RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 PAK6Q9NQU5 681 aaPredicted RBP19.87■□□□□ 0.77
TRIM65-203ENST00000540812 NDUFB9Q9Y6M9 179 aa19.87■□□□□ 0.77
TRIM65-203ENST00000540812 PEX10O60683 326 aa19.86■□□□□ 0.77
TRIM65-203ENST00000540812 CYP7A1P22680 504 aa19.86■□□□□ 0.77
TRIM65-203ENST00000540812 BACE1P56817 501 aa19.86■□□□□ 0.77
TRIM65-203ENST00000540812 FOXP4Q8IVH2 680 aaPredicted RBP19.86■□□□□ 0.77
TRIM65-203ENST00000540812 HTATIP2Q9BUP3 242 aa19.86■□□□□ 0.77
TRIM65-203ENST00000540812 GJD2Q9UKL4 321 aa19.86■□□□□ 0.77
TRIM65-203ENST00000540812 IDH1O75874 414 aaKnown RBP19.85■□□□□ 0.77
TRIM65-203ENST00000540812 TFRCP02786 760 aaKnown RBP19.85■□□□□ 0.77
TRIM65-203ENST00000540812 CEP85Q6P2H3 762 aa19.85■□□□□ 0.77
TRIM65-203ENST00000540812 MIGA1Q8NAN2 632 aa19.85■□□□□ 0.77
TRIM65-203ENST00000540812 P2RX7Q99572 595 aaKnown RBP19.85■□□□□ 0.77
TRIM65-203ENST00000540812 MORF4L1Q9UBU8 362 aa19.85■□□□□ 0.77
TRIM65-203ENST00000540812 ZBTB21Q9ULJ3 1066 aa19.85■□□□□ 0.77
TRIM65-203ENST00000540812 FOCADQ5VW36 1801 aa19.85■□□□□ 0.77
TRIM65-203ENST00000540812 HOXA7P31268 230 aaPredicted RBP19.84■□□□□ 0.77
TRIM65-203ENST00000540812 IRX3P78415 501 aaPredicted RBP19.84■□□□□ 0.77
TRIM65-203ENST00000540812 TRIM32Q13049 653 aa19.84■□□□□ 0.77
TRIM65-203ENST00000540812 MAGEB6Q8N7X4 407 aa19.84■□□□□ 0.77
TRIM65-203ENST00000540812 TRIM34Q9BYJ4 488 aa19.84■□□□□ 0.77
TRIM65-203ENST00000540812 CRISPLD2Q9H0B8 497 aa19.84■□□□□ 0.77
TRIM65-203ENST00000540812 ANTXR1Q9H6X2 564 aa19.84■□□□□ 0.77
TRIM65-203ENST00000540812 TXNRD2Q9NNW7 524 aa19.84■□□□□ 0.77
TRIM65-203ENST00000540812 TMOD4Q9NZQ9 345 aa19.84■□□□□ 0.77
TRIM65-203ENST00000540812 RBM27Q9P2N5 1060 aaKnown RBP19.84■□□□□ 0.77
TRIM65-203ENST00000540812 IGSF3O75054 1194 aa19.83■□□□□ 0.77
TRIM65-203ENST00000540812 PANK1Q8TE04 598 aa19.83■□□□□ 0.77
TRIM65-203ENST00000540812 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.83■□□□□ 0.773e-6■■■■□ 19.8
TRIM65-203ENST00000540812 EXOC6BQ9Y2D4 811 aa19.83■□□□□ 0.77
TRIM65-203ENST00000540812 USP17L10C9JJH3 530 aa19.82■□□□□ 0.76
TRIM65-203ENST00000540812 HLA-DOAP06340 250 aa19.82■□□□□ 0.76
TRIM65-203ENST00000540812 HERVK_113P62684 666 aa19.82■□□□□ 0.76
TRIM65-203ENST00000540812 GINM1Q9NU53 330 aa19.82■□□□□ 0.76
TRIM65-203ENST00000540812 LAMA3Q16787 3333 aa19.81■□□□□ 0.76
TRIM65-203ENST00000540812 C19orf81C9J6K1 198 aa19.81■□□□□ 0.76
TRIM65-203ENST00000540812 HMGCRP04035 888 aa19.81■□□□□ 0.76
TRIM65-203ENST00000540812 USP5P45974 858 aa19.81■□□□□ 0.76
TRIM65-203ENST00000540812 AACSQ86V21 672 aa19.81■□□□□ 0.76
TRIM65-203ENST00000540812 DIS3LQ8TF46 1054 aaKnown RBP19.81■□□□□ 0.76
TRIM65-203ENST00000540812 EMILIN3Q9NT22 766 aa19.81■□□□□ 0.76
TRIM65-203ENST00000540812 PLXNB2O15031 1838 aa19.81■□□□□ 0.76
TRIM65-203ENST00000540812 GH2P01242 217 aa19.8■□□□□ 0.76
TRIM65-203ENST00000540812 CYP2B6P20813 491 aa19.8■□□□□ 0.76
TRIM65-203ENST00000540812 POTEEQ6S8J3 1075 aa19.8■□□□□ 0.76
TRIM65-203ENST00000540812 PAWRQ96IZ0 340 aaKnown RBP19.8■□□□□ 0.76
TRIM65-203ENST00000540812 PRO3102Q9H379 93 aa19.8■□□□□ 0.76
TRIM65-203ENST00000540812 RBPJLQ9UBG7 517 aa19.8■□□□□ 0.76
TRIM65-203ENST00000540812 NR2E3Q9Y5X4 410 aa19.8■□□□□ 0.76
TRIM65-203ENST00000540812 Q3C1V9 767 aa19.79■□□□□ 0.76
TRIM65-203ENST00000540812 TATDN1Q6P1N9 297 aa19.79■□□□□ 0.76
TRIM65-203ENST00000540812 USP17L2Q6R6M4 530 aa19.79■□□□□ 0.76
TRIM65-203ENST00000540812 GPRC5AQ8NFJ5 357 aa19.79■□□□□ 0.76
TRIM65-203ENST00000540812 TRIB2Q92519 343 aa19.79■□□□□ 0.76
TRIM65-203ENST00000540812 IL1RAPL2Q9NP60 686 aa19.79■□□□□ 0.76
TRIM65-203ENST00000540812 CAPN2P17655 700 aa19.78■□□□□ 0.76
TRIM65-203ENST00000540812 MAP3K12Q12852 859 aa19.78■□□□□ 0.76
TRIM65-203ENST00000540812 ERC1Q8IUD2 1116 aa19.78■□□□□ 0.76
TRIM65-203ENST00000540812 RIOK1Q9BRS2 568 aaKnown RBP19.78■□□□□ 0.76
TRIM65-203ENST00000540812 SERPINB13Q9UIV8 391 aa19.78■□□□□ 0.76
TRIM65-203ENST00000540812 MYH1P12882 1939 aa19.78■□□□□ 0.76
TRIM65-203ENST00000540812 RPTORQ8N122 1335 aa19.77■□□□□ 0.76
TRIM65-203ENST00000540812 EVI5O60447 810 aa19.77■□□□□ 0.76
TRIM65-203ENST00000540812 ERVK-9P63128 1117 aa19.77■□□□□ 0.76
TRIM65-203ENST00000540812 ERVK-24P63145 666 aa19.77■□□□□ 0.76
TRIM65-203ENST00000540812 ZYXQ15942 572 aaKnown RBP19.77■□□□□ 0.76
TRIM65-203ENST00000540812 PAGR1Q9BTK6 254 aa19.77■□□□□ 0.76
TRIM65-203ENST00000540812 EHD4Q9H223 541 aa19.77■□□□□ 0.76
TRIM65-203ENST00000540812 PORCNQ9H237 461 aa19.77■□□□□ 0.76
TRIM65-203ENST00000540812 HMX1Q9NP08 348 aaPredicted RBP19.77■□□□□ 0.76
TRIM65-203ENST00000540812 ZBED9Q6R2W3 1325 aa19.76■□□□□ 0.75
TRIM65-203ENST00000540812 MNX1P50219 401 aaPredicted RBP19.76■□□□□ 0.75
TRIM65-203ENST00000540812 MAP3K21Q5TCX8 1036 aa19.76■□□□□ 0.75
TRIM65-203ENST00000540812 NECAB2Q7Z6G3 386 aa19.76■□□□□ 0.75
TRIM65-203ENST00000540812 CERS3Q8IU89 383 aa19.76■□□□□ 0.75
TRIM65-203ENST00000540812 RHPN1Q8TCX5 695 aa19.76■□□□□ 0.75
TRIM65-203ENST00000540812 NUDT12Q9BQG2 462 aa19.76■□□□□ 0.75
TRIM65-203ENST00000540812 ALPK3Q96L96 1907 aa19.75■□□□□ 0.75
TRIM65-203ENST00000540812 PRKAR2AP13861 404 aaKnown RBP19.75■□□□□ 0.75
TRIM65-203ENST00000540812 SHMT1P34896 483 aa19.75■□□□□ 0.75
TRIM65-203ENST00000540812 PLCD1P51178 756 aa19.75■□□□□ 0.75
TRIM65-203ENST00000540812 EVX2Q03828 476 aa19.75■□□□□ 0.75
TRIM65-203ENST00000540812 RAB3GAP1Q15042 981 aa19.75■□□□□ 0.75
TRIM65-203ENST00000540812 CERKLQ49MI3 558 aaPredicted RBP19.75■□□□□ 0.75
TRIM65-203ENST00000540812 ACER1Q8TDN7 264 aa19.75■□□□□ 0.75
TRIM65-203ENST00000540812 SOCS4Q8WXH5 440 aa19.75■□□□□ 0.75
TRIM65-203ENST00000540812 USP6NLQ92738 828 aa19.75■□□□□ 0.75
TRIM65-203ENST00000540812 C12orf42Q96LP6 360 aa19.75■□□□□ 0.75
TRIM65-203ENST00000540812 CNMDO75829 334 aa19.74■□□□□ 0.75
TRIM65-203ENST00000540812 XRCC5P13010 732 aaKnown RBP19.74■□□□□ 0.75
TRIM65-203ENST00000540812 MAPK4P31152 587 aa19.74■□□□□ 0.75
TRIM65-203ENST00000540812 ABCB5Q2M3G0 1257 aa19.74■□□□□ 0.75
TRIM65-203ENST00000540812 GPR142Q7Z601 462 aa19.74■□□□□ 0.75
TRIM65-203ENST00000540812 TTC6Q86TZ1 520 aa19.74■□□□□ 0.75
TRIM65-203ENST00000540812 ANKLE1Q8NAG6 615 aa19.74■□□□□ 0.75
TRIM65-203ENST00000540812 GTF3C2Q8WUA4 911 aaPredicted RBP19.74■□□□□ 0.75
TRIM65-203ENST00000540812 FEZ1Q99689 392 aa19.74■□□□□ 0.75
TRIM65-203ENST00000540812 MAGEB6P1A0A0J9YX57 407 aa19.73■□□□□ 0.75
TRIM65-203ENST00000540812 APBB1O00213 710 aa19.73■□□□□ 0.75
TRIM65-203ENST00000540812 PDE6AP16499 860 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms