RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 MAPKAPK5Q8IW41 473 aa22.75■■□□□ 1.23
LTBR-211ENST00000543190 U2AF1L4Q8WU68 220 aaKnown RBP22.75■■□□□ 1.23
LTBR-211ENST00000543190 CCDC8Q9H0W5 538 aaPredicted RBP22.75■■□□□ 1.23
LTBR-211ENST00000543190 GJD2Q9UKL4 321 aa22.75■■□□□ 1.23
LTBR-211ENST00000543190 ZBTB21Q9ULJ3 1066 aa22.75■■□□□ 1.23
LTBR-211ENST00000543190 USP17L10C9JJH3 530 aa22.74■■□□□ 1.23
LTBR-211ENST00000543190 HLA-DOAP06340 250 aa22.74■■□□□ 1.23
LTBR-211ENST00000543190 CYP7A1P22680 504 aa22.74■■□□□ 1.23
LTBR-211ENST00000543190 JAG1P78504 1218 aa22.74■■□□□ 1.23
LTBR-211ENST00000543190 MAP3K12Q12852 859 aa22.74■■□□□ 1.23
LTBR-211ENST00000543190 CRISPLD2Q9H0B8 497 aa22.74■■□□□ 1.23
LTBR-211ENST00000543190 TTF1Q15361 905 aaPredicted RBP22.73■■□□□ 1.23
LTBR-211ENST00000543190 CRACR2BQ8N4Y2 399 aaPredicted RBP22.73■■□□□ 1.23
LTBR-211ENST00000543190 GTF3C2Q8WUA4 911 aaPredicted RBP22.73■■□□□ 1.23
LTBR-211ENST00000543190 C12orf42Q96LP6 360 aa22.73■■□□□ 1.23
LTBR-211ENST00000543190 UNC93B1Q9H1C4 597 aa22.73■■□□□ 1.23
LTBR-211ENST00000543190 IDH1O75874 414 aaKnown RBP22.72■■□□□ 1.23
LTBR-211ENST00000543190 MYCP01106 439 aaPredicted RBP22.72■■□□□ 1.23
LTBR-211ENST00000543190 INHAP05111 366 aa22.72■■□□□ 1.23
LTBR-211ENST00000543190 MTMR2Q13614 643 aa22.72■■□□□ 1.23
LTBR-211ENST00000543190 RHPN1Q8TCX5 695 aa22.72■■□□□ 1.23
LTBR-211ENST00000543190 PANK1Q8TE04 598 aa22.72■■□□□ 1.23
LTBR-211ENST00000543190 RIOK1Q9BRS2 568 aaKnown RBP22.72■■□□□ 1.23
LTBR-211ENST00000543190 HTATIP2Q9BUP3 242 aa22.72■■□□□ 1.23
LTBR-211ENST00000543190 ZBTB40Q9NUA8 1239 aa22.72■■□□□ 1.23
LTBR-211ENST00000543190 TMOD4Q9NZQ9 345 aa22.72■■□□□ 1.23
LTBR-211ENST00000543190 BIN2Q9UBW5 565 aaPredicted RBP22.72■■□□□ 1.23
LTBR-211ENST00000543190 SERPINB13Q9UIV8 391 aa22.72■■□□□ 1.23
LTBR-211ENST00000543190 DDX19BQ9UMR2 479 aa22.72■■□□□ 1.23
LTBR-211ENST00000543190 EXOC6BQ9Y2D4 811 aa22.72■■□□□ 1.23
LTBR-211ENST00000543190 NAV1Q8NEY1 1877 aa22.72■■□□□ 1.23
LTBR-211ENST00000543190 MYH7P12883 1935 aa22.71■■□□□ 1.23
LTBR-211ENST00000543190 DYNLL1P63167 89 aaKnown RBP22.71■■□□□ 1.23
LTBR-211ENST00000543190 AACSQ86V21 672 aa22.71■■□□□ 1.23
LTBR-211ENST00000543190 MAGEB6Q8N7X4 407 aa22.71■■□□□ 1.23
LTBR-211ENST00000543190 XRCC5P13010 732 aaKnown RBP22.7■■□□□ 1.22
LTBR-211ENST00000543190 ELNP15502 786 aa22.7■■□□□ 1.22
LTBR-211ENST00000543190 TTC6Q86TZ1 520 aa22.7■■□□□ 1.22
LTBR-211ENST00000543190 KIF1BPQ96EK5 621 aa22.7■■□□□ 1.22
LTBR-211ENST00000543190 TRIM34Q9BYJ4 488 aa22.7■■□□□ 1.22
LTBR-211ENST00000543190 CHMP4BQ9H444 224 aaKnown RBP22.7■■□□□ 1.22
LTBR-211ENST00000543190 ANTXR1Q9H6X2 564 aa22.7■■□□□ 1.22
LTBR-211ENST00000543190 ALPK3Q96L96 1907 aa22.7■■□□□ 1.22
LTBR-211ENST00000543190 MYH8P13535 1937 aa22.69■■□□□ 1.22
LTBR-211ENST00000543190 H0YGN5 161 aa22.69■■□□□ 1.22
LTBR-211ENST00000543190 HMMRO75330 724 aa22.69■■□□□ 1.22
LTBR-211ENST00000543190 ECM2O94769 699 aaPredicted RBP22.69■■□□□ 1.22
LTBR-211ENST00000543190 HMGCRP04035 888 aa22.69■■□□□ 1.22
LTBR-211ENST00000543190 HERVK_113P62684 666 aa22.69■■□□□ 1.22
LTBR-211ENST00000543190 IRX3P78415 501 aaPredicted RBP22.69■■□□□ 1.22
LTBR-211ENST00000543190 ANKLE1Q8NAG6 615 aa22.69■■□□□ 1.22
LTBR-211ENST00000543190 FARP2O94887 1054 aaPredicted RBP22.68■■□□□ 1.22
LTBR-211ENST00000543190 FXR1P51114 621 aaKnown RBP eCLIP22.68■■□□□ 1.22
LTBR-211ENST00000543190 LBX2Q6XYB7 198 aa22.68■■□□□ 1.22
LTBR-211ENST00000543190 SIRT2Q8IXJ6 389 aa22.68■■□□□ 1.22
LTBR-211ENST00000543190 CLASRPQ8N2M8 674 aaKnown RBP22.68■■□□□ 1.22
LTBR-211ENST00000543190 P2RX7Q99572 595 aaKnown RBP22.68■■□□□ 1.22
LTBR-211ENST00000543190 KIAA1683Q9H0B3 1180 aa22.68■■□□□ 1.22
LTBR-211ENST00000543190 EMILIN3Q9NT22 766 aa22.68■■□□□ 1.22
LTBR-211ENST00000543190 RAB11FIP3O75154 756 aa22.67■■□□□ 1.22
LTBR-211ENST00000543190 GABPAQ06546 454 aa22.67■■□□□ 1.22
LTBR-211ENST00000543190 MAP3K21Q5TCX8 1036 aa22.67■■□□□ 1.22
LTBR-211ENST00000543190 USP17L2Q6R6M4 530 aa22.67■■□□□ 1.22
LTBR-211ENST00000543190 MIGA1Q8NAN2 632 aa22.67■■□□□ 1.22
LTBR-211ENST00000543190 GPRC5AQ8NFJ5 357 aa22.67■■□□□ 1.22
LTBR-211ENST00000543190 SOCS4Q8WXH5 440 aa22.67■■□□□ 1.22
LTBR-211ENST00000543190 PRO3102Q9H379 93 aa22.67■■□□□ 1.22
LTBR-211ENST00000543190 RBPJLQ9UBG7 517 aa22.67■■□□□ 1.22
LTBR-211ENST00000543190 COLQQ9Y215 455 aaPredicted RBP22.67■■□□□ 1.22
LTBR-211ENST00000543190 RPTORQ8N122 1335 aa22.66■■□□□ 1.22
LTBR-211ENST00000543190 GDF11O95390 407 aa22.66■■□□□ 1.22
LTBR-211ENST00000543190 MAPK4P31152 587 aa22.66■■□□□ 1.22
LTBR-211ENST00000543190 USP5P45974 858 aa22.66■■□□□ 1.22
LTBR-211ENST00000543190 USP14P54578 494 aa22.66■■□□□ 1.22
LTBR-211ENST00000543190 TRMT44Q8IYL2 757 aaKnown RBP22.66■■□□□ 1.22
LTBR-211ENST00000543190 USP6NLQ92738 828 aa22.66■■□□□ 1.22
LTBR-211ENST00000543190 SAP30BPQ9UHR5 308 aaKnown RBP22.66■■□□□ 1.22
LTBR-211ENST00000543190 SZT2Q5T011 3432 aa22.66■■□□□ 1.22
LTBR-211ENST00000543190 RLFQ13129 1914 aa22.65■■□□□ 1.22
LTBR-211ENST00000543190 TCRBV5S4A2TA0A5A2 114 aa22.65■■□□□ 1.22
LTBR-211ENST00000543190 GH2P01242 217 aa22.65■■□□□ 1.22
LTBR-211ENST00000543190 SHROOM1Q2M3G4 852 aaPredicted RBP22.65■■□□□ 1.22
LTBR-211ENST00000543190 POTEEQ6S8J3 1075 aa22.65■■□□□ 1.22
LTBR-211ENST00000543190 DEFB118Q96PH6 123 aa22.65■■□□□ 1.22
LTBR-211ENST00000543190 TXNRD2Q9NNW7 524 aa22.65■■□□□ 1.22
LTBR-211ENST00000543190 NR2E3Q9Y5X4 410 aa22.65■■□□□ 1.22
LTBR-211ENST00000543190 PDE6AP16499 860 aa22.64■■□□□ 1.21
LTBR-211ENST00000543190 SHMT1P34896 483 aa22.64■■□□□ 1.21
LTBR-211ENST00000543190 ERVK-9P63128 1117 aa22.64■■□□□ 1.21
LTBR-211ENST00000543190 ERVK-24P63145 666 aa22.64■■□□□ 1.21
LTBR-211ENST00000543190 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.64■■□□□ 1.214e-7■□□□□ 8.7
LTBR-211ENST00000543190 IL1RAPL2Q9NP60 686 aa22.64■■□□□ 1.21
LTBR-211ENST00000543190 RABGAP1Q9Y3P9 1069 aa22.64■■□□□ 1.21
LTBR-211ENST00000543190 NDUFB9Q9Y6M9 179 aa22.64■■□□□ 1.21
LTBR-211ENST00000543190 MAGEB6P1A0A0J9YX57 407 aa22.63■■□□□ 1.21
LTBR-211ENST00000543190 CERKLQ49MI3 558 aaPredicted RBP22.63■■□□□ 1.21
LTBR-211ENST00000543190 SLC9C2Q5TAH2 1124 aa22.63■■□□□ 1.21
LTBR-211ENST00000543190 NUDT12Q9BQG2 462 aa22.63■■□□□ 1.21
LTBR-211ENST00000543190 CRNKL1Q9BZJ0 848 aaKnown RBP22.63■■□□□ 1.21
LTBR-211ENST00000543190 BAZ2AQ9UIF9 1905 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms