RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 GAS2L3Q86XJ1 694 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 ZFPM1Q8IX07 1006 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 CCDC82Q8N4S0 544 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 SHISA4Q96DD7 197 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 USP40Q9NVE5 1235 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 SIPA1L1O43166 1804 aa14.32□□□□□ -0.12
AP003559.1-201ENST00000540906 TSPY2A6NKD2 308 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 SLC3A2P08195 630 aaKnown RBP14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 TROAPQ12815 778 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 IFIT1BQ5T764 474 aaKnown RBP14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 POTEDQ86YR6 584 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 FANCBQ8NB91 859 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 C8orf76Q96K31 380 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 SGIP1Q9BQI5 828 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 SLC26A6Q9BXS9 759 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 SPON1Q9HCB6 807 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 ATP6V1DQ9Y5K8 247 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 UTRNP46939 3433 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 PLEKHA8P1O95397 391 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 IFNAR1P17181 557 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 CDK8P49336 464 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 FUT2Q10981 343 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 HHIPL2Q6UWX4 724 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 C16orf86Q6ZW13 317 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 IQCA1Q86XH1 822 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 FBXO18Q8NFZ0 1043 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 TEKT1Q969V4 418 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 ALG1Q9BT22 464 aa14.31□□□□□ -0.12
AP003559.1-201ENST00000540906 FMNL1O95466 1100 aaPredicted RBP14.3□□□□□ -0.12
AP003559.1-201ENST00000540906 IARSP41252 1262 aaKnown RBP14.3□□□□□ -0.12
AP003559.1-201ENST00000540906 FKBP1AP62942 108 aaKnown RBP14.3□□□□□ -0.12
AP003559.1-201ENST00000540906 SYNE3Q6ZMZ3 975 aa14.3□□□□□ -0.12
AP003559.1-201ENST00000540906 RASGRP2Q7LDG7 609 aa14.3□□□□□ -0.12
AP003559.1-201ENST00000540906 CERS3Q8IU89 383 aa14.3□□□□□ -0.12
AP003559.1-201ENST00000540906 TMTC2Q8N394 836 aa14.3□□□□□ -0.12
AP003559.1-201ENST00000540906 ZDHHC15Q96MV8 337 aa14.3□□□□□ -0.12
AP003559.1-201ENST00000540906 hCG_1642624A0A1W2PR95 340 aa14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 RAD17O75943 681 aa14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 PDIA4P13667 645 aaKnown RBP14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 CRACR2BQ8N4Y2 399 aaPredicted RBP14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 SUPT20HQ8NEM7 779 aa14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 LEO1Q8WVC0 666 aaPredicted RBP14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 CHMP4CQ96CF2 233 aa14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 PSMD1Q99460 953 aa14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 MKNK2Q9HBH9 465 aa14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 FSD2A1L4K1 749 aa14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 KRT85P78386 507 aa14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 KIF23Q02241 960 aaPredicted RBP14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 GABPAQ06546 454 aa14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 SSRP1Q08945 709 aaKnown RBP14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 KRT40Q6A162 431 aa14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 USP28Q96RU2 1077 aa14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 OSBPL5Q9H0X9 879 aaPredicted RBP14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 ZSCAN16Q9H4T2 348 aaPredicted RBP14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 KIF3AQ9Y496 699 aa14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 STK36Q9NRP7 1315 aa14.29□□□□□ -0.12
AP003559.1-201ENST00000540906 MYH6P13533 1939 aa14.28□□□□□ -0.12
AP003559.1-201ENST00000540906 FER1L6Q2WGJ9 1857 aa14.28□□□□□ -0.12
AP003559.1-201ENST00000540906 CDKL5O76039 1030 aa14.28□□□□□ -0.12
AP003559.1-201ENST00000540906 RCAN1P53805 252 aa14.28□□□□□ -0.12
AP003559.1-201ENST00000540906 TGFB2P61812 414 aa14.28□□□□□ -0.12
AP003559.1-201ENST00000540906 CEBPZQ03701 1054 aaKnown RBP14.28□□□□□ -0.12
AP003559.1-201ENST00000540906 SLC35G1Q2M3R5 365 aa14.28□□□□□ -0.12
AP003559.1-201ENST00000540906 ZSCAN23Q3MJ62 389 aa14.28□□□□□ -0.12
AP003559.1-201ENST00000540906 CATIPQ7Z7H3 387 aa14.28□□□□□ -0.12
AP003559.1-201ENST00000540906 RTKN2Q8IZC4 609 aa14.28□□□□□ -0.12
AP003559.1-201ENST00000540906 LARGE2Q8N3Y3 721 aa14.28□□□□□ -0.12
AP003559.1-201ENST00000540906 PGBD1Q96JS3 809 aa14.28□□□□□ -0.12
AP003559.1-201ENST00000540906 FAM198AQ9UFP1 575 aa14.28□□□□□ -0.12
AP003559.1-201ENST00000540906 PSMD14O00487 310 aa14.27□□□□□ -0.12
AP003559.1-201ENST00000540906 SH3BP5LQ7L8J4 393 aa14.27□□□□□ -0.12
AP003559.1-201ENST00000540906 AMOTL1Q8IY63 956 aa14.27□□□□□ -0.12
AP003559.1-201ENST00000540906 SRBD1Q8N5C6 995 aaKnown RBP14.27□□□□□ -0.12
AP003559.1-201ENST00000540906 PIM2Q9P1W9 311 aa14.27□□□□□ -0.12
AP003559.1-201ENST00000540906 ZBTB12Q9Y330 459 aaPredicted RBP14.27□□□□□ -0.12
AP003559.1-201ENST00000540906 DDAH1O94760 285 aa14.27□□□□□ -0.13
AP003559.1-201ENST00000540906 MBD3O95983 291 aa14.27□□□□□ -0.13
AP003559.1-201ENST00000540906 TSPY3P0CV98 308 aa14.27□□□□□ -0.13
AP003559.1-201ENST00000540906 TSPY8P0CW00 308 aa14.27□□□□□ -0.13
AP003559.1-201ENST00000540906 RBM5P52756 815 aaKnown RBP eCLIP14.27□□□□□ -0.13
AP003559.1-201ENST00000540906 UBE2HP62256 183 aa14.27□□□□□ -0.13
AP003559.1-201ENST00000540906 PKN1Q16512 942 aa14.27□□□□□ -0.13
AP003559.1-201ENST00000540906 CPLX2Q6PUV4 134 aaKnown RBP14.27□□□□□ -0.13
AP003559.1-201ENST00000540906 TMTC3Q6ZXV5 915 aa14.27□□□□□ -0.13
AP003559.1-201ENST00000540906 CLEC10AQ8IUN9 316 aa14.27□□□□□ -0.13
AP003559.1-201ENST00000540906 ZNF444Q8N0Y2 327 aaPredicted RBP14.27□□□□□ -0.13
AP003559.1-201ENST00000540906 ANKS1AQ92625 1134 aa14.27□□□□□ -0.13
AP003559.1-201ENST00000540906 KCNJ14Q9UNX9 436 aa14.27□□□□□ -0.13
AP003559.1-201ENST00000540906 BAZ2BQ9UIF8 2168 aaKnown RBP14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 FAM196BA6NMK8 535 aa14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 NFKBIEO00221 500 aa14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 AKR1B1P15121 316 aa14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 VEGFAP15692 232 aaPredicted RBP14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 TCP10Q12799 353 aa14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 SHROOM1Q2M3G4 852 aaPredicted RBP14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 CFAP100Q494V2 611 aa14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 PRMT6Q96LA8 375 aaPredicted RBP14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 SPATA32Q96LK8 384 aa14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 GMLQ99445 158 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms