RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 RPS8P62241 208 aaKnown RBP11.85□□□□□ -0.51
LMO3-224ENST00000540848 TTC6Q86TZ1 520 aa11.85□□□□□ -0.51
LMO3-224ENST00000540848 SGMS1Q86VZ5 419 aa11.85□□□□□ -0.51
LMO3-224ENST00000540848 IFNL3Q8IZI9 196 aa11.85□□□□□ -0.51
LMO3-224ENST00000540848 LEO1Q8WVC0 666 aaPredicted RBP11.85□□□□□ -0.51
LMO3-224ENST00000540848 LRP2BPQ9P2M1 347 aa11.85□□□□□ -0.51
LMO3-224ENST00000540848 TRPC5Q9UL62 973 aaPredicted RBP11.85□□□□□ -0.51
LMO3-224ENST00000540848 MINPP1Q9UNW1 487 aa11.85□□□□□ -0.51
LMO3-224ENST00000540848 NID2Q14112 1375 aa11.85□□□□□ -0.51
LMO3-224ENST00000540848 KLF18A0A0U1RQI7 1052 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 GOLGA8BA8MQT2 603 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 TNFRSF10AO00220 468 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 ANTXR2P58335 489 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 SART3Q15020 963 aaKnown RBP11.84□□□□□ -0.51
LMO3-224ENST00000540848 GIMAP6Q6P9H5 292 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 FERMT3Q86UX7 667 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 VPS37DQ86XT2 251 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 TMTC2Q8N394 836 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 PDLIM2Q96JY6 352 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 NAP1L2Q9ULW6 460 aaPredicted RBP11.84□□□□□ -0.51
LMO3-224ENST00000540848 A0A0G2JLW4 131 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 SH2B2O14492 632 aaPredicted RBP11.84□□□□□ -0.51
LMO3-224ENST00000540848 C4AP0C0L4 1744 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 CCT2P78371 535 aaKnown RBP11.84□□□□□ -0.51
LMO3-224ENST00000540848 AKNAD1Q5T1N1 836 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 TRAPPC3LQ5T215 181 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 BRAPQ7Z569 592 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 STAG1Q8WVM7 1258 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 DDX11Q96FC9 970 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 PKD2L1Q9P0L9 805 aa11.84□□□□□ -0.51
LMO3-224ENST00000540848 MAST2Q6P0Q8 1798 aa11.83□□□□□ -0.52
LMO3-224ENST00000540848 GSG1L2A8MUP6 293 aa11.83□□□□□ -0.52
LMO3-224ENST00000540848 CAVIN2O95810 425 aa11.83□□□□□ -0.52
LMO3-224ENST00000540848 RFC4P35249 363 aa11.83□□□□□ -0.52
LMO3-224ENST00000540848 MFSD6Q6ZSS7 791 aa11.83□□□□□ -0.52
LMO3-224ENST00000540848 FBXO33Q7Z6M2 555 aa11.83□□□□□ -0.52
LMO3-224ENST00000540848 TBC1D10CQ8IV04 446 aa11.83□□□□□ -0.52
LMO3-224ENST00000540848 REPIN1Q9BWE0 567 aaKnown RBP11.83□□□□□ -0.52
LMO3-224ENST00000540848 ANAPC4Q9UJX5 808 aa11.83□□□□□ -0.52
LMO3-224ENST00000540848 RCOR1Q9UKL0 485 aa11.83□□□□□ -0.52
LMO3-224ENST00000540848 MYH13Q9UKX3 1938 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 DUOX1Q9NRD9 1551 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 KDM4AO75164 1064 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 CCDC192P0DO97 292 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 TDO2P48775 406 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 METAP2P50579 478 aaKnown RBP eCLIP11.82□□□□□ -0.52
LMO3-224ENST00000540848 PPP2R5BQ15173 497 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 MSS51Q4VC12 460 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 SLC27A3Q5K4L6 730 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 SYNE3Q6ZMZ3 975 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 C8orf76Q96K31 380 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 NUP62CLQ9H1M0 184 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 NCOA5Q9HCD5 579 aaKnown RBP11.82□□□□□ -0.52
LMO3-224ENST00000540848 EPB41L4AQ9HCS5 686 aaPredicted RBP11.82□□□□□ -0.52
LMO3-224ENST00000540848 ORC3Q9UBD5 711 aaPredicted RBP11.82□□□□□ -0.52
LMO3-224ENST00000540848 SLC4A4Q9Y6R1 1079 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 AFF2P51816 1311 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 STK36Q9NRP7 1315 aa11.82□□□□□ -0.52
LMO3-224ENST00000540848 KIAA1551Q9HCM1 1747 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 MAGEB6P1A0A0J9YX57 407 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 CTAGE5O15320 804 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 CYP7A1P22680 504 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 MAP3K11Q16584 847 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 SPTY2D1Q68D10 685 aaPredicted RBP11.81□□□□□ -0.52
LMO3-224ENST00000540848 APOA5Q6Q788 366 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 BICDL1Q6ZP65 573 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 CHST3Q7LGC8 479 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 FBXO18Q8NFZ0 1043 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 IGDCC4Q8TDY8 1250 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 WASF1Q92558 559 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 FAM84BQ96KN1 310 aaPredicted RBP11.81□□□□□ -0.52
LMO3-224ENST00000540848 BRIP1Q9BX63 1249 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 ARMT1Q9H993 441 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 CACNA1SQ13698 1873 aa11.81□□□□□ -0.52
LMO3-224ENST00000540848 CCDC196A0A1B0GTZ2 297 aa11.8□□□□□ -0.52
LMO3-224ENST00000540848 ERICH2A1L162 156 aa11.8□□□□□ -0.52
LMO3-224ENST00000540848 ESPNB1AK53 854 aa11.8□□□□□ -0.52
LMO3-224ENST00000540848 B4E1Z4 1266 aa11.8□□□□□ -0.52
LMO3-224ENST00000540848 ZBTB43O43298 467 aa11.8□□□□□ -0.52
LMO3-224ENST00000540848 TMEM67Q5HYA8 995 aa11.8□□□□□ -0.52
LMO3-224ENST00000540848 RBM43Q6ZSC3 357 aaKnown RBP11.8□□□□□ -0.52
LMO3-224ENST00000540848 LCORLQ8N3X6 602 aa11.8□□□□□ -0.52
LMO3-224ENST00000540848 CELF1Q92879 486 aaKnown RBP11.8□□□□□ -0.52
LMO3-224ENST00000540848 FUCA2Q9BTY2 467 aa11.8□□□□□ -0.52
LMO3-224ENST00000540848 FAM217BQ9NTX9 383 aaPredicted RBP11.8□□□□□ -0.52
LMO3-224ENST00000540848 RAI14Q9P0K7 980 aa11.8□□□□□ -0.52
LMO3-224ENST00000540848 SRP68Q9UHB9 627 aaKnown RBP11.8□□□□□ -0.52
LMO3-224ENST00000540848 LEMD3Q9Y2U8 911 aa11.8□□□□□ -0.52
LMO3-224ENST00000540848 CCDC69A6NI79 296 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 SNAP23O00161 211 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 YEATS4O95619 227 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 FDPSP14324 419 aaKnown RBP11.79□□□□□ -0.52
LMO3-224ENST00000540848 HIBADHP31937 336 aaKnown RBP11.79□□□□□ -0.52
LMO3-224ENST00000540848 CLCN1P35523 988 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 ADD1P35611 737 aaKnown RBP11.79□□□□□ -0.52
LMO3-224ENST00000540848 GYG1P46976 350 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 RPIAP49247 311 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 CYB5R4Q7L1T6 521 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 CERS3Q8IU89 383 aa11.79□□□□□ -0.52
LMO3-224ENST00000540848 SEPT12Q8IYM1 358 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms