RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 PHC3Q8NDX5 983 aa6.48□□□□□ -1.37
MDM2-227ENST00000540709 GIPC2Q8TF65 315 aa6.48□□□□□ -1.37
MDM2-227ENST00000540709 NOC4LQ9BVI4 516 aaKnown RBP6.48□□□□□ -1.37
MDM2-227ENST00000540709 ZBTB7CA1YPR0 619 aa6.47□□□□□ -1.37
MDM2-227ENST00000540709 IGF2BP3O00425 579 aaKnown RBP eCLIP6.47□□□□□ -1.37
MDM2-227ENST00000540709 PF4P02776 101 aa6.47□□□□□ -1.37
MDM2-227ENST00000540709 RPL6Q02878 288 aaKnown RBP6.47□□□□□ -1.37
MDM2-227ENST00000540709 PDE4BQ07343 736 aa6.47□□□□□ -1.37
MDM2-227ENST00000540709 CAMK2GQ13555 558 aaPredicted RBP6.47□□□□□ -1.37
MDM2-227ENST00000540709 ZNF326Q5BKZ1 582 aaKnown RBP6.47□□□□□ -1.37
MDM2-227ENST00000540709 MFSD2AQ8NA29 543 aa6.47□□□□□ -1.37
MDM2-227ENST00000540709 PRDM7Q9NQW5 492 aa6.47□□□□□ -1.37
MDM2-227ENST00000540709 CORINQ9Y5Q5 1042 aa6.47□□□□□ -1.37
MDM2-227ENST00000540709 PRR33A8MZF0 331 aa6.46□□□□□ -1.38
MDM2-227ENST00000540709 RBAK-RBAKDNI3L0D1 243 aa6.46□□□□□ -1.38
MDM2-227ENST00000540709 CST3P01034 146 aaPredicted RBP6.46□□□□□ -1.38
MDM2-227ENST00000540709 PLCG1P19174 1290 aa6.46□□□□□ -1.38
MDM2-227ENST00000540709 ITGAEP38570 1179 aa6.46□□□□□ -1.38
MDM2-227ENST00000540709 NKPD1Q17RQ9 610 aa6.46□□□□□ -1.38
MDM2-227ENST00000540709 ANGEL2Q5VTE6 544 aaKnown RBP6.46□□□□□ -1.38
MDM2-227ENST00000540709 SPACA3Q8IXA5 215 aa6.46□□□□□ -1.38
MDM2-227ENST00000540709 RC3H2Q9HBD1 1191 aaKnown RBP6.46□□□□□ -1.38
MDM2-227ENST00000540709 TJP2Q9UDY2 1190 aa6.46□□□□□ -1.38
MDM2-227ENST00000540709 CNTNAP4Q9C0A0 1308 aa6.46□□□□□ -1.38
MDM2-227ENST00000540709 FUT4P22083 530 aa6.45□□□□□ -1.38
MDM2-227ENST00000540709 ZP2Q05996 745 aa6.45□□□□□ -1.38
MDM2-227ENST00000540709 SNAP47Q5SQN1 464 aa6.45□□□□□ -1.38
MDM2-227ENST00000540709 TMCO4Q5TGY1 634 aa6.45□□□□□ -1.38
MDM2-227ENST00000540709 WFDC3Q8IUB2 231 aa6.45□□□□□ -1.38
MDM2-227ENST00000540709 ASB11Q8WXH4 323 aa6.45□□□□□ -1.38
MDM2-227ENST00000540709 TMEM87BQ96K49 555 aa6.45□□□□□ -1.38
MDM2-227ENST00000540709 HSPA12BQ96MM6 686 aa6.45□□□□□ -1.38
MDM2-227ENST00000540709 TMEM74Q96NL1 305 aa6.45□□□□□ -1.38
MDM2-227ENST00000540709 BCL11AQ9H165 835 aa6.45□□□□□ -1.38
MDM2-227ENST00000540709 MAPK8IP1Q9UQF2 711 aa6.45□□□□□ -1.38
MDM2-227ENST00000540709 SNX11Q9Y5W9 270 aa6.45□□□□□ -1.38
MDM2-227ENST00000540709 H3BS24 57 aa6.44□□□□□ -1.38
MDM2-227ENST00000540709 GRIN3BO60391 1043 aa6.44□□□□□ -1.38
MDM2-227ENST00000540709 F13A1P00488 732 aa6.44□□□□□ -1.38
MDM2-227ENST00000540709 CYP7A1P22680 504 aa6.44□□□□□ -1.38
MDM2-227ENST00000540709 LMNB2Q03252 620 aa6.44□□□□□ -1.38
MDM2-227ENST00000540709 SLC6A19Q695T7 634 aa6.44□□□□□ -1.38
MDM2-227ENST00000540709 CBLL1Q75N03 491 aa6.44□□□□□ -1.38
MDM2-227ENST00000540709 MFSD4AQ8N468 514 aa6.44□□□□□ -1.38
MDM2-227ENST00000540709 GOLM1Q8NBJ4 401 aa6.44□□□□□ -1.38
MDM2-227ENST00000540709 TNKS2Q9H2K2 1166 aa6.44□□□□□ -1.38
MDM2-227ENST00000540709 ADAMTS6Q9UKP5 1117 aa6.44□□□□□ -1.38
MDM2-227ENST00000540709 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
MDM2-227ENST00000540709 UPK3BL1B0FP48 263 aa6.43□□□□□ -1.38
MDM2-227ENST00000540709 UPK3BL2E5RIL1 263 aa6.43□□□□□ -1.38
MDM2-227ENST00000540709 TLR3O15455 904 aaKnown RBP6.43□□□□□ -1.38
MDM2-227ENST00000540709 RNASE1P07998 156 aaKnown RBP6.43□□□□□ -1.38
MDM2-227ENST00000540709 CAP2P40123 477 aa6.43□□□□□ -1.38
MDM2-227ENST00000540709 TXKP42681 527 aa6.43□□□□□ -1.38
MDM2-227ENST00000540709 PWP1Q13610 501 aa6.43□□□□□ -1.38
MDM2-227ENST00000540709 ZNF746Q6NUN9 644 aaPredicted RBP6.43□□□□□ -1.38
MDM2-227ENST00000540709 FAM13CQ8NE31 585 aa6.43□□□□□ -1.38
MDM2-227ENST00000540709 ACSF2Q96CM8 615 aaPredicted RBP6.43□□□□□ -1.38
MDM2-227ENST00000540709 ASIC4Q96FT7 647 aa6.43□□□□□ -1.38
MDM2-227ENST00000540709 ATP13A1Q9HD20 1204 aa6.43□□□□□ -1.38
MDM2-227ENST00000540709 COPRSQ9NQ92 184 aa6.43□□□□□ -1.38
MDM2-227ENST00000540709 MBNL3Q9NUK0 354 aaKnown RBP6.43□□□□□ -1.38
MDM2-227ENST00000540709 ZSWIM5Q9P217 1185 aa6.43□□□□□ -1.38
MDM2-227ENST00000540709 KLHL3Q9UH77 587 aa6.43□□□□□ -1.38
MDM2-227ENST00000540709 TACC3Q9Y6A5 838 aa6.43□□□□□ -1.38
MDM2-227ENST00000540709 BIN1O00499 593 aa6.42□□□□□ -1.38
MDM2-227ENST00000540709 TNNI2P48788 182 aa6.42□□□□□ -1.38
MDM2-227ENST00000540709 CLCN7P51798 805 aa6.42□□□□□ -1.38
MDM2-227ENST00000540709 MCATQ8IVS2 390 aaKnown RBP6.42□□□□□ -1.38
MDM2-227ENST00000540709 MRPL41Q8IXM3 137 aaKnown RBP6.42□□□□□ -1.38
MDM2-227ENST00000540709 LRRN4CLQ8ND94 238 aa6.42□□□□□ -1.38
MDM2-227ENST00000540709 GATAD2BQ8WXI9 593 aa6.42□□□□□ -1.38
MDM2-227ENST00000540709 RSRP1Q9BUV0 290 aa6.42□□□□□ -1.38
MDM2-227ENST00000540709 KBTBD4Q9NVX7 518 aa6.42□□□□□ -1.38
MDM2-227ENST00000540709 BTBD11A6QL63 1104 aa6.41□□□□□ -1.38
MDM2-227ENST00000540709 CILPO75339 1184 aa6.41□□□□□ -1.38
MDM2-227ENST00000540709 JUNBP17275 347 aaPredicted RBP6.41□□□□□ -1.38
MDM2-227ENST00000540709 CCDC84Q86UT8 332 aaPredicted RBP6.41□□□□□ -1.38
MDM2-227ENST00000540709 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
MDM2-227ENST00000540709 FBXO27Q8NI29 283 aa6.41□□□□□ -1.38
MDM2-227ENST00000540709 UBE2FQ969M7 185 aa6.41□□□□□ -1.38
MDM2-227ENST00000540709 CARS2Q9HA77 564 aaKnown RBP6.41□□□□□ -1.38
MDM2-227ENST00000540709 GGT7Q9UJ14 662 aa6.41□□□□□ -1.38
MDM2-227ENST00000540709 PITPNM2Q9BZ72 1349 aa6.41□□□□□ -1.38
MDM2-227ENST00000540709 FAM221AA4D161 298 aa6.4□□□□□ -1.38
MDM2-227ENST00000540709 YARSP54577 528 aaKnown RBP6.4□□□□□ -1.38
MDM2-227ENST00000540709 CHMP4BP1P59074 171 aa6.4□□□□□ -1.38
MDM2-227ENST00000540709 SLC23A3Q6PIS1 610 aa6.4□□□□□ -1.38
MDM2-227ENST00000540709 REV1Q9UBZ9 1251 aa6.4□□□□□ -1.38
MDM2-227ENST00000540709 ADAM30Q9UKF2 790 aa6.4□□□□□ -1.38
MDM2-227ENST00000540709 ZNF865P0CJ78 1059 aaPredicted RBP6.39□□□□□ -1.39
MDM2-227ENST00000540709 ETV3P41162 512 aa6.39□□□□□ -1.39
MDM2-227ENST00000540709 TMEM87AQ8NBN3 555 aa6.39□□□□□ -1.39
MDM2-227ENST00000540709 RHOVQ96L33 236 aa6.39□□□□□ -1.39
MDM2-227ENST00000540709 SEMA3GQ9NS98 782 aa6.39□□□□□ -1.39
MDM2-227ENST00000540709 CEP131Q9UPN4 1083 aa6.39□□□□□ -1.39
MDM2-227ENST00000540709 CAPN6Q9Y6Q1 641 aa6.39□□□□□ -1.39
MDM2-227ENST00000540709 CHURC1-FNTBB4DL54 471 aa6.38□□□□□ -1.39
MDM2-227ENST00000540709 PAPLNO95428 1278 aa6.38□□□□□ -1.39
MDM2-227ENST00000540709 ITGB5P18084 799 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms