RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ZBTB48P10074 688 aaPredicted RBP18.43■□□□□ 0.54
DDB1-218ENST00000540784 PTPRAP18433 802 aa18.43■□□□□ 0.54
DDB1-218ENST00000540784 MAP2K2P36507 400 aa18.43■□□□□ 0.54
DDB1-218ENST00000540784 PTH1RQ03431 593 aa18.43■□□□□ 0.54
DDB1-218ENST00000540784 CTDSPL2Q05D32 466 aa18.43■□□□□ 0.54
DDB1-218ENST00000540784 ZNF444Q8N0Y2 327 aaPredicted RBP18.43■□□□□ 0.54
DDB1-218ENST00000540784 CNKSR2Q8WXI2 1034 aa18.43■□□□□ 0.54
DDB1-218ENST00000540784 OTUD5Q96G74 571 aa18.43■□□□□ 0.54
DDB1-218ENST00000540784 CCDC17Q96LX7 622 aa18.43■□□□□ 0.54
DDB1-218ENST00000540784 ZHX2Q9Y6X8 837 aa18.43■□□□□ 0.54
DDB1-218ENST00000540784 ZMYM6O95789 1325 aa18.43■□□□□ 0.54
DDB1-218ENST00000540784 USP17L5A8MUK1 530 aa18.42■□□□□ 0.54
DDB1-218ENST00000540784 MPHOSPH10O00566 681 aaKnown RBP18.42■□□□□ 0.54
DDB1-218ENST00000540784 AOC2O75106 756 aa18.42■□□□□ 0.54
DDB1-218ENST00000540784 GH2P01242 217 aa18.42■□□□□ 0.54
DDB1-218ENST00000540784 JAG1P78504 1218 aa18.42■□□□□ 0.54
DDB1-218ENST00000540784 KIF23Q02241 960 aaPredicted RBP18.42■□□□□ 0.54
DDB1-218ENST00000540784 MAP4K1Q92918 833 aa18.42■□□□□ 0.54
DDB1-218ENST00000540784 U3KPZ7 1027 aaPredicted RBP18.42■□□□□ 0.54
DDB1-218ENST00000540784 NAV1Q8NEY1 1877 aa18.41■□□□□ 0.54
DDB1-218ENST00000540784 GJA5P36382 358 aa18.41■□□□□ 0.54
DDB1-218ENST00000540784 HAND2P61296 217 aa18.41■□□□□ 0.54
DDB1-218ENST00000540784 PPIL2Q13356 520 aa18.41■□□□□ 0.54
DDB1-218ENST00000540784 IMMTQ16891 758 aaKnown RBP18.41■□□□□ 0.54
DDB1-218ENST00000540784 REM2Q8IYK8 340 aaPredicted RBP18.41■□□□□ 0.54
DDB1-218ENST00000540784 ANO2Q9NQ90 1003 aa18.41■□□□□ 0.54
DDB1-218ENST00000540784 ZBTB21Q9ULJ3 1066 aa18.41■□□□□ 0.54
DDB1-218ENST00000540784 BAZ2AQ9UIF9 1905 aaKnown RBP18.41■□□□□ 0.54
DDB1-218ENST00000540784 IRF6O14896 467 aa18.4■□□□□ 0.54
DDB1-218ENST00000540784 RAB3GAP1Q15042 981 aa18.4■□□□□ 0.54
DDB1-218ENST00000540784 TBC1D2Q9BYX2 928 aa18.4■□□□□ 0.54
DDB1-218ENST00000540784 LSG1Q9H089 658 aaKnown RBP18.4■□□□□ 0.54
DDB1-218ENST00000540784 AS3MTQ9HBK9 375 aa18.4■□□□□ 0.54
DDB1-218ENST00000540784 INCENPQ9NQS7 918 aa18.4■□□□□ 0.54
DDB1-218ENST00000540784 AFG3L2Q9Y4W6 797 aa18.4■□□□□ 0.54
DDB1-218ENST00000540784 ROBO3Q96MS0 1386 aa18.4■□□□□ 0.54
DDB1-218ENST00000540784 MANSC4A6NHS7 340 aaPredicted RBP18.39■□□□□ 0.53
DDB1-218ENST00000540784 CXCL11O14625 94 aa18.39■□□□□ 0.53
DDB1-218ENST00000540784 PRDM1O75626 825 aa18.39■□□□□ 0.53
DDB1-218ENST00000540784 AKR1B1P15121 316 aa18.39■□□□□ 0.53
DDB1-218ENST00000540784 RASA1P20936 1047 aa18.39■□□□□ 0.53
DDB1-218ENST00000540784 GTF2A2P52657 109 aa18.39■□□□□ 0.53
DDB1-218ENST00000540784 INHBEP58166 350 aa18.39■□□□□ 0.53
DDB1-218ENST00000540784 SHROOM1Q2M3G4 852 aaPredicted RBP18.39■□□□□ 0.53
DDB1-218ENST00000540784 MFSD6Q6ZSS7 791 aa18.39■□□□□ 0.53
DDB1-218ENST00000540784 TMEM179Q6ZVK1 233 aa18.39■□□□□ 0.53
DDB1-218ENST00000540784 ZIC5Q96T25 663 aa18.39■□□□□ 0.53
DDB1-218ENST00000540784 RNF41Q9H4P4 317 aaPredicted RBP18.39■□□□□ 0.53
DDB1-218ENST00000540784 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.39■□□□□ 0.53
DDB1-218ENST00000540784 SIPA1L1O43166 1804 aa18.38■□□□□ 0.53
DDB1-218ENST00000540784 FGRP09769 529 aa18.38■□□□□ 0.53
DDB1-218ENST00000540784 PCP11498 1178 aaKnown RBP18.38■□□□□ 0.53
DDB1-218ENST00000540784 SPP2Q13103 211 aa18.38■□□□□ 0.53
DDB1-218ENST00000540784 SNAPC2Q13487 334 aa18.38■□□□□ 0.53
DDB1-218ENST00000540784 SEPT2Q15019 361 aa18.38■□□□□ 0.53
DDB1-218ENST00000540784 AKNAD1Q5T1N1 836 aa18.38■□□□□ 0.53
DDB1-218ENST00000540784 CCDC84Q86UT8 332 aaPredicted RBP18.38■□□□□ 0.53
DDB1-218ENST00000540784 ZNF280CQ8ND82 737 aa18.38■□□□□ 0.53
DDB1-218ENST00000540784 WDR18Q9BV38 432 aa18.38■□□□□ 0.53
DDB1-218ENST00000540784 TOMM22Q9NS69 142 aa18.38■□□□□ 0.53
DDB1-218ENST00000540784 RBM8AQ9Y5S9 174 aaKnown RBP18.38■□□□□ 0.53
DDB1-218ENST00000540784 DDX60LQ5H9U9 1706 aaKnown RBP18.37■□□□□ 0.53
DDB1-218ENST00000540784 TM4SF4P48230 202 aa18.37■□□□□ 0.53
DDB1-218ENST00000540784 TFAP4Q01664 338 aa18.37■□□□□ 0.53
DDB1-218ENST00000540784 RRP12Q5JTH9 1297 aaKnown RBP18.37■□□□□ 0.53
DDB1-218ENST00000540784 KCNH4Q9UQ05 1017 aa18.37■□□□□ 0.53
DDB1-218ENST00000540784 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
DDB1-218ENST00000540784 TRIM75PA6NK02 468 aa18.36■□□□□ 0.53
DDB1-218ENST00000540784 ORC4O43929 436 aa18.36■□□□□ 0.53
DDB1-218ENST00000540784 RANBP6O60518 1105 aaKnown RBP18.36■□□□□ 0.53
DDB1-218ENST00000540784 REC8O95072 547 aa18.36■□□□□ 0.53
DDB1-218ENST00000540784 CETPP11597 493 aa18.36■□□□□ 0.53
DDB1-218ENST00000540784 GUCY1A2P33402 732 aa18.36■□□□□ 0.53
DDB1-218ENST00000540784 SREBF2Q12772 1141 aa18.36■□□□□ 0.53
DDB1-218ENST00000540784 FAM47AQ5JRC9 791 aa18.36■□□□□ 0.53
DDB1-218ENST00000540784 STAG1Q8WVM7 1258 aa18.36■□□□□ 0.53
DDB1-218ENST00000540784 MS4A4AQ96JQ5 239 aa18.36■□□□□ 0.53
DDB1-218ENST00000540784 KANSL2Q9H9L4 492 aa18.36■□□□□ 0.53
DDB1-218ENST00000540784 TACC3Q9Y6A5 838 aa18.36■□□□□ 0.53
DDB1-218ENST00000540784 TESPA1A2RU30 521 aaPredicted RBP18.35■□□□□ 0.53
DDB1-218ENST00000540784 TSPY3P0CV98 308 aa18.35■□□□□ 0.53
DDB1-218ENST00000540784 TSPY8P0CW00 308 aa18.35■□□□□ 0.53
DDB1-218ENST00000540784 MAP2K1Q02750 393 aaPredicted RBP18.35■□□□□ 0.53
DDB1-218ENST00000540784 TBC1D10CQ8IV04 446 aa18.35■□□□□ 0.53
DDB1-218ENST00000540784 NEDD1Q8NHV4 660 aa18.35■□□□□ 0.53
DDB1-218ENST00000540784 NBPF3Q9H094 633 aa18.35■□□□□ 0.53
DDB1-218ENST00000540784 CCL15-CCL14A0A0B4J2E2 113 aa18.34■□□□□ 0.53
DDB1-218ENST00000540784 TSPY2A6NKD2 308 aa18.34■□□□□ 0.53
DDB1-218ENST00000540784 C19orf81C9J6K1 198 aa18.34■□□□□ 0.53
DDB1-218ENST00000540784 USP17L10C9JJH3 530 aa18.34■□□□□ 0.53
DDB1-218ENST00000540784 CYP21A2P08686 494 aa18.34■□□□□ 0.53
DDB1-218ENST00000540784 NECTIN1Q15223 517 aa18.34■□□□□ 0.53
DDB1-218ENST00000540784 CCL15Q16663 113 aa18.34■□□□□ 0.53
DDB1-218ENST00000540784 OTUD7BQ6GQQ9 843 aa18.34■□□□□ 0.53
DDB1-218ENST00000540784 FASTKD5Q7L8L6 764 aaKnown RBP18.34■□□□□ 0.53
DDB1-218ENST00000540784 JMYQ8N9B5 988 aa18.34■□□□□ 0.53
DDB1-218ENST00000540784 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.34■□□□□ 0.53
DDB1-218ENST00000540784 EIF5BO60841 1220 aaKnown RBP18.33■□□□□ 0.52
DDB1-218ENST00000540784 NT5C2P49902 561 aa18.33■□□□□ 0.52
DDB1-218ENST00000540784 BACE1P56817 501 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms