RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 PTPRAP18433 802 aa13.62□□□□□ -0.23
COPS7A-217ENST00000543537 ZAP70P43403 619 aa13.62□□□□□ -0.23
COPS7A-217ENST00000543537 CAP1Q01518 475 aa13.62□□□□□ -0.23
COPS7A-217ENST00000543537 MAP3K12Q12852 859 aa13.62□□□□□ -0.23
COPS7A-217ENST00000543537 UBE3CQ15386 1083 aa13.62□□□□□ -0.23
COPS7A-217ENST00000543537 NAA16Q6N069 864 aaPredicted RBP13.62□□□□□ -0.23
COPS7A-217ENST00000543537 ZSCAN29Q8IWY8 852 aaPredicted RBP13.62□□□□□ -0.23
COPS7A-217ENST00000543537 ALDH8A1Q9H2A2 487 aaPredicted RBP13.62□□□□□ -0.23
COPS7A-217ENST00000543537 DHX36Q9H2U1 1008 aaKnown RBP13.62□□□□□ -0.23
COPS7A-217ENST00000543537 CHMP5Q9NZZ3 219 aa13.62□□□□□ -0.23
COPS7A-217ENST00000543537 AFG3L2Q9Y4W6 797 aa13.62□□□□□ -0.23
COPS7A-217ENST00000543537 TRIM17Q9Y577 477 aa13.62□□□□□ -0.23
COPS7A-217ENST00000543537 ADGRA2Q96PE1 1338 aa13.62□□□□□ -0.23
COPS7A-217ENST00000543537 A0A0G2JLL6 359 aaPredicted RBP13.61□□□□□ -0.23
COPS7A-217ENST00000543537 GOLIM4O00461 696 aa13.61□□□□□ -0.23
COPS7A-217ENST00000543537 NMIQ13287 307 aaPredicted RBP13.61□□□□□ -0.23
COPS7A-217ENST00000543537 PICALMQ13492 652 aa13.61□□□□□ -0.23
COPS7A-217ENST00000543537 ARHGEF6Q15052 776 aa13.61□□□□□ -0.23
COPS7A-217ENST00000543537 ZMYM1Q5SVZ6 1142 aa13.61□□□□□ -0.23
COPS7A-217ENST00000543537 C17orf99Q6UX52 265 aa13.61□□□□□ -0.23
COPS7A-217ENST00000543537 PRRT2Q7Z6L0 340 aaPredicted RBP13.61□□□□□ -0.23
COPS7A-217ENST00000543537 TEX11Q8IYF3 940 aa13.61□□□□□ -0.23
COPS7A-217ENST00000543537 CD99L2Q8TCZ2 262 aa13.61□□□□□ -0.23
COPS7A-217ENST00000543537 INTS4Q96HW7 963 aaKnown RBP13.61□□□□□ -0.23
COPS7A-217ENST00000543537 ZSCAN31Q96LW9 406 aaPredicted RBP13.61□□□□□ -0.23
COPS7A-217ENST00000543537 EFCC1Q9HA90 598 aa13.61□□□□□ -0.23
COPS7A-217ENST00000543537 PIH1D3Q9NQM4 214 aaKnown RBP13.61□□□□□ -0.23
COPS7A-217ENST00000543537 PICK1Q9NRD5 415 aa13.61□□□□□ -0.23
COPS7A-217ENST00000543537 HERC5Q9UII4 1024 aaKnown RBP13.61□□□□□ -0.23
COPS7A-217ENST00000543537 PTPN22Q9Y2R2 807 aa13.61□□□□□ -0.23
COPS7A-217ENST00000543537 SLC45A1Q9Y2W3 748 aa13.61□□□□□ -0.23
COPS7A-217ENST00000543537 GNRH1P01148 92 aa13.6□□□□□ -0.23
COPS7A-217ENST00000543537 GNAT2P19087 354 aa13.6□□□□□ -0.23
COPS7A-217ENST00000543537 NT5C2P49902 561 aa13.6□□□□□ -0.23
COPS7A-217ENST00000543537 NEK4P51957 841 aa13.6□□□□□ -0.23
COPS7A-217ENST00000543537 NECTIN1Q15223 517 aa13.6□□□□□ -0.23
COPS7A-217ENST00000543537 GPAT2Q6NUI2 795 aa13.6□□□□□ -0.23
COPS7A-217ENST00000543537 FASTKD5Q7L8L6 764 aaKnown RBP13.6□□□□□ -0.23
COPS7A-217ENST00000543537 ADGRA1Q86SQ6 560 aa13.6□□□□□ -0.23
COPS7A-217ENST00000543537 SH3RF3Q8TEJ3 882 aaPredicted RBP13.6□□□□□ -0.23
COPS7A-217ENST00000543537 APPBP2Q92624 585 aa13.6□□□□□ -0.23
COPS7A-217ENST00000543537 ARMC5Q96C12 935 aa13.6□□□□□ -0.23
COPS7A-217ENST00000543537 ANP32EQ9BTT0 268 aa13.6□□□□□ -0.23
COPS7A-217ENST00000543537 PI4KBQ9UBF8 816 aa13.6□□□□□ -0.23
COPS7A-217ENST00000543537 CYP46A1Q9Y6A2 500 aa13.6□□□□□ -0.23
COPS7A-217ENST00000543537 NUCB2P80303 420 aa13.59□□□□□ -0.23
COPS7A-217ENST00000543537 LACTBP83111 547 aaPredicted RBP13.59□□□□□ -0.23
COPS7A-217ENST00000543537 VPS53Q5VIR6 699 aa13.59□□□□□ -0.23
COPS7A-217ENST00000543537 NOL10Q9BSC4 688 aaKnown RBP13.59□□□□□ -0.23
COPS7A-217ENST00000543537 SH2B1Q9NRF2 756 aaPredicted RBP13.59□□□□□ -0.23
COPS7A-217ENST00000543537 GINM1Q9NU53 330 aa13.59□□□□□ -0.23
COPS7A-217ENST00000543537 AATFQ9NY61 560 aaKnown RBP eCLIP13.59□□□□□ -0.23
COPS7A-217ENST00000543537 ZHX2Q9Y6X8 837 aa13.59□□□□□ -0.23
COPS7A-217ENST00000543537 PDE4DIPQ5VU43 2346 aa13.59□□□□□ -0.23
COPS7A-217ENST00000543537 FLT1P17948 1338 aa13.59□□□□□ -0.23
COPS7A-217ENST00000543537 DOCK1Q14185 1865 aa13.59□□□□□ -0.23
COPS7A-217ENST00000543537 CENPFP49454 3210 aa13.58□□□□□ -0.23
COPS7A-217ENST00000543537 FOCADQ5VW36 1801 aa13.58□□□□□ -0.24
COPS7A-217ENST00000543537 PHIPQ8WWQ0 1821 aa13.58□□□□□ -0.24
COPS7A-217ENST00000543537 PDHXO00330 501 aa13.58□□□□□ -0.24
COPS7A-217ENST00000543537 SLURP2P0DP57 97 aa13.58□□□□□ -0.24
COPS7A-217ENST00000543537 CAP2P40123 477 aa13.58□□□□□ -0.24
COPS7A-217ENST00000543537 FOXP4Q8IVH2 680 aaPredicted RBP13.58□□□□□ -0.24
COPS7A-217ENST00000543537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.58□□□□□ -0.24
COPS7A-217ENST00000543537 PTPRFP10586 1907 aa13.58□□□□□ -0.24
COPS7A-217ENST00000543537 KIAA0100Q14667 2235 aaKnown RBP13.58□□□□□ -0.24
COPS7A-217ENST00000543537 MYO5AQ9Y4I1 1855 aaKnown RBP13.57□□□□□ -0.24
COPS7A-217ENST00000543537 PRMT2P55345 433 aa13.57□□□□□ -0.24
COPS7A-217ENST00000543537 SOX10P56693 466 aa13.57□□□□□ -0.24
COPS7A-217ENST00000543537 PARK7Q99497 189 aaKnown RBP13.57□□□□□ -0.24
COPS7A-217ENST00000543537 ZSWIM6Q9HCJ5 1215 aa13.57□□□□□ -0.24
COPS7A-217ENST00000543537 RBM8AQ9Y5S9 174 aaKnown RBP13.57□□□□□ -0.24
COPS7A-217ENST00000543537 SNX14Q9Y5W7 946 aa13.57□□□□□ -0.24
COPS7A-217ENST00000543537 BRCA2P51587 3418 aa13.57□□□□□ -0.24
COPS7A-217ENST00000543537 SIPA1L1O43166 1804 aa13.57□□□□□ -0.24
COPS7A-217ENST00000543537 IDH1O75874 414 aaKnown RBP13.56□□□□□ -0.24
COPS7A-217ENST00000543537 BCRP11274 1271 aa13.56□□□□□ -0.24
COPS7A-217ENST00000543537 CYP7A1P22680 504 aa13.56□□□□□ -0.24
COPS7A-217ENST00000543537 CREB3L3Q68CJ9 461 aa13.56□□□□□ -0.24
COPS7A-217ENST00000543537 PROCA1Q8NCQ7 364 aaPredicted RBP13.56□□□□□ -0.24
COPS7A-217ENST00000543537 TGFBRAP1Q8WUH2 860 aa13.56□□□□□ -0.24
COPS7A-217ENST00000543537 FAM227BQ96M60 508 aa13.56□□□□□ -0.24
COPS7A-217ENST00000543537 NACAP1Q9BZK3 213 aa13.56□□□□□ -0.24
COPS7A-217ENST00000543537 ANTXR1Q9H6X2 564 aa13.56□□□□□ -0.24
COPS7A-217ENST00000543537 DNAJC18Q9H819 358 aa13.56□□□□□ -0.24
COPS7A-217ENST00000543537 LIMCH1Q9UPQ0 1083 aa13.56□□□□□ -0.24
COPS7A-217ENST00000543537 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.56□□□□□ -0.24
COPS7A-217ENST00000543537 CDK5RAP2Q96SN8 1893 aa13.56□□□□□ -0.24
COPS7A-217ENST00000543537 A0A0D9SFI3 127 aa13.55□□□□□ -0.24
COPS7A-217ENST00000543537 RRP1BQ14684 758 aaKnown RBP13.55□□□□□ -0.24
COPS7A-217ENST00000543537 KIF22Q14807 665 aa13.55□□□□□ -0.24
COPS7A-217ENST00000543537 IMMTQ16891 758 aaKnown RBP13.55□□□□□ -0.24
COPS7A-217ENST00000543537 SH3D19Q5HYK7 790 aa13.55□□□□□ -0.24
COPS7A-217ENST00000543537 BLOC1S2Q6QNY1 142 aa13.55□□□□□ -0.24
COPS7A-217ENST00000543537 RUFY3Q7L099 469 aa13.55□□□□□ -0.24
COPS7A-217ENST00000543537 ZNF280CQ8ND82 737 aa13.55□□□□□ -0.24
COPS7A-217ENST00000543537 RIOK1Q9BRS2 568 aaKnown RBP13.55□□□□□ -0.24
COPS7A-217ENST00000543537 WDR18Q9BV38 432 aa13.55□□□□□ -0.24
COPS7A-217ENST00000543537 AGTPBP1Q9UPW5 1226 aa13.55□□□□□ -0.24
COPS7A-217ENST00000543537 ZMYM6O95789 1325 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms