RNA–Protein interactions for RNA: ENST00000541340.5

PPME1-206, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 3,618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-206ENST00000541340 PABPC1LQ4VXU2 614 aaKnown RBP8.33□□□□□ -1.08
PPME1-206ENST00000541340 RNF187Q5TA31 235 aaPredicted RBP8.33□□□□□ -1.08
PPME1-206ENST00000541340 SLF2Q8IX21 1173 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 SAMD3Q8N6K7 520 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 OCEL1Q9H607 264 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 ZWILCHQ9H900 591 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 PREBQ9HCU5 417 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 BZW2Q9Y6E2 419 aaKnown RBP8.33□□□□□ -1.08
PPME1-206ENST00000541340 ADCY9O60503 1353 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 EIF3FO00303 357 aaPredicted RBP8.33□□□□□ -1.08
PPME1-206ENST00000541340 A1BGP04217 495 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 CUL4BQ13620 913 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 KIFC2Q96AC6 838 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.33□□□□□ -1.083e-12■■□□□ 14.1
PPME1-206ENST00000541340 PAGR1Q9BTK6 254 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 GOLPH3LQ9H4A5 285 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 IL1RAPL2Q9NP60 686 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 INCENPQ9NQS7 918 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 HAUS2Q9NVX0 235 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 ANO10Q9NW15 660 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 BARX2Q9UMQ3 279 aaPredicted RBP8.33□□□□□ -1.08
PPME1-206ENST00000541340 ATP8A1Q9Y2Q0 1164 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 N6AMT1Q9Y5N5 214 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 XIRP1Q702N8 1843 aaKnown RBP8.33□□□□□ -1.08
PPME1-206ENST00000541340 TTC21AQ8NDW8 1320 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 RHOXF2BP0C7M4 288 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 FAM200BP0CF97 657 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 ATP1A3P13637 1013 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 DESP17661 470 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 STIP1P31948 543 aaKnown RBP8.33□□□□□ -1.08
PPME1-206ENST00000541340 FAM69CQ0P6D2 419 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 LARP1Q6PKG0 1096 aaKnown RBP8.33□□□□□ -1.08
PPME1-206ENST00000541340 SRGAP1Q7Z6B7 1085 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 MYOCDQ8IZQ8 938 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 TRIML1Q8N9V2 468 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 JAKMIP1Q96N16 626 aaKnown RBP8.33□□□□□ -1.08
PPME1-206ENST00000541340 RUFY1Q96T51 708 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 RHOXF2Q9BQY4 288 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 NLRP2Q9NX02 1062 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 ZFATQ9P243 1243 aa8.33□□□□□ -1.08
PPME1-206ENST00000541340 ATP10BO94823 1461 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 MED1Q15648 1581 aaPredicted RBP8.32□□□□□ -1.08
PPME1-206ENST00000541340 ADGRF5Q8IZF2 1346 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 F6X3S4 739 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 FLT3P36888 993 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 GNG11P61952 73 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 STK3Q13188 491 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 POSTNQ15063 836 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 HSP90AA4PQ58FG1 418 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 HDAC7Q8WUI4 952 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 DUSP9Q99956 384 aaKnown RBP8.32□□□□□ -1.08
PPME1-206ENST00000541340 WDR35Q9P2L0 1181 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 DEPDC5O75140 1603 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 NUTM2FA1L443 756 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 KIF5CO60282 957 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 ALOX15P16050 662 aaPredicted RBP8.32□□□□□ -1.08
PPME1-206ENST00000541340 PRKAR2BP31323 418 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 IFFO1Q0D2I5 559 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 SMUG1Q53HV7 270 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 UHMK1Q8TAS1 419 aaKnown RBP8.32□□□□□ -1.08
PPME1-206ENST00000541340 CLIP3Q96DZ5 547 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 HINFPQ9BQA5 517 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 DESI2Q9BSY9 194 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 UBAP1Q9NZ09 502 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 HPCAL4Q9UM19 191 aa8.32□□□□□ -1.08
PPME1-206ENST00000541340 GOLGA6L7A0A1B0GV03 622 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 A0A1B0GVL5 298 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 CUTAO60888 179 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 LGR5O75473 907 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 ANP32DO95626 131 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 PPARDQ03181 441 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 KARSQ15046 597 aaKnown RBP8.31□□□□□ -1.08
PPME1-206ENST00000541340 DPCR1Q3MIW9 517 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 ZNF394Q53GI3 561 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 Q6ZUG5 572 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 RPAP2Q8IXW5 612 aaPredicted RBP8.31□□□□□ -1.08
PPME1-206ENST00000541340 CEP57L1Q8IYX8 460 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 DPF2Q92785 391 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 C2CD2Q9Y426 696 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 L3MBTL1Q9Y468 752 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 TAF6LQ9Y6J9 622 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 NEO1Q92859 1461 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 HMMRO75330 724 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 GFPT2O94808 682 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 GGCXP38435 758 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 ABL2P42684 1182 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 GUCY1B3Q02153 619 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 SAFB2Q14151 953 aaKnown RBP eCLIP8.31□□□□□ -1.08
PPME1-206ENST00000541340 SLMAPQ14BN4 828 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 KIAA0753Q2KHM9 967 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 RNF168Q8IYW5 571 aaPredicted RBP8.31□□□□□ -1.08
PPME1-206ENST00000541340 SMARCC2Q8TAQ2 1214 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 TEKT4Q8WW24 435 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 SH3GL2Q99962 352 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 CENPOQ9BU64 300 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 NOD2Q9HC29 1040 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 DDX19AQ9NUU7 478 aaKnown RBP8.31□□□□□ -1.08
PPME1-206ENST00000541340 RABL2AQ9UBK7 228 aaPredicted RBP8.31□□□□□ -1.08
PPME1-206ENST00000541340 ATP6V1G2O95670 118 aa8.31□□□□□ -1.08
PPME1-206ENST00000541340 HARSP12081 509 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms