RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 CERKLQ49MI3 558 aaPredicted RBP16.95■□□□□ 0.3
DDX11-221ENST00000542661 IFNL3Q8IZI9 196 aa16.95■□□□□ 0.3
DDX11-221ENST00000542661 RNF186Q9NXI6 227 aa16.95■□□□□ 0.3
DDX11-221ENST00000542661 AFG3L2Q9Y4W6 797 aa16.95■□□□□ 0.3
DDX11-221ENST00000542661 CCL15-CCL14A0A0B4J2E2 113 aa16.94■□□□□ 0.3
DDX11-221ENST00000542661 USP17L5A8MUK1 530 aa16.94■□□□□ 0.3
DDX11-221ENST00000542661 FOXN1O15353 648 aa16.94■□□□□ 0.3
DDX11-221ENST00000542661 SHMT1P34896 483 aa16.94■□□□□ 0.3
DDX11-221ENST00000542661 RRP1BQ14684 758 aaKnown RBP16.94■□□□□ 0.3
DDX11-221ENST00000542661 CCL15Q16663 113 aa16.94■□□□□ 0.3
DDX11-221ENST00000542661 CCDC129Q6ZRS4 1044 aa16.94■□□□□ 0.3
DDX11-221ENST00000542661 IFNL1Q8IU54 200 aa16.94■□□□□ 0.3
DDX11-221ENST00000542661 NAPBQ9H115 298 aa16.94■□□□□ 0.3
DDX11-221ENST00000542661 AS3MTQ9HBK9 375 aa16.94■□□□□ 0.3
DDX11-221ENST00000542661 EPB41L4AQ9HCS5 686 aaPredicted RBP16.94■□□□□ 0.3
DDX11-221ENST00000542661 CCDC171Q6TFL3 1326 aa16.94■□□□□ 0.3
DDX11-221ENST00000542661 ATAD5Q96QE3 1844 aa16.93■□□□□ 0.3
DDX11-221ENST00000542661 CYP2D7A0A087X1C5 515 aa16.93■□□□□ 0.3
DDX11-221ENST00000542661 TRPA1O75762 1119 aa16.93■□□□□ 0.3
DDX11-221ENST00000542661 ABCB5Q2M3G0 1257 aa16.93■□□□□ 0.3
DDX11-221ENST00000542661 CWC27Q6UX04 472 aaKnown RBP16.93■□□□□ 0.3
DDX11-221ENST00000542661 C16orf86Q6ZW13 317 aa16.93■□□□□ 0.3
DDX11-221ENST00000542661 ZNF280CQ8ND82 737 aa16.93■□□□□ 0.3
DDX11-221ENST00000542661 BRI3BPQ8WY22 251 aa16.93■□□□□ 0.3
DDX11-221ENST00000542661 ZNF287Q9HBT7 754 aa16.93■□□□□ 0.3
DDX11-221ENST00000542661 ZCCHC17Q9NP64 241 aaKnown RBP16.93■□□□□ 0.3
DDX11-221ENST00000542661 CABP5Q9NP86 173 aa16.93■□□□□ 0.3
DDX11-221ENST00000542661 ZBTB21Q9ULJ3 1066 aa16.93■□□□□ 0.3
DDX11-221ENST00000542661 MINDY4BA8MYZ0 360 aa16.92■□□□□ 0.3
DDX11-221ENST00000542661 GDF11O95390 407 aa16.92■□□□□ 0.3
DDX11-221ENST00000542661 GH2P01242 217 aa16.92■□□□□ 0.3
DDX11-221ENST00000542661 SLC3A2P08195 630 aaKnown RBP16.92■□□□□ 0.3
DDX11-221ENST00000542661 ALX1Q15699 326 aa16.92■□□□□ 0.3
DDX11-221ENST00000542661 FASTKD5Q7L8L6 764 aaKnown RBP16.92■□□□□ 0.3
DDX11-221ENST00000542661 RUFY2Q8WXA3 655 aa16.92■□□□□ 0.3
DDX11-221ENST00000542661 CCDC17Q96LX7 622 aa16.92■□□□□ 0.3
DDX11-221ENST00000542661 WDR18Q9BV38 432 aa16.92■□□□□ 0.3
DDX11-221ENST00000542661 CFHR5Q9BXR6 569 aa16.92■□□□□ 0.3
DDX11-221ENST00000542661 ROBO3Q96MS0 1386 aa16.91■□□□□ 0.3
DDX11-221ENST00000542661 A0A0G2JLL6 359 aaPredicted RBP16.91■□□□□ 0.3
DDX11-221ENST00000542661 TRIM75PA6NK02 468 aa16.91■□□□□ 0.3
DDX11-221ENST00000542661 IGF2BP3O00425 579 aaKnown RBP eCLIP16.91■□□□□ 0.3
DDX11-221ENST00000542661 CDK8P49336 464 aa16.91■□□□□ 0.3
DDX11-221ENST00000542661 EVX2Q03828 476 aa16.91■□□□□ 0.3
DDX11-221ENST00000542661 PRRT2Q7Z6L0 340 aaPredicted RBP16.91■□□□□ 0.3
DDX11-221ENST00000542661 TNS4Q8IZW8 715 aa16.91■□□□□ 0.3
DDX11-221ENST00000542661 DYNLL2Q96FJ2 89 aa16.91■□□□□ 0.3
DDX11-221ENST00000542661 PTPN18Q99952 460 aa16.91■□□□□ 0.3
DDX11-221ENST00000542661 PHIPQ8WWQ0 1821 aa16.91■□□□□ 0.3
DDX11-221ENST00000542661 MYH8P13535 1937 aa16.9■□□□□ 0.3
DDX11-221ENST00000542661 HSPD1P10809 573 aaKnown RBP16.9■□□□□ 0.3
DDX11-221ENST00000542661 HSPA8P11142 646 aaKnown RBP16.9■□□□□ 0.3
DDX11-221ENST00000542661 JAG1P78504 1218 aa16.9■□□□□ 0.3
DDX11-221ENST00000542661 SPP2Q13103 211 aa16.9■□□□□ 0.3
DDX11-221ENST00000542661 BMP2KLQ5H9B9 411 aa16.9■□□□□ 0.3
DDX11-221ENST00000542661 VPS53Q5VIR6 699 aa16.9■□□□□ 0.3
DDX11-221ENST00000542661 ZNF589Q86UQ0 364 aaPredicted RBP16.9■□□□□ 0.3
DDX11-221ENST00000542661 SLC44A5Q8NCS7 719 aa16.9■□□□□ 0.3
DDX11-221ENST00000542661 MKNK2Q9HBH9 465 aa16.9■□□□□ 0.3
DDX11-221ENST00000542661 ZMYM6O95789 1325 aa16.9■□□□□ 0.3
DDX11-221ENST00000542661 MPHOSPH10O00566 681 aaKnown RBP16.89■□□□□ 0.29
DDX11-221ENST00000542661 FOXP2O15409 715 aa16.89■□□□□ 0.29
DDX11-221ENST00000542661 CHMLP26374 656 aa16.89■□□□□ 0.29
DDX11-221ENST00000542661 PDE4BQ07343 736 aa16.89■□□□□ 0.29
DDX11-221ENST00000542661 RAB3GAP1Q15042 981 aa16.89■□□□□ 0.29
DDX11-221ENST00000542661 TMEM179Q6ZVK1 233 aa16.89■□□□□ 0.29
DDX11-221ENST00000542661 ANKRD23Q86SG2 305 aa16.89■□□□□ 0.29
DDX11-221ENST00000542661 PRDM10Q9NQV6 1147 aa16.89■□□□□ 0.29
DDX11-221ENST00000542661 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.89■□□□□ 0.29
DDX11-221ENST00000542661 RAD50Q92878 1312 aa16.89■□□□□ 0.29
DDX11-221ENST00000542661 C19orf81C9J6K1 198 aa16.88■□□□□ 0.29
DDX11-221ENST00000542661 BTBD19C9JJ37 291 aa16.88■□□□□ 0.29
DDX11-221ENST00000542661 FGAP02671 866 aa16.88■□□□□ 0.29
DDX11-221ENST00000542661 LBX1P52954 281 aa16.88■□□□□ 0.29
DDX11-221ENST00000542661 BACE1P56817 501 aa16.88■□□□□ 0.29
DDX11-221ENST00000542661 PPARAQ07869 468 aa16.88■□□□□ 0.29
DDX11-221ENST00000542661 NOM1Q5C9Z4 860 aaKnown RBP16.88■□□□□ 0.29
DDX11-221ENST00000542661 CCDC84Q86UT8 332 aaPredicted RBP16.88■□□□□ 0.29
DDX11-221ENST00000542661 FAM43AQ8N2R8 423 aa16.88■□□□□ 0.29
DDX11-221ENST00000542661 PROCA1Q8NCQ7 364 aaPredicted RBP16.88■□□□□ 0.29
DDX11-221ENST00000542661 USP17L10C9JJH3 530 aa16.87■□□□□ 0.29
DDX11-221ENST00000542661 SMIM22K7EJ46 135 aa16.87■□□□□ 0.29
DDX11-221ENST00000542661 TBC1D8O95759 1140 aa16.87■□□□□ 0.29
DDX11-221ENST00000542661 MOGSQ13724 837 aa16.87■□□□□ 0.29
DDX11-221ENST00000542661 SHROOM1Q2M3G4 852 aaPredicted RBP16.87■□□□□ 0.29
DDX11-221ENST00000542661 SH3D19Q5HYK7 790 aa16.87■□□□□ 0.29
DDX11-221ENST00000542661 GADL1Q6ZQY3 521 aa16.87■□□□□ 0.29
DDX11-221ENST00000542661 ZNF444Q8N0Y2 327 aaPredicted RBP16.87■□□□□ 0.29
DDX11-221ENST00000542661 ZFYVE28Q9HCC9 887 aa16.87■□□□□ 0.29
DDX11-221ENST00000542661 TMOD4Q9NZQ9 345 aa16.87■□□□□ 0.29
DDX11-221ENST00000542661 TSKSQ9UJT2 592 aa16.87■□□□□ 0.29
DDX11-221ENST00000542661 ANAPC4Q9UJX5 808 aa16.87■□□□□ 0.29
DDX11-221ENST00000542661 SLC45A1Q9Y2W3 748 aa16.87■□□□□ 0.29
DDX11-221ENST00000542661 PTPRFP10586 1907 aa16.87■□□□□ 0.29
DDX11-221ENST00000542661 PDHXO00330 501 aa16.86■□□□□ 0.29
DDX11-221ENST00000542661 USP14P54578 494 aa16.86■□□□□ 0.29
DDX11-221ENST00000542661 HMGCS2P54868 508 aa16.86■□□□□ 0.29
DDX11-221ENST00000542661 PABPC4Q13310 644 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDX11-221ENST00000542661 MTMR2Q13614 643 aa16.86■□□□□ 0.29
DDX11-221ENST00000542661 SEPT2Q15019 361 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms