RNA–Protein interactions for RNA: ENST00000543510.1

TMEM258-207, Transcript of transmembrane protein 258, humanhuman

TSL 2 BASIC

Gene TMEM258, Length 1,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-207ENST00000543510 SCN4AP35499 1836 aa17.58■□□□□ 0.4
TMEM258-207ENST00000543510 WDR19Q8NEZ3 1342 aa17.58■□□□□ 0.4
TMEM258-207ENST00000543510 TSPY2A6NKD2 308 aa17.58■□□□□ 0.4
TMEM258-207ENST00000543510 NPM3O75607 178 aaKnown RBP17.58■□□□□ 0.4
TMEM258-207ENST00000543510 TNFAIP1Q13829 316 aa17.58■□□□□ 0.4
TMEM258-207ENST00000543510 L3MBTL3Q96JM7 780 aaPredicted RBP17.58■□□□□ 0.4
TMEM258-207ENST00000543510 ZNF287Q9HBT7 754 aa17.58■□□□□ 0.4
TMEM258-207ENST00000543510 ZSWIM5Q9P217 1185 aa17.58■□□□□ 0.4
TMEM258-207ENST00000543510 PI4KBQ9UBF8 816 aa17.58■□□□□ 0.4
TMEM258-207ENST00000543510 BAG4O95429 457 aaKnown RBP17.57■□□□□ 0.4
TMEM258-207ENST00000543510 GJB2P29033 226 aa17.57■□□□□ 0.4
TMEM258-207ENST00000543510 STK3Q13188 491 aa17.57■□□□□ 0.4
TMEM258-207ENST00000543510 C16orf86Q6ZW13 317 aa17.57■□□□□ 0.4
TMEM258-207ENST00000543510 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.57■□□□□ 0.4
TMEM258-207ENST00000543510 ROBO3Q96MS0 1386 aa17.57■□□□□ 0.4
TMEM258-207ENST00000543510 WDR33Q9C0J8 1336 aaKnown RBP17.56■□□□□ 0.4
TMEM258-207ENST00000543510 IQCA1LA6NCM1 817 aa17.56■□□□□ 0.4
TMEM258-207ENST00000543510 PFKFB2O60825 505 aa17.56■□□□□ 0.4
TMEM258-207ENST00000543510 ANTXR2P58335 489 aa17.56■□□□□ 0.4
TMEM258-207ENST00000543510 APOBRQ0VD83 1088 aa17.56■□□□□ 0.4
TMEM258-207ENST00000543510 FKBP1CQ5VVH2 108 aa17.56■□□□□ 0.4
TMEM258-207ENST00000543510 FAM83AQ86UY5 434 aa17.56■□□□□ 0.4
TMEM258-207ENST00000543510 APOBEC3FQ8IUX4 373 aaKnown RBP17.56■□□□□ 0.4
TMEM258-207ENST00000543510 CDAN1Q8IWY9 1227 aa17.56■□□□□ 0.4
TMEM258-207ENST00000543510 GTF3C6Q969F1 213 aa17.56■□□□□ 0.4
TMEM258-207ENST00000543510 GPHNQ9NQX3 736 aaPredicted RBP17.56■□□□□ 0.4
TMEM258-207ENST00000543510 IFIT3O14879 490 aaKnown RBP17.55■□□□□ 0.4
TMEM258-207ENST00000543510 TSPY3P0CV98 308 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 TSPY8P0CW00 308 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 PCP11498 1178 aaKnown RBP17.55■□□□□ 0.4
TMEM258-207ENST00000543510 PTMSP20962 102 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 TFAP4Q01664 338 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 ZNF274Q96GC6 653 aaPredicted RBP17.55■□□□□ 0.4
TMEM258-207ENST00000543510 UBAC1Q9BSL1 405 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 DEFB129Q9H1M3 183 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 CLEC11AQ9Y240 323 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 ERICH2A1L162 156 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 MPHOSPH10O00566 681 aaKnown RBP17.55■□□□□ 0.4
TMEM258-207ENST00000543510 ORC4O43929 436 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 EVCP57679 992 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 PRAMEF18Q5VWM3 479 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 MIGA2Q7L4E1 593 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 DCPSQ96C86 337 aaKnown RBP17.55■□□□□ 0.4
TMEM258-207ENST00000543510 CHMP4CQ96CF2 233 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.55■□□□□ 0.4
TMEM258-207ENST00000543510 RRAGCQ9HB90 399 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 SWAP70Q9UH65 585 aa17.55■□□□□ 0.4
TMEM258-207ENST00000543510 WDR90Q96KV7 1748 aa17.54■□□□□ 0.4
TMEM258-207ENST00000543510 GOLGA6L22H0YM25 854 aa17.54■□□□□ 0.4
TMEM258-207ENST00000543510 PDIA4P13667 645 aaKnown RBP17.54■□□□□ 0.4
TMEM258-207ENST00000543510 RASA1P20936 1047 aa17.54■□□□□ 0.4
TMEM258-207ENST00000543510 SYT1P21579 422 aa17.54■□□□□ 0.4
TMEM258-207ENST00000543510 SART3Q15020 963 aaKnown RBP17.54■□□□□ 0.4
TMEM258-207ENST00000543510 TMEM67Q5HYA8 995 aa17.54■□□□□ 0.4
TMEM258-207ENST00000543510 NFXL1Q6ZNB6 911 aa17.54■□□□□ 0.4
TMEM258-207ENST00000543510 USP50Q70EL3 339 aaPredicted RBP17.54■□□□□ 0.4
TMEM258-207ENST00000543510 IQCA1Q86XH1 822 aa17.54■□□□□ 0.4
TMEM258-207ENST00000543510 FOXP4Q8IVH2 680 aaPredicted RBP17.54■□□□□ 0.4
TMEM258-207ENST00000543510 TAF1DQ9H5J8 278 aaPredicted RBP17.54■□□□□ 0.4
TMEM258-207ENST00000543510 ATRNL1Q5VV63 1379 aa17.53■□□□□ 0.4
TMEM258-207ENST00000543510 STX6O43752 255 aa17.53■□□□□ 0.4
TMEM258-207ENST00000543510 NMT2O60551 498 aa17.53■□□□□ 0.4
TMEM258-207ENST00000543510 FGRP09769 529 aa17.53■□□□□ 0.4
TMEM258-207ENST00000543510 GABPAQ06546 454 aa17.53■□□□□ 0.4
TMEM258-207ENST00000543510 FOXD4L5Q5VV16 416 aaPredicted RBP17.53■□□□□ 0.4
TMEM258-207ENST00000543510 FOXD4L4Q8WXT5 416 aaPredicted RBP17.53■□□□□ 0.4
TMEM258-207ENST00000543510 LLPHQ9BRT6 129 aaKnown RBP17.53■□□□□ 0.4
TMEM258-207ENST00000543510 EHD4Q9H223 541 aa17.53■□□□□ 0.4
TMEM258-207ENST00000543510 COL2A1P02458 1487 aaPredicted RBP17.53■□□□□ 0.4
TMEM258-207ENST00000543510 PDIA3P30101 505 aaKnown RBP17.52■□□□□ 0.4
TMEM258-207ENST00000543510 SHMT1P34896 483 aa17.52■□□□□ 0.4
TMEM258-207ENST00000543510 SCRN1Q12765 414 aa17.52■□□□□ 0.4
TMEM258-207ENST00000543510 SULF1Q8IWU6 871 aa17.52■□□□□ 0.4
TMEM258-207ENST00000543510 DNAJC18Q9H819 358 aa17.52■□□□□ 0.4
TMEM258-207ENST00000543510 TNKSO95271 1327 aa17.52■□□□□ 0.4
TMEM258-207ENST00000543510 POTECB2RU33 542 aa17.52■□□□□ 0.39
TMEM258-207ENST00000543510 ZSCAN22P10073 491 aaPredicted RBP17.52■□□□□ 0.39
TMEM258-207ENST00000543510 AKR1B1P15121 316 aa17.52■□□□□ 0.39
TMEM258-207ENST00000543510 PDCP20941 246 aa17.52■□□□□ 0.39
TMEM258-207ENST00000543510 WTAPQ15007 396 aa17.52■□□□□ 0.39
TMEM258-207ENST00000543510 CERKLQ49MI3 558 aaPredicted RBP17.52■□□□□ 0.39
TMEM258-207ENST00000543510 NBPF12Q5TAG4 269 aaPredicted RBP17.52■□□□□ 0.39
TMEM258-207ENST00000543510 RAB11FIP4Q86YS3 637 aa17.52■□□□□ 0.39
TMEM258-207ENST00000543510 TMEM87BQ96K49 555 aa17.52■□□□□ 0.39
TMEM258-207ENST00000543510 ZSCAN10Q96SZ4 725 aaPredicted RBP17.52■□□□□ 0.39
TMEM258-207ENST00000543510 ADM5C9JUS6 153 aa17.51■□□□□ 0.39
TMEM258-207ENST00000543510 SH2B2O14492 632 aaPredicted RBP17.51■□□□□ 0.39
TMEM258-207ENST00000543510 GDF11O95390 407 aa17.51■□□□□ 0.39
TMEM258-207ENST00000543510 LARP1BQ659C4 914 aaKnown RBP17.51■□□□□ 0.39
TMEM258-207ENST00000543510 SENP2Q9HC62 589 aa17.51■□□□□ 0.39
TMEM258-207ENST00000543510 ANGEL1Q9UNK9 670 aaKnown RBP17.51■□□□□ 0.39
TMEM258-207ENST00000543510 KLF18A0A0U1RQI7 1052 aa17.5■□□□□ 0.39
TMEM258-207ENST00000543510 CCDC69A6NI79 296 aa17.5■□□□□ 0.39
TMEM258-207ENST00000543510 TRAK2O60296 914 aa17.5■□□□□ 0.39
TMEM258-207ENST00000543510 MCTP1Q6DN14 999 aa17.5■□□□□ 0.39
TMEM258-207ENST00000543510 DLK2Q6UY11 383 aa17.5■□□□□ 0.39
TMEM258-207ENST00000543510 PNMA8AQ86V59 439 aaPredicted RBP17.5■□□□□ 0.39
TMEM258-207ENST00000543510 IGDCC4Q8TDY8 1250 aa17.5■□□□□ 0.39
TMEM258-207ENST00000543510 TEPSINQ96N21 525 aa17.5■□□□□ 0.39
TMEM258-207ENST00000543510 HERC5Q9UII4 1024 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms