RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 MAP3K10Q02779 954 aa12.28□□□□□ -0.44
CHFR-220ENST00000541817 MFSD14CQ5VZR4 134 aa12.28□□□□□ -0.44
CHFR-220ENST00000541817 PLEKHH3Q7Z736 793 aa12.28□□□□□ -0.44
CHFR-220ENST00000541817 EDC3Q96F86 508 aaKnown RBP12.28□□□□□ -0.44
CHFR-220ENST00000541817 PBX4Q9BYU1 374 aa12.28□□□□□ -0.44
CHFR-220ENST00000541817 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.28□□□□□ -0.44
CHFR-220ENST00000541817 CWC22Q9HCG8 908 aaKnown RBP12.28□□□□□ -0.44
CHFR-220ENST00000541817 KBTBD13C9JR72 458 aa12.27□□□□□ -0.45
CHFR-220ENST00000541817 MAPK4P31152 587 aa12.27□□□□□ -0.45
CHFR-220ENST00000541817 ERVK-9P63128 1117 aa12.27□□□□□ -0.45
CHFR-220ENST00000541817 ERVK-24P63145 666 aa12.27□□□□□ -0.45
CHFR-220ENST00000541817 MAP2K5Q13163 448 aa12.27□□□□□ -0.45
CHFR-220ENST00000541817 NCBP3Q53F19 620 aaKnown RBP12.27□□□□□ -0.45
CHFR-220ENST00000541817 WDR78Q5VTH9 848 aa12.27□□□□□ -0.45
CHFR-220ENST00000541817 NPLOC4Q8TAT6 608 aa12.27□□□□□ -0.45
CHFR-220ENST00000541817 KLHDC4Q8TBB5 520 aa12.27□□□□□ -0.45
CHFR-220ENST00000541817 MYH2Q9UKX2 1941 aa12.27□□□□□ -0.45
CHFR-220ENST00000541817 CHD9Q3L8U1 2897 aa12.26□□□□□ -0.45
CHFR-220ENST00000541817 ENTPD3O75355 529 aa12.26□□□□□ -0.45
CHFR-220ENST00000541817 RAG1P15918 1043 aa12.26□□□□□ -0.45
CHFR-220ENST00000541817 ATP2B2Q01814 1243 aa12.26□□□□□ -0.45
CHFR-220ENST00000541817 FPGSQ05932 587 aa12.26□□□□□ -0.45
CHFR-220ENST00000541817 MTMR2Q13614 643 aa12.26□□□□□ -0.45
CHFR-220ENST00000541817 SKIV2LQ15477 1246 aaKnown RBP12.26□□□□□ -0.45
CHFR-220ENST00000541817 WDR66Q8TBY9 1149 aa12.26□□□□□ -0.45
CHFR-220ENST00000541817 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.26□□□□□ -0.45
CHFR-220ENST00000541817 CXXC1Q9P0U4 656 aaPredicted RBP12.26□□□□□ -0.45
CHFR-220ENST00000541817 MROH5Q6ZUA9 1318 aa12.26□□□□□ -0.45
CHFR-220ENST00000541817 NCOR1O75376 2440 aa12.26□□□□□ -0.45
CHFR-220ENST00000541817 XIRP2A4UGR9 3374 aa12.26□□□□□ -0.45
CHFR-220ENST00000541817 APAF1O14727 1248 aa12.25□□□□□ -0.45
CHFR-220ENST00000541817 PDE8BO95263 885 aa12.25□□□□□ -0.45
CHFR-220ENST00000541817 LDHBP07195 334 aaKnown RBP12.25□□□□□ -0.45
CHFR-220ENST00000541817 SNX17Q15036 470 aa12.25□□□□□ -0.45
CHFR-220ENST00000541817 WDR43Q15061 677 aaKnown RBP eCLIP12.25□□□□□ -0.45
CHFR-220ENST00000541817 TWISTNBQ3B726 338 aaPredicted RBP12.25□□□□□ -0.45
CHFR-220ENST00000541817 SH3D19Q5HYK7 790 aa12.25□□□□□ -0.45
CHFR-220ENST00000541817 BEND3Q5T5X7 828 aa12.25□□□□□ -0.45
CHFR-220ENST00000541817 VGLL2Q8N8G2 317 aa12.25□□□□□ -0.45
CHFR-220ENST00000541817 ARRDC4Q8NCT1 418 aa12.25□□□□□ -0.45
CHFR-220ENST00000541817 SUCLG2Q96I99 432 aa12.25□□□□□ -0.45
CHFR-220ENST00000541817 IDI2Q9BXS1 227 aa12.25□□□□□ -0.45
CHFR-220ENST00000541817 USP17L5A8MUK1 530 aa12.24□□□□□ -0.45
CHFR-220ENST00000541817 GRM8O00222 908 aa12.24□□□□□ -0.45
CHFR-220ENST00000541817 UTYO14607 1347 aa12.24□□□□□ -0.45
CHFR-220ENST00000541817 PQBP1O60828 265 aaKnown RBP12.24□□□□□ -0.45
CHFR-220ENST00000541817 CLTBP09497 229 aa12.24□□□□□ -0.45
CHFR-220ENST00000541817 JAG1P78504 1218 aa12.24□□□□□ -0.45
CHFR-220ENST00000541817 SHROOM1Q2M3G4 852 aaPredicted RBP12.24□□□□□ -0.45
