RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 IPO8O15397 1037 aaKnown RBP18.99■□□□□ 0.63
CLSTN3-213ENST00000541953 HMGCRP04035 888 aa18.99■□□□□ 0.63
CLSTN3-213ENST00000541953 GCLCP48506 637 aaPredicted RBP18.99■□□□□ 0.63
CLSTN3-213ENST00000541953 BACE1P56817 501 aa18.99■□□□□ 0.63
CLSTN3-213ENST00000541953 WDR18Q9BV38 432 aa18.99■□□□□ 0.63
CLSTN3-213ENST00000541953 GPR108Q9NPR9 543 aa18.99■□□□□ 0.63
CLSTN3-213ENST00000541953 MORF4L1Q9UBU8 362 aa18.99■□□□□ 0.63
CLSTN3-213ENST00000541953 LAMA2P24043 3122 aaKnown RBP18.98■□□□□ 0.63
CLSTN3-213ENST00000541953 CCDC8Q9H0W5 538 aaPredicted RBP18.98■□□□□ 0.63
CLSTN3-213ENST00000541953 ZBTB21Q9ULJ3 1066 aa18.98■□□□□ 0.63
CLSTN3-213ENST00000541953 EVI5O60447 810 aa18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 SURF6O75683 361 aaKnown RBP18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 CYP2B6P20813 491 aa18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 HERVK_113P62684 666 aa18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 ATP8B2P98198 1209 aa18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 ZKSCAN2Q63HK3 967 aa18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 MIGA1Q8NAN2 632 aa18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 EAF2Q96CJ1 260 aaPredicted RBP18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 LRCH3Q96II8 777 aa18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 TBC1D2Q9BYX2 928 aa18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 PORCNQ9H237 461 aa18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 AS3MTQ9HBK9 375 aa18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 STAP2Q9UGK3 403 aa18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 NR2E3Q9Y5X4 410 aa18.97■□□□□ 0.63
CLSTN3-213ENST00000541953 ASNSP08243 561 aa18.96■□□□□ 0.63
CLSTN3-213ENST00000541953 PABPC4Q13310 644 aaKnown RBP eCLIP18.96■□□□□ 0.63
CLSTN3-213ENST00000541953 OS9Q13438 667 aaPredicted RBP18.96■□□□□ 0.63
CLSTN3-213ENST00000541953 Q3C1V9 767 aa18.96■□□□□ 0.63
CLSTN3-213ENST00000541953 NOL10Q9BSC4 688 aaKnown RBP18.96■□□□□ 0.63
CLSTN3-213ENST00000541953 DHX36Q9H2U1 1008 aaKnown RBP18.96■□□□□ 0.63
CLSTN3-213ENST00000541953 ANTXR1Q9H6X2 564 aa18.96■□□□□ 0.63
CLSTN3-213ENST00000541953 EMILIN3Q9NT22 766 aa18.96■□□□□ 0.63
CLSTN3-213ENST00000541953 RBPJLQ9UBG7 517 aa18.96■□□□□ 0.63
CLSTN3-213ENST00000541953 FRMPD3Q5JV73 1810 aa18.95■□□□□ 0.62
CLSTN3-213ENST00000541953 BAG3O95817 575 aa18.95■□□□□ 0.62
CLSTN3-213ENST00000541953 CYP7A1P22680 504 aa18.95■□□□□ 0.62
CLSTN3-213ENST00000541953 HOXA7P31268 230 aaPredicted RBP18.95■□□□□ 0.62
CLSTN3-213ENST00000541953 IRX3P78415 501 aaPredicted RBP18.95■□□□□ 0.62
CLSTN3-213ENST00000541953 EVX2Q03828 476 aa18.95■□□□□ 0.62
CLSTN3-213ENST00000541953 CCDC158Q5M9N0 1113 aa18.95■□□□□ 0.62
CLSTN3-213ENST00000541953 MAP3K21Q5TCX8 1036 aa18.95■□□□□ 0.62
CLSTN3-213ENST00000541953 C7orf61Q8IZ16 206 aa18.95■□□□□ 0.62
CLSTN3-213ENST00000541953 CRACR2BQ8N4Y2 399 aaPredicted RBP18.95■□□□□ 0.62
CLSTN3-213ENST00000541953 ZMYND8Q9ULU4 1186 aaPredicted RBP18.95■□□□□ 0.62
CLSTN3-213ENST00000541953 A0A0C4DFX4 3053 aa18.94■□□□□ 0.62
CLSTN3-213ENST00000541953 PLCG2P16885 1265 aa18.94■□□□□ 0.62
CLSTN3-213ENST00000541953 CCL14Q16627 93 aa18.94■□□□□ 0.62
CLSTN3-213ENST00000541953 NECAB2Q7Z6G3 386 aa18.94■□□□□ 0.62
CLSTN3-213ENST00000541953 ZNF512BQ96KM6 892 aaPredicted RBP18.94■□□□□ 0.62
CLSTN3-213ENST00000541953 NOP58Q9Y2X3 529 aaKnown RBP18.94■□□□□ 0.62
CLSTN3-213ENST00000541953 RPTORQ8N122 1335 aa18.94■□□□□ 0.62
CLSTN3-213ENST00000541953 NAV1Q8NEY1 1877 aa18.93■□□□□ 0.62
CLSTN3-213ENST00000541953 USP17L10C9JJH3 530 aa18.93■□□□□ 0.62
CLSTN3-213ENST00000541953 CNMDO75829 334 aa18.93■□□□□ 0.62
CLSTN3-213ENST00000541953 GH2P01242 217 aa18.93■□□□□ 0.62
CLSTN3-213ENST00000541953 PRKAR2AP13861 404 aaKnown RBP18.93■□□□□ 0.62
CLSTN3-213ENST00000541953 ZYXQ15942 572 aaKnown RBP18.93■□□□□ 0.62
CLSTN3-213ENST00000541953 USP6NLQ92738 828 aa18.93■□□□□ 0.62
CLSTN3-213ENST00000541953 PAGR1Q9BTK6 254 aa18.93■□□□□ 0.62
CLSTN3-213ENST00000541953 HMX1Q9NP08 348 aaPredicted RBP18.93■□□□□ 0.62
CLSTN3-213ENST00000541953 TMOD4Q9NZQ9 345 aa18.93■□□□□ 0.62
CLSTN3-213ENST00000541953 PFASO15067 1338 aa18.93■□□□□ 0.62
CLSTN3-213ENST00000541953 IDH1O75874 414 aaKnown RBP18.92■□□□□ 0.62
CLSTN3-213ENST00000541953 SYN1P17600 705 aa18.92■□□□□ 0.62
CLSTN3-213ENST00000541953 ERVK-9P63128 1117 aa18.92■□□□□ 0.62
CLSTN3-213ENST00000541953 ERVK-24P63145 666 aa18.92■□□□□ 0.62
CLSTN3-213ENST00000541953 FOXP4Q8IVH2 680 aaPredicted RBP18.92■□□□□ 0.62
CLSTN3-213ENST00000541953 ITPRIPQ8IWB1 547 aa18.92■□□□□ 0.62
CLSTN3-213ENST00000541953 MAGEB6Q8N7X4 407 aa18.92■□□□□ 0.62
CLSTN3-213ENST00000541953 OGDHLQ9ULD0 1010 aa18.92■□□□□ 0.62
CLSTN3-213ENST00000541953 CCND3P30281 292 aaPredicted RBP18.91■□□□□ 0.62
CLSTN3-213ENST00000541953 CACNB2Q08289 660 aaPredicted RBP18.91■□□□□ 0.62
CLSTN3-213ENST00000541953 GPRC5AQ8NFJ5 357 aa18.91■□□□□ 0.62
CLSTN3-213ENST00000541953 ACER1Q8TDN7 264 aa18.91■□□□□ 0.62
CLSTN3-213ENST00000541953 GDF15Q99988 308 aa18.91■□□□□ 0.62
CLSTN3-213ENST00000541953 EXOC6BQ9Y2D4 811 aa18.91■□□□□ 0.62
CLSTN3-213ENST00000541953 C19orf81C9J6K1 198 aa18.9■□□□□ 0.62
CLSTN3-213ENST00000541953 MORN1Q5T089 497 aa18.9■□□□□ 0.62
CLSTN3-213ENST00000541953 TATDN1Q6P1N9 297 aa18.9■□□□□ 0.62
CLSTN3-213ENST00000541953 CEP85Q6P2H3 762 aa18.9■□□□□ 0.62
CLSTN3-213ENST00000541953 GPR142Q7Z601 462 aa18.9■□□□□ 0.62
CLSTN3-213ENST00000541953 ANKLE1Q8NAG6 615 aa18.9■□□□□ 0.62
CLSTN3-213ENST00000541953 TRIM34Q9BYJ4 488 aa18.9■□□□□ 0.62
CLSTN3-213ENST00000541953 HLA-DOAP06340 250 aa18.89■□□□□ 0.61
CLSTN3-213ENST00000541953 SHMT1P34896 483 aa18.89■□□□□ 0.61
CLSTN3-213ENST00000541953 PLCD1P51178 756 aa18.89■□□□□ 0.61
CLSTN3-213ENST00000541953 NUDT12Q9BQG2 462 aa18.89■□□□□ 0.61
CLSTN3-213ENST00000541953 NBPF3Q9H094 633 aa18.89■□□□□ 0.61
CLSTN3-213ENST00000541953 FLRT1Q9NZU1 646 aa18.89■□□□□ 0.61
CLSTN3-213ENST00000541953 UNC80Q8N2C7 3258 aa18.88■□□□□ 0.61
CLSTN3-213ENST00000541953 GUCY1A2P33402 732 aa18.88■□□□□ 0.61
CLSTN3-213ENST00000541953 LHX8Q68G74 356 aa18.88■□□□□ 0.61
CLSTN3-213ENST00000541953 USP17L2Q6R6M4 530 aa18.88■□□□□ 0.61
CLSTN3-213ENST00000541953 FTSJ3Q8IY81 847 aaKnown RBP18.88■□□□□ 0.61
CLSTN3-213ENST00000541953 SOCS4Q8WXH5 440 aa18.88■□□□□ 0.61
CLSTN3-213ENST00000541953 C12orf42Q96LP6 360 aa18.88■□□□□ 0.61
CLSTN3-213ENST00000541953 RIOK1Q9BRS2 568 aaKnown RBP18.88■□□□□ 0.61
CLSTN3-213ENST00000541953 C11orf49Q9H6J7 331 aa18.88■□□□□ 0.61
CLSTN3-213ENST00000541953 A0A1W2PPC1 479 aa18.87■□□□□ 0.61
CLSTN3-213ENST00000541953 COL6A1P12109 1028 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms