3	Q7LGC8	479 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	C2orf69	Q8N8R5	385 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	NEDD1	Q8NHV4	660 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	RBM46	Q8TBY0	533 aa	Known RBP	13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	ZKSCAN3	Q9BRR0	538 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	MTA3	Q9BTC8	594 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	ZSWIM5	Q9P217	1185 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	TACC3	Q9Y6A5	838 aa		13.98	□□□□□ -0.17
DDB1-223	ENST00000543658	PHIP	Q8WWQ0	1821 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	CCDC69	A6NI79	296 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	GH2	P01242	217 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	FKBP1B	P68106	108 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	ATP2B2	Q01814	1243 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	ICA1	Q05084	483 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	IFIT1B	Q5T764	474 aa	Known RBP	13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	DLK2	Q6UY11	383 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658		Q6ZUG5	572 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	SCYL3	Q8IZE3	742 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	KLRG1	Q96E93	195 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	TCEANC2	Q96MN5	208 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	AS3MT	Q9HBK9	375 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	ARHGEF10L	Q9HCE6	1279 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	GBA2	Q9HCG7	927 aa	Predicted RBP	13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	ZBTB21	Q9ULJ3	1066 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	STX8	Q9UNK0	236 aa		13.97	□□□□□ -0.17
DDB1-223	ENST00000543658	USP2	O75604	605 aa	Predicted RBP	13.96	□□□□□ -0.17
DDB1-223	ENST00000543658	INPP5B	P32019	993 aa		13.96	□□□□□ -0.17
DDB1-223	ENST00000543658	ANP32A	P39687	249 aa	Known RBP	13.96	□□□□□ -0.17
DDB1-223	ENST00000543658	MAP3K9	P80192	1104 aa		13.96	□□□□□ -0.17
DDB1-223	ENST00000543658	SYNE3	Q6ZMZ3	975 aa		13.96	□□□□□ -0.17
DDB1-223	ENST00000543658	ANKRD13A	Q8IZ07	590 aa		13.96	□□□□□ -0.17
DDB1-223	ENST00000543658	TMTC2	Q8N394	836 aa		13.96	□□□□□ -0.17
DDB1-223	ENST00000543658	KIF2C	Q99661	725 aa		13.96	□□□□□ -0.17
DDB1-223	ENST00000543658	LRRC2	Q9BYS8	371 aa		13.96	□□□□□ -0.17

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