CHFR-220ENST00000541817 PRAMEF19Q5SWL8 479 aa12.24□□□□□ -0.45
CHFR-220ENST00000541817 KAZALD1Q96I82 304 aa12.24□□□□□ -0.45
CHFR-220ENST00000541817 NKX2-4Q9H2Z4 354 aa12.24□□□□□ -0.45
CHFR-220ENST00000541817 TACC3Q9Y6A5 838 aa12.24□□□□□ -0.45
CHFR-220ENST00000541817 GBF1Q92538 1859 aa12.23□□□□□ -0.45
CHFR-220ENST00000541817 SMIM22K7EJ46 135 aa12.23□□□□□ -0.45
CHFR-220ENST00000541817 MSCO60682 206 aa12.23□□□□□ -0.45
CHFR-220ENST00000541817 GPR37L1O60883 481 aa12.23□□□□□ -0.45
CHFR-220ENST00000541817 IFIT1P09914 478 aaKnown RBP12.23□□□□□ -0.45
CHFR-220ENST00000541817 CYBAP13498 195 aa12.23□□□□□ -0.45
CHFR-220ENST00000541817 LRRC41Q15345 812 aa12.23□□□□□ -0.45
CHFR-220ENST00000541817 CHMP4AQ9BY43 222 aa12.23□□□□□ -0.45
CHFR-220ENST00000541817 OSBPL5Q9H0X9 879 aaPredicted RBP12.23□□□□□ -0.45
CHFR-220ENST00000541817 TSPYL2Q9H2G4 693 aaPredicted RBP12.23□□□□□ -0.45
CHFR-220ENST00000541817 TMEM39AQ9NV64 488 aa12.23□□□□□ -0.45
CHFR-220ENST00000541817 C9orf78Q9NZ63 289 aaPredicted RBP12.23□□□□□ -0.45
CHFR-220ENST00000541817 TMOD4Q9NZQ9 345 aa12.23□□□□□ -0.45
CHFR-220ENST00000541817 MUC6Q6W4X9 2439 aa12.23□□□□□ -0.45
CHFR-220ENST00000541817 RFX7Q2KHR2 1363 aa12.22□□□□□ -0.45
CHFR-220ENST00000541817 KIAA0355O15063 1070 aa12.22□□□□□ -0.45
CHFR-220ENST00000541817 CNMDO75829 334 aa12.22□□□□□ -0.45
CHFR-220ENST00000541817 ACRP10323 421 aa12.22□□□□□ -0.45
CHFR-220ENST00000541817 FGFR2P21802 821 aa12.22□□□□□ -0.45
CHFR-220ENST00000541817 HOXA7P31268 230 aaPredicted RBP12.22□□□□□ -0.45
CHFR-220ENST00000541817 CAP2P40123 477 aa12.22□□□□□ -0.45
CHFR-220ENST00000541817 C16orf59Q7L2K0 433 aa12.22□□□□□ -0.45
CHFR-220ENST00000541817 CHD7Q9P2D1 2997 aa12.21□□□□□ -0.45
CHFR-220ENST00000541817 RFXAPO00287 272 aa12.21□□□□□ -0.45
CHFR-220ENST00000541817 PTPREP23469 700 aa12.21□□□□□ -0.45
CHFR-220ENST00000541817 BTDP43251 543 aa12.21□□□□□ -0.45
CHFR-220ENST00000541817 FAM47AQ5JRC9 791 aa12.21□□□□□ -0.45
CHFR-220ENST00000541817 TMEM240Q5SV17 173 aa12.21□□□□□ -0.45
CHFR-220ENST00000541817 UIMC1Q96RL1 719 aa12.21□□□□□ -0.45
CHFR-220ENST00000541817 CD320Q9NPF0 282 aa12.21□□□□□ -0.45
CHFR-220ENST00000541817 LRRC37A2A6NM11 1700 aa12.2□□□□□ -0.46
CHFR-220ENST00000541817 TBC1D12O60347 775 aa12.2□□□□□ -0.46
CHFR-220ENST00000541817 BACE1P56817 501 aa12.2□□□□□ -0.46
CHFR-220ENST00000541817 NHLH1Q02575 133 aa12.2□□□□□ -0.46
CHFR-220ENST00000541817 CALD1Q05682 793 aaKnown RBP12.2□□□□□ -0.46
CHFR-220ENST00000541817 SLC44A5Q8NCS7 719 aa12.2□□□□□ -0.46
CHFR-220ENST00000541817 BICC1Q9H694 974 aaKnown RBP12.2□□□□□ -0.46
CHFR-220ENST00000541817 AS3MTQ9HBK9 375 aa12.2□□□□□ -0.46
CHFR-220ENST00000541817 YBX2Q9Y2T7 364 aaKnown RBP12.2□□□□□ -0.46
CHFR-220ENST00000541817 SLC15A5A6NIM6 579 aa12.19□□□□□ -0.46
CHFR-220ENST00000541817 TLL1O43897 1013 aa12.19□□□□□ -0.46
CHFR-220ENST00000541817 FAAP100Q0VG06 881 aa12.19□□□□□ -0.46
CHFR-220ENST00000541817 PUM3Q15397 648 aaKnown RBP12.19□□□□□ -0.46
CHFR-220ENST00000541817 ZYXQ15942 572 aaKnown RBP12.19□□□□□ -0.46
CHFR-220ENST00000541817 AAK1Q2M2I8 961 aa12.19□□□□□ -0.46
CHFR-220ENST00000541817 KRT40Q6A162 431 aa12.19□□□□□ -0.46
CHFR-220ENST00000541817 SLC4A10Q6U841 1118 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms