RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ADGRA1Q86SQ6 560 aa9.02□□□□□ -0.97
YBX3-209ENST00000540747 TEX11Q8IYF3 940 aa9.02□□□□□ -0.97
YBX3-209ENST00000540747 TDHQ8IZJ6 230 aa9.02□□□□□ -0.97
YBX3-209ENST00000540747 SOCS4Q8WXH5 440 aa9.02□□□□□ -0.97
YBX3-209ENST00000540747 DHX36Q9H2U1 1008 aaKnown RBP9.02□□□□□ -0.97
YBX3-209ENST00000540747 AS3MTQ9HBK9 375 aa9.02□□□□□ -0.97
YBX3-209ENST00000540747 GINM1Q9NU53 330 aa9.02□□□□□ -0.97
YBX3-209ENST00000540747 MTMR10Q9NXD2 777 aa9.02□□□□□ -0.97
YBX3-209ENST00000540747 PI4KBQ9UBF8 816 aa9.02□□□□□ -0.97
YBX3-209ENST00000540747 STXBP5LQ9Y2K9 1186 aa9.02□□□□□ -0.97
YBX3-209ENST00000540747 EYSQ5T1H1 3165 aa9.02□□□□□ -0.97
YBX3-209ENST00000540747 PRUNE2Q8WUY3 3088 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 FOCADQ5VW36 1801 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 PNMA6EA0A0J9YXQ4 647 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 ASNSP08243 561 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 GNAI3P08754 354 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 SYN1P17600 705 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 CYP2B6P20813 491 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 CACNB2Q08289 660 aaPredicted RBP9.01□□□□□ -0.97
YBX3-209ENST00000540747 Q3C1V9 767 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 Q7L0L9 218 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 DEFB123Q8N688 67 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 GPRC5AQ8NFJ5 357 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 CDK5RAP2Q96SN8 1893 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 PORCNQ9H237 461 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 EMILIN3Q9NT22 766 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 RAI14Q9P0K7 980 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 FLT1P17948 1338 aa9.01□□□□□ -0.97
YBX3-209ENST00000540747 C19orf81C9J6K1 198 aa9□□□□□ -0.97
YBX3-209ENST00000540747 IGSF3O75054 1194 aa9□□□□□ -0.97
YBX3-209ENST00000540747 CNMDO75829 334 aa9□□□□□ -0.97
YBX3-209ENST00000540747 UQCRFS1P1P0C7P4 283 aa9□□□□□ -0.97
YBX3-209ENST00000540747 MAPK4P31152 587 aa9□□□□□ -0.97
YBX3-209ENST00000540747 ERVK-9P63128 1117 aa9□□□□□ -0.97
YBX3-209ENST00000540747 ERVK-24P63145 666 aa9□□□□□ -0.97
YBX3-209ENST00000540747 IRX3P78415 501 aaPredicted RBP9□□□□□ -0.97
YBX3-209ENST00000540747 CCL14Q16627 93 aa9□□□□□ -0.97
YBX3-209ENST00000540747 LRRC26Q2I0M4 334 aa9□□□□□ -0.97
YBX3-209ENST00000540747 FOXP4Q8IVH2 680 aaPredicted RBP9□□□□□ -0.97
YBX3-209ENST00000540747 TRMT44Q8IYL2 757 aaKnown RBP9□□□□□ -0.97
YBX3-209ENST00000540747 GTF3C2Q8WUA4 911 aaPredicted RBP9□□□□□ -0.97
YBX3-209ENST00000540747 ZNF512BQ96KM6 892 aaPredicted RBP9□□□□□ -0.97
YBX3-209ENST00000540747 C12orf42Q96LP6 360 aa9□□□□□ -0.97
YBX3-209ENST00000540747 NEUROD6Q96NK8 337 aa9□□□□□ -0.97
YBX3-209ENST00000540747 APBA2Q99767 749 aa9□□□□□ -0.97
YBX3-209ENST00000540747 NUDT12Q9BQG2 462 aa9□□□□□ -0.97
YBX3-209ENST00000540747 GPR108Q9NPR9 543 aa9□□□□□ -0.97
YBX3-209ENST00000540747 ZBTB21Q9ULJ3 1066 aa9□□□□□ -0.97
YBX3-209ENST00000540747 USP17L10C9JJH3 530 aa8.99□□□□□ -0.97
YBX3-209ENST00000540747 CYP2E1P05181 493 aaPredicted RBP8.99□□□□□ -0.97
YBX3-209ENST00000540747 PLCG2P16885 1265 aa8.99□□□□□ -0.97
YBX3-209ENST00000540747 ZKSCAN1P17029 563 aaPredicted RBP8.99□□□□□ -0.97
YBX3-209ENST00000540747 CCND3P30281 292 aaPredicted RBP8.99□□□□□ -0.97
YBX3-209ENST00000540747 POLA2Q14181 598 aa8.99□□□□□ -0.97
YBX3-209ENST00000540747 DIEXFQ68CQ4 756 aaKnown RBP8.99□□□□□ -0.97
YBX3-209ENST00000540747 FAM109BQ6ICB4 259 aaPredicted RBP8.99□□□□□ -0.97
YBX3-209ENST00000540747 NAA16Q6N069 864 aaPredicted RBP8.99□□□□□ -0.97
YBX3-209ENST00000540747 TATDN1Q6P1N9 297 aa8.99□□□□□ -0.97
YBX3-209ENST00000540747 GPR142Q7Z601 462 aa8.99□□□□□ -0.97
YBX3-209ENST00000540747 MAPKAPK5Q8IW41 473 aa8.99□□□□□ -0.97
YBX3-209ENST00000540747 AATFQ9NY61 560 aaKnown RBP eCLIP8.99□□□□□ -0.97
YBX3-209ENST00000540747 TMOD4Q9NZQ9 345 aa8.99□□□□□ -0.97
YBX3-209ENST00000540747 TNNQ9UQP3 1299 aa8.99□□□□□ -0.97
YBX3-209ENST00000540747 CDH23Q9H251 3354 aa8.99□□□□□ -0.97
YBX3-209ENST00000540747 FRMPD3Q5JV73 1810 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 POTEB2H3BUK9 544 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 GDF11O95390 407 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 BAG3O95817 575 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 HOXC6P09630 235 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 TRIM27P14373 513 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 RGS2P41220 211 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 MAP2K5Q13163 448 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 TNNI3KQ59H18 835 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 LBX2Q6XYB7 198 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 PLEKHH3Q7Z736 793 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 TGFBRAP1Q8WUH2 860 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 DBNDD2Q9BQY9 259 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 UBE2OQ9C0C9 1292 aaKnown RBP8.98□□□□□ -0.97
YBX3-209ENST00000540747 PIH1D3Q9NQM4 214 aaKnown RBP8.98□□□□□ -0.97
YBX3-209ENST00000540747 SNRKQ9NRH2 765 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 FLRT1Q9NZU1 646 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 LRP2BPQ9P2M1 347 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 PALD1Q9ULE6 856 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 RABGAP1Q9Y3P9 1069 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 FPGT-TNNI3KV9GXZ4 949 aa8.98□□□□□ -0.97
YBX3-209ENST00000540747 GNAI2P04899 355 aa8.97□□□□□ -0.97
YBX3-209ENST00000540747 PDE3AQ14432 1141 aa8.97□□□□□ -0.97
YBX3-209ENST00000540747 GORABQ5T7V8 394 aa8.97□□□□□ -0.97
YBX3-209ENST00000540747 USP17L2Q6R6M4 530 aa8.97□□□□□ -0.97
YBX3-209ENST00000540747 SSH3Q8TE77 659 aa8.97□□□□□ -0.97
YBX3-209ENST00000540747 GUCD1Q96NT3 240 aa8.97□□□□□ -0.97
YBX3-209ENST00000540747 EHD4Q9H223 541 aa8.97□□□□□ -0.97
YBX3-209ENST00000540747 MYO5AQ9Y4I1 1855 aaKnown RBP8.97□□□□□ -0.97
YBX3-209ENST00000540747 LTBP2Q14767 1821 aa8.96□□□□□ -0.97
YBX3-209ENST00000540747 ZNF236Q9UL36 1845 aa8.96□□□□□ -0.97
YBX3-209ENST00000540747 SLC15A5A6NIM6 579 aa8.96□□□□□ -0.98
YBX3-209ENST00000540747 GH2P01242 217 aa8.96□□□□□ -0.98
YBX3-209ENST00000540747 PTPREP23469 700 aa8.96□□□□□ -0.98
YBX3-209ENST00000540747 GUCY1A2P33402 732 aa8.96□□□□□ -0.98
YBX3-209ENST00000540747 ZAP70P43403 619 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms