RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 ZNF594Q96JF6 807 aaPredicted RBP6.04□□□□□ -1.44
KDM3B-209ENST00000542866 DRC1Q96MC2 740 aa6.04□□□□□ -1.44
KDM3B-209ENST00000542866 CDC23Q9UJX2 597 aa6.04□□□□□ -1.44
KDM3B-209ENST00000542866 HPS5Q9UPZ3 1129 aa6.04□□□□□ -1.44
KDM3B-209ENST00000542866 NIP7Q9Y221 180 aaKnown RBP eCLIP6.04□□□□□ -1.44
KDM3B-209ENST00000542866 ZBTB1Q9Y2K1 713 aa6.04□□□□□ -1.44
KDM3B-209ENST00000542866 LRRC37A3O60309 1634 aa6.04□□□□□ -1.44
KDM3B-209ENST00000542866 COL16A1Q07092 1604 aaPredicted RBP6.04□□□□□ -1.44
KDM3B-209ENST00000542866 EIF3CLB5ME19 914 aaKnown RBP6.04□□□□□ -1.44
KDM3B-209ENST00000542866 ZNF213O14771 459 aa6.04□□□□□ -1.44
KDM3B-209ENST00000542866 TEX33O43247 280 aa6.04□□□□□ -1.44
KDM3B-209ENST00000542866 BMP6P22004 513 aa6.04□□□□□ -1.44
KDM3B-209ENST00000542866 METAP2P50579 478 aaKnown RBP eCLIP6.04□□□□□ -1.446e-6■□□□□ 10.3
KDM3B-209ENST00000542866 AKAP17AQ02040 695 aaKnown RBP6.04□□□□□ -1.44
KDM3B-209ENST00000542866 TBX2Q13207 712 aaPredicted RBP6.04□□□□□ -1.44
KDM3B-209ENST00000542866 TTC39AQ5SRH9 613 aa6.04□□□□□ -1.44
KDM3B-209ENST00000542866 CPLX2Q6PUV4 134 aaKnown RBP6.04□□□□□ -1.44
KDM3B-209ENST00000542866 NBPF5PQ86XG9 351 aaPredicted RBP6.04□□□□□ -1.44
KDM3B-209ENST00000542866 EIF3CQ99613 913 aaKnown RBP6.04□□□□□ -1.44
KDM3B-209ENST00000542866 SERTAD1Q9UHV2 236 aa6.04□□□□□ -1.44
KDM3B-209ENST00000542866 MAN1B1Q9UKM7 699 aa6.04□□□□□ -1.44
KDM3B-209ENST00000542866 ABCC6O95255 1503 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 NHSL1Q5SYE7 1610 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 CTAGE15A4D2H0 777 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 CTAGE9A4FU28 777 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 POTEB2H3BUK9 544 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 POLR2DO15514 142 aaKnown RBP6.03□□□□□ -1.44
KDM3B-209ENST00000542866 PRR29P0C7W0 189 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 CTAGE8P0CG41 777 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 IL6STP40189 918 aaPredicted RBP6.03□□□□□ -1.44
KDM3B-209ENST00000542866 VSNL1P62760 191 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 RBL2Q08999 1139 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 CASP8Q14790 479 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 TXNRD1Q16881 649 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 RAD9BQ6WBX8 426 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 CTAGE6Q86UF2 777 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 CTAGE4Q8IX94 777 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 SLC35F6Q8N357 371 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 CCDC82Q8N4S0 544 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 IGSF22Q8N9C0 903 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 FLAD1Q8NFF5 587 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 PLBD2Q8NHP8 589 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 CDC5LQ99459 802 aaKnown RBP6.03□□□□□ -1.44
KDM3B-209ENST00000542866 HPSEQ9Y251 543 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 COL14A1Q05707 1796 aaKnown RBP6.03□□□□□ -1.44
KDM3B-209ENST00000542866 PPP6R2O75170 966 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 POSTNQ15063 836 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 LRRC24Q50LG9 513 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 SLC27A3Q5K4L6 730 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 RESP18Q5W5W9 173 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 ICE2Q659A1 982 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 GDAP1L1Q96MZ0 367 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 CCDC85AQ96PX6 553 aaPredicted RBP6.03□□□□□ -1.44
KDM3B-209ENST00000542866 MYL10Q9BUA6 226 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.03□□□□□ -1.44
KDM3B-209ENST00000542866 ACBD3Q9H3P7 528 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 DACH1Q9UI36 760 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 DENND2AQ9ULE3 1009 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 L1RE1Q9UN81 338 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 ADGRG1Q9Y653 693 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 COBLO75128 1261 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 IARSP41252 1262 aaKnown RBP6.03□□□□□ -1.44
KDM3B-209ENST00000542866 MAGEA9P43362 315 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 ANTXR2P58335 489 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 EN1Q05925 392 aaPredicted RBP6.03□□□□□ -1.44
KDM3B-209ENST00000542866 CCDC57Q2TAC2 916 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 CTR9Q6PD62 1173 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 PACS2Q86VP3 889 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 KRI1Q8N9T8 703 aaKnown RBP6.03□□□□□ -1.44
KDM3B-209ENST00000542866 ACRBPQ8NEB7 543 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 FAM204AQ9H8W3 233 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 AKAP2Q9Y2D5 859 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 JRKLQ9Y4A0 524 aa6.03□□□□□ -1.44
KDM3B-209ENST00000542866 LRP6O75581 1613 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 RFX7Q2KHR2 1363 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.02□□□□□ -1.45
KDM3B-209ENST00000542866 G3V3G9 751 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 UBE2Q2LH0YL09 131 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 MYO1BO43795 1136 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 AFMP43652 599 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 GRIN1Q05586 938 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 PTPAQ15257 358 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 SLC9C2Q5TAH2 1124 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 DCAF8Q5TAQ9 597 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 SLC26A6Q9BXS9 759 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 GBP3Q9H0R5 595 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 ALS2Q96Q42 1657 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 TRPM3Q9HCF6 1732 aaPredicted RBP6.02□□□□□ -1.45
KDM3B-209ENST00000542866 N4BP2Q86UW6 1770 aaPredicted RBP6.02□□□□□ -1.45
KDM3B-209ENST00000542866 CDKL5O76039 1030 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 ABL1P00519 1130 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 CASP14P31944 242 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 LRRC31Q6UY01 552 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 TPTE2Q6XPS3 522 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 TTLL7Q6ZT98 887 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 MB21D2Q8IYB1 491 aaPredicted RBP6.02□□□□□ -1.45
KDM3B-209ENST00000542866 MICALL1Q8N3F8 863 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 GPATCH11Q8N954 259 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 IQUBQ8NA54 791 aa6.02□□□□□ -1.45
KDM3B-209ENST00000542866 MLKLQ8NB16 471 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms